Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4128
Gene name
LocationContig_2130:2643..3610
Strand+
Gene length (bp)967
Transcript length (bp)906
Coding sequence length (bp)906
Protein length (aa) 302

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1889 0.0869 0.8186 0.1629 0.0451 0.0142 0.4395 0.2817 0.3173 0.0015

SignalP

SignalP signal predicted Location Score
Yes 1 - 28 0.999712

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6126
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|6079
Ophiocordyceps camponoti-rufipedis Ophun1|4342
Ophiocordyceps kimflemingae Ophio5|5632
Ophiocordyceps subramaniannii Hirsu2|4128 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4128
MMLAPLRLAFVALSFILCLHLWGTVCDAAPPYVPGGAPGLPRRFPAGIRQPPPRPPKPKGLPVPSSPKGPPRPPK
PGKKEVIYTTPVISQTGATSKSGQKGQGSEKTDYAEIDPIKTKQHNKQGDHIGAIERDGKLYGGDGKLLPTTRNP
DNPKSRWWQKTGNYWYEHRISPGGKEQRRKEPFTPSEAPKSRLSGGEGNKDTVRPASPEIDPIKTKQHNKQGDPI
GAIERDGKLYGGDGKPLPTTRNPNNPKSRWWQKTGNYWYRYRVGKGGKEQRRKEPFTLSEAPKSRLSGGEGNKDT
R*
Coding >Hirsu2|4128
ATGATGCTCGCGCCACTGCGCCTGGCCTTCGTGGCGCTGTCATTCATCCTTTGCCTTCACCTATGGGGTACCGTT
TGTGACGCCGCTCCCCCATATGTGCCAGGAGGGGCTCCTGGGCTACCCCGAAGATTTCCGGCTGGAATAAGACAG
CCTCCTCCGCGACCCCCTAAGCCTAAAGGGCTCCCGGTTCCCTCAAGTCCTAAAGGACCTCCGCGACCCCCTAAG
CCTGGAAAGAAAGAGGTGATCTATACGACGCCTGTGATCAGCCAGACAGGCGCAACCTCCAAGTCGGGTCAAAAA
GGTCAAGGCAGCGAGAAAACAGACTACGCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGAC
CATATTGGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCTTCTGCCTACTACAAGGAACCCC
GACAACCCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTATGAACACAGAATCAGCCCAGGGGGTAAA
GAGCAGCGCAGGAAAGAGCCATTCACGCCGAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAA
GACACGGTACGGCCGGCGAGTCCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGACCCTATT
GGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCCTCTGCCTACTACAAGGAACCCCAATAAC
CCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTACAGATACAGAGTCGGCAAAGGGGGTAAAGAGCAG
CGCAGGAAAGAGCCATTCACGCTAAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAAGACACG
AGATAA
Transcript >Hirsu2|4128
ATGATGCTCGCGCCACTGCGCCTGGCCTTCGTGGCGCTGTCATTCATCCTTTGCCTTCACCTATGGGGTACCGTT
TGTGACGCCGCTCCCCCATATGTGCCAGGAGGGGCTCCTGGGCTACCCCGAAGATTTCCGGCTGGAATAAGACAG
CCTCCTCCGCGACCCCCTAAGCCTAAAGGGCTCCCGGTTCCCTCAAGTCCTAAAGGACCTCCGCGACCCCCTAAG
CCTGGAAAGAAAGAGGTGATCTATACGACGCCTGTGATCAGCCAGACAGGCGCAACCTCCAAGTCGGGTCAAAAA
GGTCAAGGCAGCGAGAAAACAGACTACGCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGAC
CATATTGGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCTTCTGCCTACTACAAGGAACCCC
GACAACCCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTATGAACACAGAATCAGCCCAGGGGGTAAA
GAGCAGCGCAGGAAAGAGCCATTCACGCCGAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAA
GACACGGTACGGCCGGCGAGTCCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGACCCTATT
GGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCCTCTGCCTACTACAAGGAACCCCAATAAC
CCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTACAGATACAGAGTCGGCAAAGGGGGTAAAGAGCAG
CGCAGGAAAGAGCCATTCACGCTAAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAAGACACG
AGATAA
Gene >Hirsu2|4128
ATGATGCTCGCGCCACTGCGCCTGGCCTTCGTGGCGCTGTCATTCATCCTTTGCCTTCACCTATGGGGTACCGTT
TGTGACGCCGCTCCCCCATATGTGCCAGGAGGGGCTCCTGGGCTACCCCGAAGATTTCCGGCTGGAATAAGACAG
CCTCCTCCGCGACCCCCTAAGCCTAAAGGGCTCCCGGTTCCCTCAAGTCCTAAAGGACCTCCGCGACCCCCTAAG
CCTGGAAAGAAAGAGGTGATCTATACGACGCCTGTGATCAGCCAGACAGGCGCAACCTCCAAGTCGGGTCAAAAA
GGTCAAGGCAGCGAGAAAACAGACTACGCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGAC
CATATTGGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCTTCTGCCTACTACAAGGAACCCC
GACAACCCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTATGAACACAGAATCAGCCCAGGGGGTAAA
GAGCAGCGCAGGAAAGAGCCATTCACGCCGAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAA
GACACGGTACGGCCGGCGAGTCCGGAAATCGATCCTATCAAGACCAAGCAGCACAACAAACAGGGCGACCCTATT
GGAGCAATCGAGAGGGATGGCAAACTTTACGGTGGCGATGGCAAGCCTCTGCCTACTACAAGGAACCCCAATAAC
CCGAAGAGTCGATGGTGGCAGAAAACTGGCAACTACTGGTACAGATACAGAGTCGGCAAAGGGGGTAAAGAGCAG
CGCAGGAAAGAGCCATTCACGCTAAGCGAGGCGCCAAAGTCTCGTCTCTCCGGCGGTGAGGGCAACAAAGACACG
GTACGGCCGGCGAGTCCGGGGGGATCGGGGTCAAGTGGTCAACGGTTTCCGCCTATGAAAGAGATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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