Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4092
Gene name
LocationContig_2118:71..817
Strand-
Gene length (bp)746
Transcript length (bp)636
Coding sequence length (bp)636
Protein length (aa) 212

Overview

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q06466|TDA6_YEAST Putative vacuolar protein sorting-associated protein TDA6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TDA6 PE=2 SV=1 127 161 2.0E-06

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum|Golgi apparatus Signal peptide|Transmembrane domain 0.1889 0.1587 0.2652 0.2346 0.2834 0.0108 0.7122 0.3921 0.873 0.0123

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup797
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1863
Ophiocordyceps australis map64 (Brazil) OphauB2|7338
Ophiocordyceps camponoti-floridani Ophcf2|02015
Ophiocordyceps camponoti-rufipedis Ophun1|4309
Ophiocordyceps kimflemingae Ophio5|3321
Ophiocordyceps subramaniannii Hirsu2|3392
Ophiocordyceps subramaniannii Hirsu2|4092 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4092
MWRWLRRCAVVLAIFFALCFLASWLPTALSPTKASPEKQARDRLWVDSSPYFVDRQLCRWMSLCGLHHLKSDPAA
LPGPDAGPPPDEWRELRRRSPGPGPGPDPDATQRRRADKRTNTRERRRIVKDIPDYVTKYAPLVHLYSGEQFWPS
DIAEHVRHMNVTLDHELLDRPLPLTLDSLAELNGHRGTVALHSLDDRRGRLGPRPRAHHLV*
Coding >Hirsu2|4092
ATGTGGCGCTGGCTGCGGCGCTGTGCCGTCGTCCTGGCCATCTTCTTCGCCCTGTGCTTCCTCGCCAGCTGGCTG
CCCACCGCCCTCAGTCCCACCAAGGCCAGTCCGGAGAAGCAGGCCCGAGACCGGCTCTGGGTCGACAGCAGCCCC
TACTTCGTCGACCGCCAATTGTGCCGATGGATGAGCCTCTGCGGCCTCCATCACCTCAAGAGCGATCCCGCCGCC
CTCCCCGGCCCTGACGCCGGGCCGCCCCCCGACGAATGGCGCGAGCTGCGCAGGAGGTCCCCCGGTCCCGGCCCC
GGCCCCGACCCCGACGCCACCCAACGCCGCCGCGCCGACAAGAGGACCAACACGCGCGAGAGGCGGAGGATAGTC
AAGGACATCCCCGACTACGTCACCAAGTACGCGCCCCTCGTCCACCTCTACTCGGGCGAGCAGTTCTGGCCGTCG
GACATCGCCGAGCACGTCCGCCACATGAACGTCACCCTCGACCACGAGCTCCTCGACCGCCCGCTGCCCCTGACG
CTCGACAGCCTGGCCGAGCTCAACGGCCACCGCGGCACCGTCGCCCTGCACAGCCTCGACGACCGGCGAGGACGT
CTCGGCCCCCGGCCGCGAGCGCACCACCTGGTTTGA
Transcript >Hirsu2|4092
ATGTGGCGCTGGCTGCGGCGCTGTGCCGTCGTCCTGGCCATCTTCTTCGCCCTGTGCTTCCTCGCCAGCTGGCTG
CCCACCGCCCTCAGTCCCACCAAGGCCAGTCCGGAGAAGCAGGCCCGAGACCGGCTCTGGGTCGACAGCAGCCCC
TACTTCGTCGACCGCCAATTGTGCCGATGGATGAGCCTCTGCGGCCTCCATCACCTCAAGAGCGATCCCGCCGCC
CTCCCCGGCCCTGACGCCGGGCCGCCCCCCGACGAATGGCGCGAGCTGCGCAGGAGGTCCCCCGGTCCCGGCCCC
GGCCCCGACCCCGACGCCACCCAACGCCGCCGCGCCGACAAGAGGACCAACACGCGCGAGAGGCGGAGGATAGTC
AAGGACATCCCCGACTACGTCACCAAGTACGCGCCCCTCGTCCACCTCTACTCGGGCGAGCAGTTCTGGCCGTCG
GACATCGCCGAGCACGTCCGCCACATGAACGTCACCCTCGACCACGAGCTCCTCGACCGCCCGCTGCCCCTGACG
CTCGACAGCCTGGCCGAGCTCAACGGCCACCGCGGCACCGTCGCCCTGCACAGCCTCGACGACCGGCGAGGACGT
CTCGGCCCCCGGCCGCGAGCGCACCACCTGGTTTGA
Gene >Hirsu2|4092
ATGTGGCGCTGGCTGCGGCGCTGTGCCGTCGTCCTGGCCATCTTCTTCGCCCTGTGCTTCCTCGCCAGCTGGCTG
CCCACCGCCCTCAGTCCCACCAAGGCCAGTCCGGAGAAGCAGGCCCGAGACCGGCTCTGGGTCGACAGCAGCCCC
TACTTCGTCGACCGCCAATTGTGCCGATGGATGAGCCTCTGCGGCCTCCATCACCTCAAGAGCGATCCCGCCGCC
CTCCCCGGCCCTGACGCCGGGCCGCCCCCCGACGAATGGCGCGAGCTGCGCAGGAGGTCCCCCGGTCCCGGCCCC
GGCCCCGACCCCGACGCCACCCAACGCCGCCGCGCCGACAAGAGGACCAACACGCGCGAGAGGCGGAGGATAGTC
AAGGACATCCCCGACTACGTCACCAAGTACGCGCCCCTCGTCCACCTCTACTCGGGCGAGCAGTTCTGGCCGTCG
GACATCGCCGAGCACGTCCGCCACATGAACGTCACCCTCGACCACGAGCTCCTCGACCGCCCGCTGCCCCTGACG
CTCGACAGCCTGGCCGAGCTCAACGGCCACCGCGGCACCGTCGCCCTGCACAGCCTCGACGACGTCGAGTCCCGC
CCCGCCTGGCTGCACAGCCGCCCCAACCTGCCCGAGCCCTTCCCGGACGGCGACGGCGACGGCGACGGCGACGAC
CACCAGGACCCCCTGGTCGGCAGCGGCGAGGACGTCTCGGCCCCCGGCCGCGAGCGCACCACCTGGTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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