© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4092 |
| Gene name | |
| Location | Contig_2118:71..817 |
| Strand | - |
| Gene length (bp) | 746 |
| Transcript length (bp) | 636 |
| Coding sequence length (bp) | 636 |
| Protein length (aa) | 212 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q06466|TDA6_YEAST | Putative vacuolar protein sorting-associated protein TDA6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TDA6 PE=2 SV=1 | 127 | 161 | 2.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum|Golgi apparatus | Signal peptide|Transmembrane domain | 0.1889 | 0.1587 | 0.2652 | 0.2346 | 0.2834 | 0.0108 | 0.7122 | 0.3921 | 0.873 | 0.0123 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 797 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4092 MWRWLRRCAVVLAIFFALCFLASWLPTALSPTKASPEKQARDRLWVDSSPYFVDRQLCRWMSLCGLHHLKSDPAA LPGPDAGPPPDEWRELRRRSPGPGPGPDPDATQRRRADKRTNTRERRRIVKDIPDYVTKYAPLVHLYSGEQFWPS DIAEHVRHMNVTLDHELLDRPLPLTLDSLAELNGHRGTVALHSLDDRRGRLGPRPRAHHLV* |
| Coding | >Hirsu2|4092 ATGTGGCGCTGGCTGCGGCGCTGTGCCGTCGTCCTGGCCATCTTCTTCGCCCTGTGCTTCCTCGCCAGCTGGCTG CCCACCGCCCTCAGTCCCACCAAGGCCAGTCCGGAGAAGCAGGCCCGAGACCGGCTCTGGGTCGACAGCAGCCCC TACTTCGTCGACCGCCAATTGTGCCGATGGATGAGCCTCTGCGGCCTCCATCACCTCAAGAGCGATCCCGCCGCC CTCCCCGGCCCTGACGCCGGGCCGCCCCCCGACGAATGGCGCGAGCTGCGCAGGAGGTCCCCCGGTCCCGGCCCC GGCCCCGACCCCGACGCCACCCAACGCCGCCGCGCCGACAAGAGGACCAACACGCGCGAGAGGCGGAGGATAGTC AAGGACATCCCCGACTACGTCACCAAGTACGCGCCCCTCGTCCACCTCTACTCGGGCGAGCAGTTCTGGCCGTCG GACATCGCCGAGCACGTCCGCCACATGAACGTCACCCTCGACCACGAGCTCCTCGACCGCCCGCTGCCCCTGACG CTCGACAGCCTGGCCGAGCTCAACGGCCACCGCGGCACCGTCGCCCTGCACAGCCTCGACGACCGGCGAGGACGT CTCGGCCCCCGGCCGCGAGCGCACCACCTGGTTTGA |
| Transcript | >Hirsu2|4092 ATGTGGCGCTGGCTGCGGCGCTGTGCCGTCGTCCTGGCCATCTTCTTCGCCCTGTGCTTCCTCGCCAGCTGGCTG CCCACCGCCCTCAGTCCCACCAAGGCCAGTCCGGAGAAGCAGGCCCGAGACCGGCTCTGGGTCGACAGCAGCCCC TACTTCGTCGACCGCCAATTGTGCCGATGGATGAGCCTCTGCGGCCTCCATCACCTCAAGAGCGATCCCGCCGCC CTCCCCGGCCCTGACGCCGGGCCGCCCCCCGACGAATGGCGCGAGCTGCGCAGGAGGTCCCCCGGTCCCGGCCCC GGCCCCGACCCCGACGCCACCCAACGCCGCCGCGCCGACAAGAGGACCAACACGCGCGAGAGGCGGAGGATAGTC AAGGACATCCCCGACTACGTCACCAAGTACGCGCCCCTCGTCCACCTCTACTCGGGCGAGCAGTTCTGGCCGTCG GACATCGCCGAGCACGTCCGCCACATGAACGTCACCCTCGACCACGAGCTCCTCGACCGCCCGCTGCCCCTGACG CTCGACAGCCTGGCCGAGCTCAACGGCCACCGCGGCACCGTCGCCCTGCACAGCCTCGACGACCGGCGAGGACGT CTCGGCCCCCGGCCGCGAGCGCACCACCTGGTTTGA |
| Gene | >Hirsu2|4092 ATGTGGCGCTGGCTGCGGCGCTGTGCCGTCGTCCTGGCCATCTTCTTCGCCCTGTGCTTCCTCGCCAGCTGGCTG CCCACCGCCCTCAGTCCCACCAAGGCCAGTCCGGAGAAGCAGGCCCGAGACCGGCTCTGGGTCGACAGCAGCCCC TACTTCGTCGACCGCCAATTGTGCCGATGGATGAGCCTCTGCGGCCTCCATCACCTCAAGAGCGATCCCGCCGCC CTCCCCGGCCCTGACGCCGGGCCGCCCCCCGACGAATGGCGCGAGCTGCGCAGGAGGTCCCCCGGTCCCGGCCCC GGCCCCGACCCCGACGCCACCCAACGCCGCCGCGCCGACAAGAGGACCAACACGCGCGAGAGGCGGAGGATAGTC AAGGACATCCCCGACTACGTCACCAAGTACGCGCCCCTCGTCCACCTCTACTCGGGCGAGCAGTTCTGGCCGTCG GACATCGCCGAGCACGTCCGCCACATGAACGTCACCCTCGACCACGAGCTCCTCGACCGCCCGCTGCCCCTGACG CTCGACAGCCTGGCCGAGCTCAACGGCCACCGCGGCACCGTCGCCCTGCACAGCCTCGACGACGTCGAGTCCCGC CCCGCCTGGCTGCACAGCCGCCCCAACCTGCCCGAGCCCTTCCCGGACGGCGACGGCGACGGCGACGGCGACGAC CACCAGGACCCCCTGGTCGGCAGCGGCGAGGACGTCTCGGCCCCCGGCCGCGAGCGCACCACCTGGTTTGA |