© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4126 |
| Gene name | |
| Location | Contig_213:23639..24671 |
| Strand | + |
| Gene length (bp) | 1032 |
| Transcript length (bp) | 975 |
| Coding sequence length (bp) | 975 |
| Protein length (aa) | 325 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13641 | Glyco_tranf_2_3 | Glycosyltransferase like family 2 | 3.4E-23 | 66 | 303 |
| PF00535 | Glycos_transf_2 | Glycosyl transferase family 2 | 1.0E-09 | 94 | 232 |
| PF13506 | Glyco_transf_21 | Glycosyl transferase family 21 | 3.7E-06 | 133 | 304 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016757 | glycosyltransferase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4126 MSLLSAMQWLYFPDAFWFLVVQLYPSRFTATLAIFFRLLRKGWTWYLSAVHAPVPLSRNPSYLGARDVSIVAATI DTPDAFSACLRTWAGNAPKEIIIVTVPHDAARVRALVSAAQVPSTVPVTVLTHPRATKRGQMSRGIRQSTGRIVA LADDDTYWPPTALAHLLAPFEDPAVGGVGGRHKAAPPEHKTKWNCWEAAAARRLWVHNISKTANNAILDGCFVLP GRTVLYRGHIVRDDAFLHAFTHDYWLGKFLADSGDDTFITRWCQSHGWAIKFQSNLEADVLTSCKDSSAFIKQCV RWHRSSLRTSLRTIFHIRQLLRYS* |
| Coding | >Hirsu2|4126 ATGTCGCTACTTTCTGCCATGCAGTGGTTGTATTTCCCGGATGCATTCTGGTTCCTCGTGGTTCAATTATACCCC TCCCGCTTCACAGCCACTCTCGCCATATTCTTCCGGCTCCTGAGAAAAGGCTGGACATGGTATCTCAGTGCGGTT CATGCGCCGGTACCACTATCCCGCAACCCGAGTTACCTCGGCGCCCGCGATGTCAGCATCGTCGCCGCCACCATC GACACGCCCGACGCCTTCTCAGCCTGCCTGCGCACCTGGGCTGGCAATGCCCCCAAGGAGATCATCATCGTGACG GTCCCCCATGACGCTGCCCGCGTCCGCGCCCTCGTCTCGGCCGCTCAGGTGCCGTCGACCGTGCCGGTGACGGTT CTCACGCACCCGCGGGCCACCAAGCGTGGCCAGATGAGCCGCGGGATCCGCCAAAGCACAGGTCGTATCGTCGCC CTTGCTGACGACGACACTTACTGGCCGCCCACGGCACTGGCTCATCTGCTGGCCCCCTTTGAGGACCCGGCCGTC GGGGGCGTAGGCGGGCGCCACAAGGCCGCACCTCCCGAGCATAAGACGAAGTGGAATTGCTGGGAAGCAGCTGCG GCACGGCGTCTCTGGGTGCACAACATATCCAAGACGGCCAATAATGCCATCCTCGACGGCTGCTTCGTCCTCCCG GGCCGGACGGTTCTATATCGTGGGCACATCGTACGCGACGACGCCTTCCTCCATGCCTTCACCCACGATTACTGG CTGGGAAAGTTCCTGGCCGACTCTGGTGATGATACATTTATAACACGGTGGTGCCAGTCCCACGGTTGGGCAATC AAGTTCCAGTCCAATCTCGAGGCTGACGTTTTGACCAGCTGCAAGGACTCCTCGGCCTTTATCAAGCAATGCGTA CGGTGGCATCGCAGCTCGCTGAGGACTTCTCTGCGAACTATTTTCCATATCCGGCAGCTTTTAAGGTATTCATGA |
| Transcript | >Hirsu2|4126 ATGTCGCTACTTTCTGCCATGCAGTGGTTGTATTTCCCGGATGCATTCTGGTTCCTCGTGGTTCAATTATACCCC TCCCGCTTCACAGCCACTCTCGCCATATTCTTCCGGCTCCTGAGAAAAGGCTGGACATGGTATCTCAGTGCGGTT CATGCGCCGGTACCACTATCCCGCAACCCGAGTTACCTCGGCGCCCGCGATGTCAGCATCGTCGCCGCCACCATC GACACGCCCGACGCCTTCTCAGCCTGCCTGCGCACCTGGGCTGGCAATGCCCCCAAGGAGATCATCATCGTGACG GTCCCCCATGACGCTGCCCGCGTCCGCGCCCTCGTCTCGGCCGCTCAGGTGCCGTCGACCGTGCCGGTGACGGTT CTCACGCACCCGCGGGCCACCAAGCGTGGCCAGATGAGCCGCGGGATCCGCCAAAGCACAGGTCGTATCGTCGCC CTTGCTGACGACGACACTTACTGGCCGCCCACGGCACTGGCTCATCTGCTGGCCCCCTTTGAGGACCCGGCCGTC GGGGGCGTAGGCGGGCGCCACAAGGCCGCACCTCCCGAGCATAAGACGAAGTGGAATTGCTGGGAAGCAGCTGCG GCACGGCGTCTCTGGGTGCACAACATATCCAAGACGGCCAATAATGCCATCCTCGACGGCTGCTTCGTCCTCCCG GGCCGGACGGTTCTATATCGTGGGCACATCGTACGCGACGACGCCTTCCTCCATGCCTTCACCCACGATTACTGG CTGGGAAAGTTCCTGGCCGACTCTGGTGATGATACATTTATAACACGGTGGTGCCAGTCCCACGGTTGGGCAATC AAGTTCCAGTCCAATCTCGAGGCTGACGTTTTGACCAGCTGCAAGGACTCCTCGGCCTTTATCAAGCAATGCGTA CGGTGGCATCGCAGCTCGCTGAGGACTTCTCTGCGAACTATTTTCCATATCCGGCAGCTTTTAAGGTATTCATGA |
| Gene | >Hirsu2|4126 ATGTCGCTACTTTCTGCCATGCAGTGGTTGTATTTCCCGGATGCATTCTGGTTCCTCGTGGTTCAATTATACCCC TCCCGCTTCACAGCCACTCTCGCCATGTAGAACGCATCTTCTAGCAAAGGCCGTGCTAGCAGAGCAACTAACTGG CGCCGCAGATTCTTCCGGCTCCTGAGAAAAGGCTGGACATGGTATCTCAGTGCGGTTCATGCGCCGGTACCACTA TCCCGCAACCCGAGTTACCTCGGCGCCCGCGATGTCAGCATCGTCGCCGCCACCATCGACACGCCCGACGCCTTC TCAGCCTGCCTGCGCACCTGGGCTGGCAATGCCCCCAAGGAGATCATCATCGTGACGGTCCCCCATGACGCTGCC CGCGTCCGCGCCCTCGTCTCGGCCGCTCAGGTGCCGTCGACCGTGCCGGTGACGGTTCTCACGCACCCGCGGGCC ACCAAGCGTGGCCAGATGAGCCGCGGGATCCGCCAAAGCACAGGTCGTATCGTCGCCCTTGCTGACGACGACACT TACTGGCCGCCCACGGCACTGGCTCATCTGCTGGCCCCCTTTGAGGACCCGGCCGTCGGGGGCGTAGGCGGGCGC CACAAGGCCGCACCTCCCGAGCATAAGACGAAGTGGAATTGCTGGGAAGCAGCTGCGGCACGGCGTCTCTGGGTG CACAACATATCCAAGACGGCCAATAATGCCATCCTCGACGGCTGCTTCGTCCTCCCGGGCCGGACGGTTCTATAT CGTGGGCACATCGTACGCGACGACGCCTTCCTCCATGCCTTCACCCACGATTACTGGCTGGGAAAGTTCCTGGCC GACTCTGGTGATGATACATTTATAACACGGTGGTGCCAGTCCCACGGTTGGGCAATCAAGTTCCAGTCCAATCTC GAGGCTGACGTTTTGACCAGCTGCAAGGACTCCTCGGCCTTTATCAAGCAATGCGTACGGTGGCATCGCAGCTCG CTGAGGACTTCTCTGCGAACTATTTTCCATATCCGGCAGCTTTTAAGGTATTCATGA |