Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4148
Gene name
LocationContig_214:10627..12419
Strand+
Gene length (bp)1792
Transcript length (bp)1611
Coding sequence length (bp)1611
Protein length (aa) 537

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02913 FAD-oxidase_C FAD linked oxidases, C-terminal domain 4.7E-63 284 534
PF01565 FAD_binding_4 FAD binding domain 2.9E-35 109 244

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P46681|DLD2_YEAST D-lactate dehydrogenase [cytochrome] 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD2 PE=1 SV=1 18 536 0.0E+00
sp|Q9C1X2|YN53_SCHPO Putative D-lactate dehydrogenase C713.03, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC713.03 PE=3 SV=1 40 536 0.0E+00
sp|P39976|DLD3_YEAST D-lactate dehydrogenase [cytochrome] 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD3 PE=1 SV=1 41 536 0.0E+00
sp|A1L258|D2HDH_DANRE D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Danio rerio GN=d2hgdh PE=2 SV=1 57 536 3.0E-174
sp|O23240|D2HDH_ARATH D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=D2HGDH PE=1 SV=3 51 536 4.0E-171
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Swissprot ID Swissprot Description Start End E-value
sp|P46681|DLD2_YEAST D-lactate dehydrogenase [cytochrome] 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD2 PE=1 SV=1 18 536 0.0E+00
sp|Q9C1X2|YN53_SCHPO Putative D-lactate dehydrogenase C713.03, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC713.03 PE=3 SV=1 40 536 0.0E+00
sp|P39976|DLD3_YEAST D-lactate dehydrogenase [cytochrome] 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD3 PE=1 SV=1 41 536 0.0E+00
sp|A1L258|D2HDH_DANRE D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Danio rerio GN=d2hgdh PE=2 SV=1 57 536 3.0E-174
sp|O23240|D2HDH_ARATH D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=D2HGDH PE=1 SV=3 51 536 4.0E-171
sp|B8B7X6|D2HDH_ORYSI Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. indica GN=D2HGDH PE=3 SV=1 51 536 2.0E-170
sp|Q8N465|D2HDH_HUMAN D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=D2HGDH PE=1 SV=3 11 536 4.0E-170
sp|Q7XI14|D2HDH_ORYSJ Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=D2HGDH PE=3 SV=1 51 536 1.0E-169
sp|Q1JPD3|D2HDH_BOVIN D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=D2HGDH PE=2 SV=2 33 536 1.0E-166
sp|Q8CIM3|D2HDH_MOUSE D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=D2hgdh PE=1 SV=3 26 536 2.0E-165
sp|P84850|D2HDH_RAT D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=D2hgdh PE=3 SV=1 26 536 2.0E-165
sp|P32891|DLD1_YEAST D-lactate dehydrogenase [cytochrome] 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD1 PE=1 SV=2 87 534 1.0E-47
sp|P94535|GLCD_BACSU Glycolate oxidase subunit GlcD OS=Bacillus subtilis (strain 168) GN=glcD PE=3 SV=1 88 534 4.0E-46
sp|Q94AX4|DLD_ARATH D-lactate dehydrogenase [cytochrome], mitochondrial OS=Arabidopsis thaliana GN=DLD PE=1 SV=1 53 536 5.0E-41
sp|Q12627|DLD1_KLULA D-lactate dehydrogenase [cytochrome], mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DLD1 PE=3 SV=2 89 534 3.0E-39
sp|P0AEP9|GLCD_ECOLI Glycolate oxidase subunit GlcD OS=Escherichia coli (strain K12) GN=glcD PE=3 SV=1 99 536 2.0E-37
sp|P0AEQ0|GLCD_ECOL6 Glycolate oxidase subunit GlcD OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=glcD PE=3 SV=1 99 536 2.0E-37
sp|P9WIT1|Y2280_MYCTU Uncharacterized FAD-linked oxidoreductase Rv2280 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2280 PE=1 SV=1 94 532 2.0E-36
sp|P9WIT0|Y2280_MYCTO Uncharacterized FAD-linked oxidoreductase MT2338 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2338 PE=3 SV=1 94 532 2.0E-36
sp|Q86WU2|LDHD_HUMAN Probable D-lactate dehydrogenase, mitochondrial OS=Homo sapiens GN=LDHD PE=1 SV=1 111 536 1.0E-35
sp|O29853|DLD_ARCFU D-lactate dehydrogenase (acceptor) OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=dld PE=1 SV=1 110 536 3.0E-32
sp|Q7TNG8|LDHD_MOUSE Probable D-lactate dehydrogenase, mitochondrial OS=Mus musculus GN=Ldhd PE=1 SV=1 111 536 7.0E-31
sp|P77748|YDIJ_ECOLI Uncharacterized protein YdiJ OS=Escherichia coli (strain K12) GN=ydiJ PE=3 SV=1 111 534 7.0E-19
sp|Q9V778|ADAS_DROME Alkyldihydroxyacetonephosphate synthase OS=Drosophila melanogaster GN=CG10253 PE=2 SV=1 100 335 2.0E-16
sp|Q8X7S0|YGCU_ECO57 Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli O157:H7 GN=ygcU PE=3 SV=1 111 531 1.0E-15
sp|P97275|ADAS_CAVPO Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia porcellus GN=AGPS PE=1 SV=1 110 530 1.0E-15
sp|Q46911|YGCU_ECOLI Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli (strain K12) GN=ygcU PE=3 SV=4 111 531 3.0E-15
sp|Q8C0I1|ADAS_MOUSE Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus GN=Agps PE=1 SV=1 110 346 1.0E-14
sp|O00116|ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens GN=AGPS PE=1 SV=1 110 346 1.0E-14
sp|Q9EQR2|ADAS_RAT Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus GN=Agps PE=2 SV=1 110 346 2.0E-14
sp|O45218|ADAS_CAEEL Alkyldihydroxyacetonephosphate synthase OS=Caenorhabditis elegans GN=ads-1 PE=2 SV=1 110 530 3.0E-14
sp|Q57252|Y1163_HAEIN Uncharacterized protein HI_1163 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1163 PE=1 SV=1 104 534 4.0E-14
sp|O96759|ADAS_DICDI Alkyldihydroxyacetonephosphate synthase OS=Dictyostelium discoideum GN=eapA PE=1 SV=1 110 315 9.0E-13
sp|O97157|ADAS_TRYBB Alkyldihydroxyacetonephosphate synthase OS=Trypanosoma brucei brucei PE=3 SV=1 38 304 9.0E-11
sp|Q90YK3|GGLO_SCYTO L-gulonolactone oxidase OS=Scyliorhinus torazame GN=GULO PE=2 SV=1 98 305 3.0E-06
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0055114 oxidation-reduction process Yes
GO:0003824 catalytic activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:1901265 nucleoside phosphate binding No
GO:0050662 coenzyme binding No
GO:0005488 binding No
GO:0043168 anion binding No
GO:0003674 molecular_function No
GO:0097159 organic cyclic compound binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No
GO:0036094 small molecule binding No
GO:0008150 biological_process No
GO:0048037 cofactor binding No
GO:1901363 heterocyclic compound binding No
GO:0008152 metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4148
MPATAAPTLRAAAAAAAASRTLATSASRPFAHSVGGRRIRAQLTADTYPGLRRDERFARLTGEHVAYFRRLLGDG
GSAVVSDVDGDGDAQADLDAFNEDWMHKYRGQCRLVLRPASTDHVSQILRYCNEKLLAVVPQGGNTGLVGGSVPV
FDEIVVSMARMNRIHSFDEASGCLVLDAGCILEVADQYLEQRGHIFPLDLGAKGSCQVGGNVATNAGGLRLLRYG
SLHGSVLGMEAVLPDGTVMDDLGTLRKNNTGYDLKQLFIGAEGTLGVITRLAVHCPQRPPAVNVALLGLDSYDKA
LRAFREAKGRLSEILSAFELMDGRSLQMVQAVRREARPLEGEHPFYCLVETSGSDGDHDGDKLDRFLERVMADDV
VADGVVAQDATQAKTLWSWREGVPECVGHWGGVYKYDVSIPLPCMYSLVDDVRARLDAAGLAGDSDQHPVVGVVG
YGHMGDSNLHLNVATRRYDKQVEQALEPYVYEWIERHRGSISAEHGLGLAKRDYVGYSRGTTMVALMKQIKRLYD
PNRIMNPYKYI*
Coding >Hirsu2|4148
ATGCCGGCGACAGCCGCACCGACGCTCAGGGCGGCTGCCGCGGCTGCCGCGGCCTCCCGCACTCTCGCGACGTCG
GCCTCCCGGCCCTTCGCCCACTCCGTGGGGGGGCGGAGGATCCGGGCGCAGCTCACCGCCGACACGTACCCGGGG
CTGCGACGGGACGAGCGGTTCGCCAGGCTCACGGGCGAGCACGTCGCCTACTTCAGGCGTCTGCTGGGCGACGGC
GGGTCGGCCGTCGTGTCCGACGTCGACGGCGACGGCGACGCCCAGGCCGACCTGGACGCCTTCAACGAGGACTGG
ATGCACAAGTACCGCGGCCAGTGCCGGCTGGTGCTCAGGCCGGCCTCGACGGACCACGTCAGCCAGATCCTGCGT
TACTGCAACGAGAAGCTGCTGGCGGTGGTGCCGCAGGGCGGCAACACGGGCCTGGTGGGCGGCTCGGTGCCCGTC
TTCGACGAGATCGTCGTCAGCATGGCGCGCATGAACCGCATCCACTCCTTCGACGAGGCCAGCGGCTGCCTCGTC
CTCGACGCCGGCTGCATCCTCGAGGTGGCCGACCAGTACCTCGAGCAGAGGGGCCACATCTTCCCGCTCGACCTC
GGGGCCAAGGGCTCGTGCCAGGTCGGCGGCAACGTGGCGACCAACGCCGGCGGCCTCCGCCTCCTCCGCTACGGC
AGCCTGCACGGCAGCGTGCTCGGCATGGAGGCGGTGCTGCCGGACGGCACCGTCATGGACGACCTGGGCACGCTG
CGCAAGAACAACACGGGCTACGACCTCAAGCAGCTCTTCATCGGCGCCGAGGGCACGCTCGGCGTCATCACCCGG
CTGGCCGTCCACTGCCCGCAGCGGCCGCCGGCCGTCAACGTCGCCCTGCTCGGGCTCGACTCGTACGACAAGGCG
CTGCGCGCCTTCCGCGAGGCCAAGGGCCGCCTGTCCGAGATCCTGTCCGCCTTCGAGCTCATGGACGGCCGCAGC
CTGCAGATGGTGCAGGCGGTGCGGCGCGAGGCGCGCCCGCTCGAGGGCGAGCACCCCTTCTACTGCCTCGTCGAG
ACGAGCGGCTCCGACGGCGACCACGACGGCGACAAGCTCGACCGCTTCCTCGAGCGCGTCATGGCCGACGACGTC
GTCGCCGACGGCGTCGTCGCCCAGGACGCCACCCAGGCCAAGACGCTGTGGAGCTGGCGCGAGGGCGTGCCCGAG
TGCGTCGGCCACTGGGGCGGCGTGTACAAGTACGACGTCTCGATCCCGCTCCCCTGCATGTACTCGCTCGTCGAC
GACGTCCGGGCCCGCCTGGACGCGGCGGGCCTCGCCGGCGACTCGGACCAGCATCCGGTTGTCGGCGTCGTCGGC
TACGGCCACATGGGCGACTCCAACCTGCACCTCAACGTCGCCACGCGCCGCTACGACAAGCAGGTCGAGCAGGCG
CTGGAGCCGTACGTCTACGAATGGATCGAGCGCCACCGCGGCAGCATCAGCGCCGAGCACGGCCTGGGCCTCGCC
AAGCGCGACTACGTCGGCTACAGCAGGGGCACCACCATGGTCGCCCTGATGAAGCAGATCAAGCGTCTGTATGAT
CCGAATCGCATCATGAACCCGTACAAGTACATCTAA
Transcript >Hirsu2|4148
ATGCCGGCGACAGCCGCACCGACGCTCAGGGCGGCTGCCGCGGCTGCCGCGGCCTCCCGCACTCTCGCGACGTCG
GCCTCCCGGCCCTTCGCCCACTCCGTGGGGGGGCGGAGGATCCGGGCGCAGCTCACCGCCGACACGTACCCGGGG
CTGCGACGGGACGAGCGGTTCGCCAGGCTCACGGGCGAGCACGTCGCCTACTTCAGGCGTCTGCTGGGCGACGGC
GGGTCGGCCGTCGTGTCCGACGTCGACGGCGACGGCGACGCCCAGGCCGACCTGGACGCCTTCAACGAGGACTGG
ATGCACAAGTACCGCGGCCAGTGCCGGCTGGTGCTCAGGCCGGCCTCGACGGACCACGTCAGCCAGATCCTGCGT
TACTGCAACGAGAAGCTGCTGGCGGTGGTGCCGCAGGGCGGCAACACGGGCCTGGTGGGCGGCTCGGTGCCCGTC
TTCGACGAGATCGTCGTCAGCATGGCGCGCATGAACCGCATCCACTCCTTCGACGAGGCCAGCGGCTGCCTCGTC
CTCGACGCCGGCTGCATCCTCGAGGTGGCCGACCAGTACCTCGAGCAGAGGGGCCACATCTTCCCGCTCGACCTC
GGGGCCAAGGGCTCGTGCCAGGTCGGCGGCAACGTGGCGACCAACGCCGGCGGCCTCCGCCTCCTCCGCTACGGC
AGCCTGCACGGCAGCGTGCTCGGCATGGAGGCGGTGCTGCCGGACGGCACCGTCATGGACGACCTGGGCACGCTG
CGCAAGAACAACACGGGCTACGACCTCAAGCAGCTCTTCATCGGCGCCGAGGGCACGCTCGGCGTCATCACCCGG
CTGGCCGTCCACTGCCCGCAGCGGCCGCCGGCCGTCAACGTCGCCCTGCTCGGGCTCGACTCGTACGACAAGGCG
CTGCGCGCCTTCCGCGAGGCCAAGGGCCGCCTGTCCGAGATCCTGTCCGCCTTCGAGCTCATGGACGGCCGCAGC
CTGCAGATGGTGCAGGCGGTGCGGCGCGAGGCGCGCCCGCTCGAGGGCGAGCACCCCTTCTACTGCCTCGTCGAG
ACGAGCGGCTCCGACGGCGACCACGACGGCGACAAGCTCGACCGCTTCCTCGAGCGCGTCATGGCCGACGACGTC
GTCGCCGACGGCGTCGTCGCCCAGGACGCCACCCAGGCCAAGACGCTGTGGAGCTGGCGCGAGGGCGTGCCCGAG
TGCGTCGGCCACTGGGGCGGCGTGTACAAGTACGACGTCTCGATCCCGCTCCCCTGCATGTACTCGCTCGTCGAC
GACGTCCGGGCCCGCCTGGACGCGGCGGGCCTCGCCGGCGACTCGGACCAGCATCCGGTTGTCGGCGTCGTCGGC
TACGGCCACATGGGCGACTCCAACCTGCACCTCAACGTCGCCACGCGCCGCTACGACAAGCAGGTCGAGCAGGCG
CTGGAGCCGTACGTCTACGAATGGATCGAGCGCCACCGCGGCAGCATCAGCGCCGAGCACGGCCTGGGCCTCGCC
AAGCGCGACTACGTCGGCTACAGCAGGGGCACCACCATGGTCGCCCTGATGAAGCAGATCAAGCGTCTGTATGAT
CCGAATCGCATCATGAACCCGTACAAGTACATCTAA
Gene >Hirsu2|4148
ATGCCGGCGACAGCCGCACCGACGCTCAGGGCGGCTGCCGCGGCTGCCGCGGCCTCCCGCACTCTCGCGACGTCG
GCCTCCCGGCCCTTCGCCCACTCCGTGGGGGGGCGGAGGATCCGGGCGCAGCTCACCGCCGACACGTACCCGGGG
CTGCGACGGGACGAGCGGTTCGCCAGGCTCACGGGCGAGCACGTCGCCTACTTCAGGCGTCTGCTGGGCGACGGC
GGGTCGGCCGTCGTGTCCGACGTCGACGGCGACGGCGACGCCCAGGCCGACCTGGACGCCTTCAACGAGGACTGG
ATGCACAAGTACCGCGGCCAGTGCCGGCTGGTGCTCAGGCCGGCCTCGACGGACCACGTCAGCCAGATCCTGCGT
TACTGCAACGAGAAGCTGCTGGCGGTGGTGCCGCAGGGCGGCAACACGGGCCTGGTGGGCGGCTCGGTGCCCGTC
TTCGACGAGATCGTCGTCAGCATGGCGCGCATGAACCGCATCCACTCCTTCGACGAGGCCAGCGGCTGCCTCGTC
CTCGACGCCGGCTGCATCCTCGAGGTGGCCGACCAGTACCTCGAGCAGAGGGGCCACATCTTCCCGCTCGACCTC
GGGGCCAAGGGCTCGTGCCAGGTCGGCGGCAACGTGGCGACCAACGCCGGCGGCCTCCGCCTCCTCCGCTACGGC
AGCCTGCACGGCAGCGTGCTCGGCATGGAGGCGGTGCTGCCGGACGGCACCGTCATGGACGACCTGGGCACGCTG
CGCAAGAACAACACGGGCTACGACCTCAAGCAGCTCTTCATCGGCGCCGAGGGCACGCTCGGCGTCATCACCCGG
CTGGCCGTCCACTGCCCGCAGCGGCCGCCGGCCGTCAACGTCGCCCTGCTCGGGCTCGACTCGTACGACAAGGCG
CTGCGCGCCTTCCGCGAGGCCAAGGGCCGCCTGTCCGAGATCCTGTCCGCCTTCGAGCTCATGGACGGCCGCAGC
CTGCAGATGGTGCAGGCGGTGCGGCGCGAGGCGCGCCCGCTCGAGGGCGAGCACCCCTTCTACTGCCTCGTCGAG
ACGAGCGGCTCCGACGGCGACCACGACGGCGACAAGCTCGACCGCTTCCTCGAGCGCGTCATGGCCGACGACGTC
GTCGCCGACGGCGTCGTCGCCCAGGACGCCACCCAGGCCAAGACGCTGTGGAGCTGGCGCGAGGGCGTGCCCGAG
TGCGTCGGCCACTGGGGCGGCGTGTACAAGTACGACGTCTCGATCCCGCTCCCCTGCATGTACTCGCTCGTCGAC
GACGTCCGGGCCCGCCTGGACGCGGCGGGCCTCGCCGGCGACTCGGACCAGCATCCGGTTGTCGGCGTCGTCGGC
TACGGCCACATGGGCGACTCCAACCTGCACCTCAACGTCGCCACGCGCCGCTACGACAAGCAGGTCGAGCAGGCG
CTGGAGCCGTACGTCTACGAATGGATCGAGCGCCACCGCGGCAGCATCAGCGCCGAGCACGGCCTGGGCCTCGCC
AAGCGCGACTACGTCGGCTACAGCAGGGGCACCACCATGGTCGCCCTGATGAAGCAGATCAAGCGTCTGTATGAT
CCGGTGAGTTCTGGCCTGATTCCCTTTCCTCGACCTTCCCCCCCCCCCCCCCTTTTTTTTTTCCATCCCACCTCC
TTCTCCCCCCCTCGCCCTCCTCGCGGGCAGGATCACCGTAAGGCTGACTGACAGGGGGAAAATCGGGGGCCCGCA
TCACGGCCCCCGACCCCGAGTCCGTCTTCCACAGAATCGCATCATGAACCCGTACAAGTACATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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