© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|415 |
| Gene name | |
| Location | Contig_1081:3507..5581 |
| Strand | - |
| Gene length (bp) | 2074 |
| Transcript length (bp) | 1689 |
| Coding sequence length (bp) | 1689 |
| Protein length (aa) | 563 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.5E-36 | 26 | 494 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 7.4E-09 | 35 | 171 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 17 | 546 | 1.0E-69 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 31 | 502 | 6.0E-39 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 6 | 502 | 2.0E-36 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 39 | 259 | 3.0E-29 |
| sp|B4EYY4|MDTG_PROMH | Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 | 21 | 250 | 2.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 17 | 546 | 1.0E-69 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 31 | 502 | 6.0E-39 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 6 | 502 | 2.0E-36 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 39 | 259 | 3.0E-29 |
| sp|B4EYY4|MDTG_PROMH | Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 | 21 | 250 | 2.0E-09 |
| sp|D8MQN9|MDTG_ERWBE | Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 | 21 | 175 | 6.0E-09 |
| sp|P02982|TCR1_ECOLX | Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 | 19 | 172 | 2.0E-08 |
| sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 62 | 174 | 4.0E-08 |
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 62 | 174 | 2.0E-07 |
| sp|P51564|TCR8_PASMD | Tetracycline resistance protein, class H OS=Pasteurella multocida GN=tetA PE=3 SV=1 | 31 | 185 | 4.0E-07 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 40 | 172 | 5.0E-07 |
| sp|P51563|TCR7_VIBAN | Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1 | 57 | 231 | 9.0E-07 |
| sp|A8GCZ5|MDTG_SERP5 | Multidrug resistance protein MdtG OS=Serratia proteamaculans (strain 568) GN=mdtG PE=3 SV=1 | 36 | 175 | 1.0E-06 |
| sp|P02981|TCR3_ECOLX | Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1 | 56 | 184 | 2.0E-06 |
| sp|Q6GIU7|NORA_STAAR | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MRSA252) GN=norA PE=3 SV=1 | 65 | 185 | 3.0E-06 |
| sp|Q9HE13|YI32_SCHPO | Uncharacterized MFS-type transporter C1399.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1399.02 PE=3 SV=1 | 67 | 176 | 3.0E-06 |
| sp|P40760|YUXJ_BACSU | Uncharacterized MFS-type transporter YuxJ OS=Bacillus subtilis (strain 168) GN=yuxJ PE=3 SV=3 | 40 | 248 | 3.0E-06 |
| sp|Q10072|YAN6_SCHPO | Uncharacterized transporter C3H1.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.06c PE=3 SV=1 | 67 | 176 | 4.0E-06 |
| sp|Q5HHX4|NORA_STAAC | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain COL) GN=norA PE=3 SV=1 | 65 | 185 | 4.0E-06 |
| sp|P0A0J6|NORA_STAAW | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MW2) GN=norA PE=3 SV=1 | 65 | 185 | 5.0E-06 |
| sp|P0A0J7|NORA_STAAU | Quinolone resistance protein NorA OS=Staphylococcus aureus GN=norA PE=3 SV=1 | 65 | 185 | 5.0E-06 |
| sp|P0A0J5|NORA_STAAN | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain N315) GN=norA PE=3 SV=1 | 65 | 185 | 5.0E-06 |
| sp|P0A0J4|NORA_STAAM | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=norA PE=3 SV=1 | 65 | 185 | 5.0E-06 |
| sp|Q6GBD5|NORA_STAAS | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MSSA476) GN=norA PE=3 SV=1 | 65 | 185 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 23 | 45 | 22 |
| 2 | 60 | 82 | 22 |
| 3 | 94 | 113 | 19 |
| 4 | 123 | 145 | 22 |
| 5 | 152 | 174 | 22 |
| 6 | 196 | 218 | 22 |
| 7 | 330 | 347 | 17 |
| 8 | 382 | 404 | 22 |
| 9 | 411 | 433 | 22 |
| 10 | 443 | 465 | 22 |
| 11 | 510 | 532 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|415 MSPAPARPGKAARPTPAFPTQQMFVLACCRICEPIAFMSIFPYIYYMIEDFHITDDSSQISVYAGMVTSAFTLAE FATGVMWGRLSDKIGRKPVLLTGLVGTALSVLVFGFAPSLPVALLARALGGLLNGNIGVLQTTVAELVTVREQQP RAYTIMPMVWCIGSIIGPMIGGALARPCISYPQLFPRGTIWDRYPYLLPNLFSAATVFVGVIVGFLFLDETHAAK TMQPDRGRDLGRRIAALFHRAAVCKGRARTVEKEGLLAIDAADAKYGTLSGAGMADMDEPLPAYQSRENSPKLAP RDAPEPAAAAASRRPGPGSSERPKTFTKPVILNIMSYGILAFHTMTFDQLFPVFLSTSPLEHPVVELPLKFADGF GLDTKTIGIVMSVQGVYSLLSNYVIVPPVTRRLGSLRLFRLLAFSYFALYLVTPYLVLLPASLRMPAVYMLVIWK CTYATMAYPNNAILLANAAPNKQVLGTINGIAASTASLCRALGPTLSGILYAMGLRTGYSGLAWWFSGLVTIAGA YLSSQITESGGPPMVSDDEDEEALLDESLLYSEDEAA* |
| Coding | >Hirsu2|415 ATGTCGCCCGCCCCGGCCCGCCCCGGCAAGGCGGCTCGCCCGACGCCCGCCTTCCCGACCCAGCAGATGTTTGTT CTAGCCTGCTGCCGGATATGCGAGCCCATCGCCTTCATGTCCATCTTCCCCTACATCTACTACATGATTGAGGAC TTCCACATCACCGACGACTCCAGCCAAATCTCCGTCTACGCCGGCATGGTCACCTCGGCCTTCACCTTGGCCGAA TTCGCTACCGGCGTCATGTGGGGGAGGCTGAGCGACAAGATCGGCCGCAAGCCCGTCCTCCTCACCGGCCTCGTG GGAACCGCCCTCAGCGTCCTGGTCTTTGGCTTCGCCCCGAGCCTGCCCGTCGCCCTCTTGGCCCGCGCTCTCGGC GGTCTGCTCAATGGAAACATCGGTGTGCTGCAGACGACCGTCGCCGAGCTGGTGACTGTGAGGGAGCAGCAGCCT CGCGCTTACACCATCATGCCCATGGTCTGGTGCATCGGCTCCATCATCGGCCCCATGATCGGCGGCGCCCTGGCC CGGCCGTGCATCAGCTACCCCCAGCTGTTTCCCCGCGGCACCATCTGGGACCGGTATCCCTATCTGCTGCCCAAC CTTTTCAGCGCCGCCACCGTCTTCGTCGGCGTCATCGTCGGCTTCCTCTTCCTGGACGAGACGCATGCCGCCAAG ACGATGCAGCCCGACCGCGGCCGGGACCTCGGCCGCCGCATCGCCGCCCTCTTCCACCGCGCCGCCGTCTGCAAG GGCCGAGCCCGGACCGTCGAGAAGGAGGGCCTGCTCGCCATCGACGCGGCCGACGCCAAATACGGCACCCTGTCC GGCGCCGGCATGGCCGACATGGACGAGCCGCTGCCTGCCTATCAGAGCCGGGAGAACTCGCCCAAGCTGGCCCCG CGGGACGCCCCGGAGCCCGCCGCCGCCGCCGCCTCCCGACGCCCCGGTCCGGGGTCGAGCGAGCGGCCCAAGACC TTCACCAAGCCCGTCATCCTCAACATCATGTCCTATGGCATCCTGGCATTCCACACCATGACCTTCGACCAGCTG TTCCCCGTCTTCTTGAGCACCTCGCCGCTGGAGCACCCCGTCGTCGAGCTGCCCCTCAAGTTCGCCGACGGCTTC GGCCTCGACACCAAGACGATCGGCATCGTCATGTCCGTCCAGGGCGTCTACTCGCTCCTGTCCAACTACGTCATC GTCCCGCCCGTGACGAGGCGGCTGGGCTCGCTCCGGCTGTTCCGCCTCTTGGCCTTTTCCTACTTCGCCCTCTAC CTCGTCACGCCCTACCTGGTCCTGCTGCCGGCCAGCCTCCGGATGCCGGCCGTCTACATGCTCGTCATCTGGAAG TGCACCTACGCGACCATGGCGTACCCCAACAACGCCATCCTGCTCGCCAACGCGGCGCCCAACAAGCAGGTGCTC GGGACCATCAACGGCATCGCCGCGTCGACGGCCAGCCTCTGCCGAGCGCTCGGCCCCACGCTGTCCGGCATCCTG TACGCCATGGGCCTGCGGACGGGTTACTCGGGCCTCGCCTGGTGGTTCAGCGGGCTCGTCACCATCGCCGGCGCC TACCTGAGCTCCCAGATCACGGAGAGCGGCGGCCCGCCCATGGTGTCGGACGACGAGGACGAGGAGGCGCTGCTG GACGAATCGCTCCTCTACAGCGAAGACGAGGCCGCCTGA |
| Transcript | >Hirsu2|415 ATGTCGCCCGCCCCGGCCCGCCCCGGCAAGGCGGCTCGCCCGACGCCCGCCTTCCCGACCCAGCAGATGTTTGTT CTAGCCTGCTGCCGGATATGCGAGCCCATCGCCTTCATGTCCATCTTCCCCTACATCTACTACATGATTGAGGAC TTCCACATCACCGACGACTCCAGCCAAATCTCCGTCTACGCCGGCATGGTCACCTCGGCCTTCACCTTGGCCGAA TTCGCTACCGGCGTCATGTGGGGGAGGCTGAGCGACAAGATCGGCCGCAAGCCCGTCCTCCTCACCGGCCTCGTG GGAACCGCCCTCAGCGTCCTGGTCTTTGGCTTCGCCCCGAGCCTGCCCGTCGCCCTCTTGGCCCGCGCTCTCGGC GGTCTGCTCAATGGAAACATCGGTGTGCTGCAGACGACCGTCGCCGAGCTGGTGACTGTGAGGGAGCAGCAGCCT CGCGCTTACACCATCATGCCCATGGTCTGGTGCATCGGCTCCATCATCGGCCCCATGATCGGCGGCGCCCTGGCC CGGCCGTGCATCAGCTACCCCCAGCTGTTTCCCCGCGGCACCATCTGGGACCGGTATCCCTATCTGCTGCCCAAC CTTTTCAGCGCCGCCACCGTCTTCGTCGGCGTCATCGTCGGCTTCCTCTTCCTGGACGAGACGCATGCCGCCAAG ACGATGCAGCCCGACCGCGGCCGGGACCTCGGCCGCCGCATCGCCGCCCTCTTCCACCGCGCCGCCGTCTGCAAG GGCCGAGCCCGGACCGTCGAGAAGGAGGGCCTGCTCGCCATCGACGCGGCCGACGCCAAATACGGCACCCTGTCC GGCGCCGGCATGGCCGACATGGACGAGCCGCTGCCTGCCTATCAGAGCCGGGAGAACTCGCCCAAGCTGGCCCCG CGGGACGCCCCGGAGCCCGCCGCCGCCGCCGCCTCCCGACGCCCCGGTCCGGGGTCGAGCGAGCGGCCCAAGACC TTCACCAAGCCCGTCATCCTCAACATCATGTCCTATGGCATCCTGGCATTCCACACCATGACCTTCGACCAGCTG TTCCCCGTCTTCTTGAGCACCTCGCCGCTGGAGCACCCCGTCGTCGAGCTGCCCCTCAAGTTCGCCGACGGCTTC GGCCTCGACACCAAGACGATCGGCATCGTCATGTCCGTCCAGGGCGTCTACTCGCTCCTGTCCAACTACGTCATC GTCCCGCCCGTGACGAGGCGGCTGGGCTCGCTCCGGCTGTTCCGCCTCTTGGCCTTTTCCTACTTCGCCCTCTAC CTCGTCACGCCCTACCTGGTCCTGCTGCCGGCCAGCCTCCGGATGCCGGCCGTCTACATGCTCGTCATCTGGAAG TGCACCTACGCGACCATGGCGTACCCCAACAACGCCATCCTGCTCGCCAACGCGGCGCCCAACAAGCAGGTGCTC GGGACCATCAACGGCATCGCCGCGTCGACGGCCAGCCTCTGCCGAGCGCTCGGCCCCACGCTGTCCGGCATCCTG TACGCCATGGGCCTGCGGACGGGTTACTCGGGCCTCGCCTGGTGGTTCAGCGGGCTCGTCACCATCGCCGGCGCC TACCTGAGCTCCCAGATCACGGAGAGCGGCGGCCCGCCCATGGTGTCGGACGACGAGGACGAGGAGGCGCTGCTG GACGAATCGCTCCTCTACAGCGAAGACGAGGCCGCCTGA |
| Gene | >Hirsu2|415 ATGTCGCCCGCCCCGGCCCGCCCCGGCAAGGCGGCTCGCCCGACGCCCGCCTTCCCGACCCAGCAGATGTTTGTT CTAGGTACGAGGTCGCTGTCCGCCGCCGTCGCCCGCGCCGCTGACCTCGCCAGCCTGCTGCCGGATATGCGAGCC CATCGCCTTCATGTCCATCTTCCCCTACATCTACTACATGATTGAGGACTTCCACATCACCGACGACTCCAGCCA AATCTCCGTCTACGCCGGCATGGTCACCTCGGCCTTCACCTTGGCCGAATTCGCTACCGGCGTCATGTGGGGGAG GCTGAGCGACAAGATCGGCCGCAAGCCCGTCCTCCTCACCGGCCTCGTGGGAACCGCCCTCAGCGTCCTGGTCTT TGGCTTCGCCCCGAGCCTGCCCGTCGCCCTCTTGGCCCGCGCTCTCGGCGGTCTGCTCAATGGGTACGCTCAGCG CCTCAATCGGCTGCCTTGCCGCCTCCCCGATCCACCCCCGACCCCATCCCGGGCCCGCTGACCTTGGCTCCCCAG AAACATCGGTGTGCTGCAGACGACCGTCGCCGAGCTGGTGACTGTGAGGGAGCAGCAGCGTGAGTCTCTCCCGGG GCTGGATCGGGACGGCCACCTTTTTTCCCCGTCTTCTTTTCCGGCCTGCCCAACCGCGCATCCGGTCCACTGACA CGCTGCCGCAGCTCGCGCTTACACCATCATGCCCATGGTCTGGTGCATCGGGTACGTCTTCCCGACCACACGGCC TGCTACCACTCTCGTGCTCATCGCGTGCAGCTCCATCATCGGCCCCATGATCGGCGGCGCCCTGGCCCGGCCGTG CATCAGCTACCCCCAGCTGTTTCCCCGCGGCACCATCTGGGACCGGTATCCCTATCTGCTGCCCAACCTTTTCAG CGCCGCCACCGTCTTCGTCGGCGTCATCGTCGGCTTCCTCTTCCTGGACGAGACGCATGCCGCCAAGACGATGCA GCCCGACCGCGGCCGGGACCTCGGCCGCCGCATCGCCGCCCTCTTCCACCGCGCCGCCGTCTGCAAGGGCCGAGC CCGGACCGTCGAGAAGGAGGGCCTGCTCGCCATCGACGCGGCCGACGCCAAATACGGCACCCTGTCCGGCGCCGG CATGGCCGACATGGACGAGCCGCTGCCTGCCTATCAGAGCCGGGAGAACTCGCCCAAGCTGGCCCCGCGGGACGC CCCGGAGCCCGCCGCCGCCGCCGCCTCCCGACGCCCCGGTCCGGGGTCGAGCGAGCGGCCCAAGACCTTCACCAA GCCCGTCATCCTCAACATCATGTCCTATGGCATCCTGGCATTGTGCGTCCCTTTCCCTCGCGCCCGCTCCGAAAT GCTCCCCCCTCCTGCCGCCCCACCCGCCGCGTGCCGTGACTAACGGGCGAGAGACGCCAGCCACACCATGACCTT CGACCAGCTGTTCCCCGTCTTCTTGAGCACCTCGCCGCTGGAGCACCCCGTCGTCGAGCTGCCCCTCAAGTTCGC CGACGGCTTCGGCCTCGACACCAAGACGATCGGCATCGTCATGTCCGTCCAGGGCGTCTACTCGCTCCTGTCCAA CTACGTCATCGTCCCGCCCGTGACGAGGCGGCTGGGCTCGCTCCGGCTGTTCCGCCTCTTGGCCTTTTCCTACTT CGCCCTCTACCTCGTCACGCCCTACCTGGTCCTGCTGCCGGCCAGCCTCCGGATGCCGGCCGTCTACATGCTCGT CATCTGGAAGTGCACCTACGCGACCATGGCGTACCCCAACAACGCCATCCTGCTCGCCAACGCGGCGCCCAACAA GCAGGTGCTCGGGACCATCAACGGCATCGCCGCGTCGACGGCCAGCCTCTGCCGAGCGCTCGGCCCCACGCTGTC CGGCATCCTGTACGCCATGGGCCTGCGGACGGGTTACTCGGGCCTCGCCTGGTGGTTCAGCGGGCTCGTCACCAT CGCCGGCGCCTACCTGAGCTCCCAGATCACGGAGAGCGGCGGCCCGCCCATGGTGTCGGACGACGAGGACGAGGA GGCGCTGCTGGACGAATCGCTCCTCTACAGCGAAGACGAGGCCGCCTGA |