© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4130 |
| Gene name | |
| Location | Contig_2131:2600..3128 |
| Strand | - |
| Gene length (bp) | 528 |
| Transcript length (bp) | 528 |
| Coding sequence length (bp) | 528 |
| Protein length (aa) | 176 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01284 | MARVEL | Membrane-associating domain | 3.0E-21 | 4 | 148 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12207|NCE2_YEAST | Non-classical export protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NCE102 PE=1 SV=1 | 1 | 174 | 1.0E-10 |
| sp|Q5ANE3|NCE2_CANAL | Non-classical export protein 102 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NCE102 PE=1 SV=1 | 6 | 174 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 28 | 21 |
| 2 | 43 | 65 | 22 |
| 3 | 72 | 94 | 22 |
| 4 | 136 | 158 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4130 MHSWVNLVVRLICLMWTLIITALIGNVVDQNINGASSAMAALDWVLFVCAWSWLACFYSIAATYVDALANPFITI PIDFFAWLFTIIAGVVLAAKLTGVNCGNWEHRNFGRGWIAFGSHNTEKRCREIQASTVMMWFLWVCFCVGFFLTC LQAKGAIGGFGRSSRRSRPNMSQVA* |
| Coding | >Hirsu2|4130 ATGCATTCGTGGGTCAACCTCGTCGTCCGGCTCATCTGCCTGATGTGGACGCTCATCATCACGGCCCTGATCGGC AACGTCGTCGACCAGAACATCAACGGTGCCAGCAGCGCCATGGCCGCGCTCGACTGGGTCCTCTTCGTCTGCGCC TGGTCTTGGCTGGCCTGCTTCTACTCCATCGCCGCCACCTACGTCGACGCGCTGGCCAACCCCTTCATCACCATC CCCATCGACTTCTTCGCCTGGCTCTTCACCATCATCGCCGGCGTCGTCCTGGCCGCCAAGCTGACGGGCGTCAAC TGCGGCAACTGGGAGCACCGCAACTTCGGCCGCGGCTGGATCGCCTTCGGCTCCCACAACACCGAGAAGCGCTGT CGCGAGATCCAGGCCAGCACCGTCATGATGTGGTTCCTCTGGGTCTGCTTCTGCGTCGGCTTCTTCCTCACCTGC CTGCAGGCCAAGGGCGCCATCGGCGGCTTCGGTCGCTCTTCGCGCCGCTCCCGCCCCAACATGTCGCAGGTCGCC TAA |
| Transcript | >Hirsu2|4130 ATGCATTCGTGGGTCAACCTCGTCGTCCGGCTCATCTGCCTGATGTGGACGCTCATCATCACGGCCCTGATCGGC AACGTCGTCGACCAGAACATCAACGGTGCCAGCAGCGCCATGGCCGCGCTCGACTGGGTCCTCTTCGTCTGCGCC TGGTCTTGGCTGGCCTGCTTCTACTCCATCGCCGCCACCTACGTCGACGCGCTGGCCAACCCCTTCATCACCATC CCCATCGACTTCTTCGCCTGGCTCTTCACCATCATCGCCGGCGTCGTCCTGGCCGCCAAGCTGACGGGCGTCAAC TGCGGCAACTGGGAGCACCGCAACTTCGGCCGCGGCTGGATCGCCTTCGGCTCCCACAACACCGAGAAGCGCTGT CGCGAGATCCAGGCCAGCACCGTCATGATGTGGTTCCTCTGGGTCTGCTTCTGCGTCGGCTTCTTCCTCACCTGC CTGCAGGCCAAGGGCGCCATCGGCGGCTTCGGTCGCTCTTCGCGCCGCTCCCGCCCCAACATGTCGCAGGTCGCC TAA |
| Gene | >Hirsu2|4130 ATGCATTCGTGGGTCAACCTCGTCGTCCGGCTCATCTGCCTGATGTGGACGCTCATCATCACGGCCCTGATCGGC AACGTCGTCGACCAGAACATCAACGGTGCCAGCAGCGCCATGGCCGCGCTCGACTGGGTCCTCTTCGTCTGCGCC TGGTCTTGGCTGGCCTGCTTCTACTCCATCGCCGCCACCTACGTCGACGCGCTGGCCAACCCCTTCATCACCATC CCCATCGACTTCTTCGCCTGGCTCTTCACCATCATCGCCGGCGTCGTCCTGGCCGCCAAGCTGACGGGCGTCAAC TGCGGCAACTGGGAGCACCGCAACTTCGGCCGCGGCTGGATCGCCTTCGGCTCCCACAACACCGAGAAGCGCTGT CGCGAGATCCAGGCCAGCACCGTCATGATGTGGTTCCTCTGGGTCTGCTTCTGCGTCGGCTTCTTCCTCACCTGC CTGCAGGCCAAGGGCGCCATCGGCGGCTTCGGTCGCTCTTCGCGCCGCTCCCGCCCCAACATGTCGCAGGTCGCC TAA |