Protein ID | Hirsu2|4128 |
Gene name | |
Location | Contig_2130:2643..3610 |
Strand | + |
Gene length (bp) | 967 |
Transcript length (bp) | 906 |
Coding sequence length (bp) | 906 |
Protein length (aa) | 302 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1889 | 0.0869 | 0.8186 | 0.1629 | 0.0451 | 0.0142 | 0.4395 | 0.2817 | 0.3173 | 0.0015 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 28 | 0.999712 |
Orthofinder run ID | 4 |
Orthogroup | 6126 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|4128 MMLAPLRLAFVALSFILCLHLWGTVCDAAPPYVPGGAPGLPRRFPAGIRQPPPRPPKPKGLPVPSSPKGPPRPPK PGKKEVIYTTPVISQTGATSKSGQKGQGSEKTDYAEIDPIKTKQHNKQGDHIGAIERDGKLYGGDGKLLPTTRNP DNPKSRWWQKTGNYWYEHRISPGGKEQRRKEPFTPSEAPKSRLSGGEGNKDTVRPASPEIDPIKTKQHNKQGDPI GAIERDGKLYGGDGKPLPTTRNPNNPKSRWWQKTGNYWYRYRVGKGGKEQRRKEPFTLSEAPKSRLSGGEGNKDT R* |
Coding | >Hirsu2|4128 ATGATGCTCGCGCCACTGCGCCTGGCCTTCGTGGCGCTGTCATTCATCCTTTGCCTTCACCTATGGGGTACCGTT TGTGACGCCGCTCCCCCATATGTGCCAGGAGGGGCTCCTGGGCTACCCCGAAGATTTCCGGCTGGAATAAGACAG CCTCCTCCGCGACCCCCTAAGCCTAAAGGGCTCCCGGTTCCCTCAAGTCCTAAAGGACCTCCGCGACCCCCTAAG CCTGGAAAGAAAGAGGTGATCTATACGACGCCTGTGATCAGCCAGACAGGCGCAACCTCCAAGTCGGGTCAAAAA GGTCAAGGCAGCGAGAAAACAGACTACGCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGAC CATATTGGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCTTCTGCCTACTACAAGGAACCCC GACAACCCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTATGAACACAGAATCAGCCCAGGGGGTAAA GAGCAGCGCAGGAAAGAGCCATTCACGCCGAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAA GACACGGTACGGCCGGCGAGTCCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGACCCTATT GGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCCTCTGCCTACTACAAGGAACCCCAATAAC CCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTACAGATACAGAGTCGGCAAAGGGGGTAAAGAGCAG CGCAGGAAAGAGCCATTCACGCTAAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAAGACACG AGATAA |
Transcript | >Hirsu2|4128 ATGATGCTCGCGCCACTGCGCCTGGCCTTCGTGGCGCTGTCATTCATCCTTTGCCTTCACCTATGGGGTACCGTT TGTGACGCCGCTCCCCCATATGTGCCAGGAGGGGCTCCTGGGCTACCCCGAAGATTTCCGGCTGGAATAAGACAG CCTCCTCCGCGACCCCCTAAGCCTAAAGGGCTCCCGGTTCCCTCAAGTCCTAAAGGACCTCCGCGACCCCCTAAG CCTGGAAAGAAAGAGGTGATCTATACGACGCCTGTGATCAGCCAGACAGGCGCAACCTCCAAGTCGGGTCAAAAA GGTCAAGGCAGCGAGAAAACAGACTACGCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGAC CATATTGGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCTTCTGCCTACTACAAGGAACCCC GACAACCCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTATGAACACAGAATCAGCCCAGGGGGTAAA GAGCAGCGCAGGAAAGAGCCATTCACGCCGAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAA GACACGGTACGGCCGGCGAGTCCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGACCCTATT GGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCCTCTGCCTACTACAAGGAACCCCAATAAC CCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTACAGATACAGAGTCGGCAAAGGGGGTAAAGAGCAG CGCAGGAAAGAGCCATTCACGCTAAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAAGACACG AGATAA |
Gene | >Hirsu2|4128 ATGATGCTCGCGCCACTGCGCCTGGCCTTCGTGGCGCTGTCATTCATCCTTTGCCTTCACCTATGGGGTACCGTT TGTGACGCCGCTCCCCCATATGTGCCAGGAGGGGCTCCTGGGCTACCCCGAAGATTTCCGGCTGGAATAAGACAG CCTCCTCCGCGACCCCCTAAGCCTAAAGGGCTCCCGGTTCCCTCAAGTCCTAAAGGACCTCCGCGACCCCCTAAG CCTGGAAAGAAAGAGGTGATCTATACGACGCCTGTGATCAGCCAGACAGGCGCAACCTCCAAGTCGGGTCAAAAA GGTCAAGGCAGCGAGAAAACAGACTACGCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGAC CATATTGGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCTTCTGCCTACTACAAGGAACCCC GACAACCCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTATGAACACAGAATCAGCCCAGGGGGTAAA GAGCAGCGCAGGAAAGAGCCATTCACGCCGAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAA GACACGGTACGGCCGGCGAGTCCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGACCCTATT GGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCCTCTGCCTACTACAAGGAACCCCAATAAC CCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTACAGATACAGAGTCGGCAAAGGGGGTAAAGAGCAG CGCAGGAAAGAGCCATTCACGCTAAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAAGACACG GTACGGCCGGCGAGTCCGGGGGGATCGGGGTCAAGTGGTCAACGGTTTCCGCCTATGAAAGAGATAA |