Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4138
Gene name
LocationContig_2136:2458..3518
Strand-
Gene length (bp)1060
Transcript length (bp)1017
Coding sequence length (bp)1017
Protein length (aa) 339

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 49 71 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4138
MRPGRGRRVGAVVPGTTVSAAPCFPAELVRRGRLPPLGRRGGGRPCPRAGHVGPVVVVPVIVVVVVVVVIAPAFS
SPGSARQRGRMRERTGRLGVVARQAPLVVVLAPDATEGAGVADRHVVAASAAGVEALEGAGLAKLPDPADDAAYG
VEGKRAPRALRQHGLGRQGEEGRRAARVGQVDVLARPFGAEGAAVVGVGVHALAEDAAVVVESAVGRVELAGEGI
VSLMGGEGGGAQDGGGRGCGGGAAAVIGGMAPVRSPRSVIGAAPAALTLGRRGDISGGVGGGGGGRGRGNGAGVG
QVPRRQDGRTKEAVVDALGVKGAGHARARREGHVETSV*
Coding >Hirsu2|4138
ATGCGCCCTGGCCGCGGCCGCCGCGTGGGGGCGGTCGTGCCTGGCACGACAGTCTCCGCTGCGCCGTGCTTTCCT
GCCGAGCTCGTCCGCCGGGGCCGTCTGCCTCCTCTTGGCCGCCGGGGCGGTGGGCGTCCATGTCCTCGAGCCGGC
CATGTAGGTCCCGTCGTCGTCGTCCCCGTCATTGTTGTCGTCGTCGTCGTCGTCGTCATCGCGCCCGCCTTCTCC
TCGCCCGGCTCCGCCCGCCAGCGCGGTCGCATGCGGGAACGGACAGGACGCCTGGGGGTAGTGGCCCGGCAGGCG
CCGCTCGTCGTCGTGCTCGCGCCCGACGCAACCGAGGGCGCCGGCGTCGCGGACCGGCACGTCGTAGCCGCGTCC
GCCGCCGGCGTAGAAGCCCTTGAAGGCGCCGGCCTTGCAAAACTCCCAGACCCTGCCGACGACGCCGCCTATGGT
GTTGAGGGCAAACGTGCTCCACGGGCGCTGCGGCAGCACGGGCTCGGCCGGCAGGGAGAAGAGGGGCGTCGGGCG
GCTCGAGTCGGTCAGGTCGACGTCCTGGCGCGGCCGTTTGGAGCCGAGGGCGCGGCGGTAGTTGGAGTCGGAGTA
CATGCTCTCGCCGAGGATGCTGCTGTCGTCGTCGAGTCCGCTGTTGGGCGTGTCGAGCTGGCCGGCGAGGGCATA
GTTTCGTTGATGGGGGGCGAGGGCGGGGGTGCGCAGGACGGAGGTGGCCGTGGCTGCGGCGGCGGCGCCGCCGCC
GTCATCGGCGGTATGGCGCCGGTCCGCTCGCCGCGCAGCGTCATCGGGGCCGCGCCAGCAGCGCTTACGCTTGGG
CGTCGTGGCGACATCAGCGGCGGCGTGGGCGGCGGCGGAGGCGGACGCGGCCGAGGAAACGGGGCGGGCGTTGGG
CAGGTACCCCGACGGCAGGACGGGCGGACGAAAGAGGCCGTGGTGGATGCCCTCGGCGTGAAAGGCGCCGGGCAT
GCGCGGGCCCGACGGGAAGGCCATGTGGAGACGTCGGTGTAG
Transcript >Hirsu2|4138
ATGCGCCCTGGCCGCGGCCGCCGCGTGGGGGCGGTCGTGCCTGGCACGACAGTCTCCGCTGCGCCGTGCTTTCCT
GCCGAGCTCGTCCGCCGGGGCCGTCTGCCTCCTCTTGGCCGCCGGGGCGGTGGGCGTCCATGTCCTCGAGCCGGC
CATGTAGGTCCCGTCGTCGTCGTCCCCGTCATTGTTGTCGTCGTCGTCGTCGTCGTCATCGCGCCCGCCTTCTCC
TCGCCCGGCTCCGCCCGCCAGCGCGGTCGCATGCGGGAACGGACAGGACGCCTGGGGGTAGTGGCCCGGCAGGCG
CCGCTCGTCGTCGTGCTCGCGCCCGACGCAACCGAGGGCGCCGGCGTCGCGGACCGGCACGTCGTAGCCGCGTCC
GCCGCCGGCGTAGAAGCCCTTGAAGGCGCCGGCCTTGCAAAACTCCCAGACCCTGCCGACGACGCCGCCTATGGT
GTTGAGGGCAAACGTGCTCCACGGGCGCTGCGGCAGCACGGGCTCGGCCGGCAGGGAGAAGAGGGGCGTCGGGCG
GCTCGAGTCGGTCAGGTCGACGTCCTGGCGCGGCCGTTTGGAGCCGAGGGCGCGGCGGTAGTTGGAGTCGGAGTA
CATGCTCTCGCCGAGGATGCTGCTGTCGTCGTCGAGTCCGCTGTTGGGCGTGTCGAGCTGGCCGGCGAGGGCATA
GTTTCGTTGATGGGGGGCGAGGGCGGGGGTGCGCAGGACGGAGGTGGCCGTGGCTGCGGCGGCGGCGCCGCCGCC
GTCATCGGCGGTATGGCGCCGGTCCGCTCGCCGCGCAGCGTCATCGGGGCCGCGCCAGCAGCGCTTACGCTTGGG
CGTCGTGGCGACATCAGCGGCGGCGTGGGCGGCGGCGGAGGCGGACGCGGCCGAGGAAACGGGGCGGGCGTTGGG
CAGGTACCCCGACGGCAGGACGGGCGGACGAAAGAGGCCGTGGTGGATGCCCTCGGCGTGAAAGGCGCCGGGCAT
GCGCGGGCCCGACGGGAAGGCCATGTGGAGACGTCGGTGTAG
Gene >Hirsu2|4138
ATGCGCCCTGGCCGCGGCCGCCGCGTGGGGGCGGTCGTGCCTGGCACGACAGTCTCCGCTGCGCCGTGCTGTCCG
TCTCCGACCGGGAACCGGGCTGCCTGATCATGACCCAGTTCCTGCCGAGCTCGTCCGCCGGGGCCGTCTGCCTCC
TCTTGGCCGCCGGGGCGGTGGGCGTCCATGTCCTCGAGCCGGCCATGTAGGTCCCGTCGTCGTCGTCCCCGTCAT
TGTTGTCGTCGTCGTCGTCGTCGTCATCGCGCCCGCCTTCTCCTCGCCCGGCTCCGCCCGCCAGCGCGGTCGCAT
GCGGGAACGGACAGGACGCCTGGGGGTAGTGGCCCGGCAGGCGCCGCTCGTCGTCGTGCTCGCGCCCGACGCAAC
CGAGGGCGCCGGCGTCGCGGACCGGCACGTCGTAGCCGCGTCCGCCGCCGGCGTAGAAGCCCTTGAAGGCGCCGG
CCTTGCAAAACTCCCAGACCCTGCCGACGACGCCGCCTATGGTGTTGAGGGCAAACGTGCTCCACGGGCGCTGCG
GCAGCACGGGCTCGGCCGGCAGGGAGAAGAGGGGCGTCGGGCGGCTCGAGTCGGTCAGGTCGACGTCCTGGCGCG
GCCGTTTGGAGCCGAGGGCGCGGCGGTAGTTGGAGTCGGAGTACATGCTCTCGCCGAGGATGCTGCTGTCGTCGT
CGAGTCCGCTGTTGGGCGTGTCGAGCTGGCCGGCGAGGGCATAGTTTCGTTGATGGGGGGCGAGGGCGGGGGTGC
GCAGGACGGAGGTGGCCGTGGCTGCGGCGGCGGCGCCGCCGCCGTCATCGGCGGTATGGCGCCGGTCCGCTCGCC
GCGCAGCGTCATCGGGGCCGCGCCAGCAGCGCTTACGCTTGGGCGTCGTGGCGACATCAGCGGCGGCGTGGGCGG
CGGCGGAGGCGGACGCGGCCGAGGAAACGGGGCGGGCGTTGGGCAGGTACCCCGACGGCAGGACGGGCGGACGAA
AGAGGCCGTGGTGGATGCCCTCGGCGTGAAAGGCGCCGGGCATGCGCGGGCCCGACGGGAAGGCCATGTGGAGAC
GTCGGTGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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