Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|4092
Gene name
Location	Contig_2118:71..817
Strand	-
Gene length (bp)	746
Transcript length (bp)	636
Coding sequence length (bp)	636
Protein length (aa)	212

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q06466\|TDA6_YEAST	Putative vacuolar protein sorting-associated protein TDA6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TDA6 PE=2 SV=1	127	161	2.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 35	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|4092 MWRWLRRCAVVLAIFFALCFLASWLPTALSPTKASPEKQARDRLWVDSSPYFVDRQLCRWMSLCGLHHLKSDPAA LPGPDAGPPPDEWRELRRRSPGPGPGPDPDATQRRRADKRTNTRERRRIVKDIPDYVTKYAPLVHLYSGEQFWPS DIAEHVRHMNVTLDHELLDRPLPLTLDSLAELNGHRGTVALHSLDDRRGRLGPRPRAHHLV*
Coding	>Hirsu2\|4092 ATGTGGCGCTGGCTGCGGCGCTGTGCCGTCGTCCTGGCCATCTTCTTCGCCCTGTGCTTCCTCGCCAGCTGGCTG CCCACCGCCCTCAGTCCCACCAAGGCCAGTCCGGAGAAGCAGGCCCGAGACCGGCTCTGGGTCGACAGCAGCCCC TACTTCGTCGACCGCCAATTGTGCCGATGGATGAGCCTCTGCGGCCTCCATCACCTCAAGAGCGATCCCGCCGCC CTCCCCGGCCCTGACGCCGGGCCGCCCCCCGACGAATGGCGCGAGCTGCGCAGGAGGTCCCCCGGTCCCGGCCCC GGCCCCGACCCCGACGCCACCCAACGCCGCCGCGCCGACAAGAGGACCAACACGCGCGAGAGGCGGAGGATAGTC AAGGACATCCCCGACTACGTCACCAAGTACGCGCCCCTCGTCCACCTCTACTCGGGCGAGCAGTTCTGGCCGTCG GACATCGCCGAGCACGTCCGCCACATGAACGTCACCCTCGACCACGAGCTCCTCGACCGCCCGCTGCCCCTGACG CTCGACAGCCTGGCCGAGCTCAACGGCCACCGCGGCACCGTCGCCCTGCACAGCCTCGACGACCGGCGAGGACGT CTCGGCCCCCGGCCGCGAGCGCACCACCTGGTTTGA
Transcript	>Hirsu2\|4092 ATGTGGCGCTGGCTGCGGCGCTGTGCCGTCGTCCTGGCCATCTTCTTCGCCCTGTGCTTCCTCGCCAGCTGGCTG CCCACCGCCCTCAGTCCCACCAAGGCCAGTCCGGAGAAGCAGGCCCGAGACCGGCTCTGGGTCGACAGCAGCCCC TACTTCGTCGACCGCCAATTGTGCCGATGGATGAGCCTCTGCGGCCTCCATCACCTCAAGAGCGATCCCGCCGCC CTCCCCGGCCCTGACGCCGGGCCGCCCCCCGACGAATGGCGCGAGCTGCGCAGGAGGTCCCCCGGTCCCGGCCCC GGCCCCGACCCCGACGCCACCCAACGCCGCCGCGCCGACAAGAGGACCAACACGCGCGAGAGGCGGAGGATAGTC AAGGACATCCCCGACTACGTCACCAAGTACGCGCCCCTCGTCCACCTCTACTCGGGCGAGCAGTTCTGGCCGTCG GACATCGCCGAGCACGTCCGCCACATGAACGTCACCCTCGACCACGAGCTCCTCGACCGCCCGCTGCCCCTGACG CTCGACAGCCTGGCCGAGCTCAACGGCCACCGCGGCACCGTCGCCCTGCACAGCCTCGACGACCGGCGAGGACGT CTCGGCCCCCGGCCGCGAGCGCACCACCTGGTTTGA
Gene	>Hirsu2\|4092 ATGTGGCGCTGGCTGCGGCGCTGTGCCGTCGTCCTGGCCATCTTCTTCGCCCTGTGCTTCCTCGCCAGCTGGCTG CCCACCGCCCTCAGTCCCACCAAGGCCAGTCCGGAGAAGCAGGCCCGAGACCGGCTCTGGGTCGACAGCAGCCCC TACTTCGTCGACCGCCAATTGTGCCGATGGATGAGCCTCTGCGGCCTCCATCACCTCAAGAGCGATCCCGCCGCC CTCCCCGGCCCTGACGCCGGGCCGCCCCCCGACGAATGGCGCGAGCTGCGCAGGAGGTCCCCCGGTCCCGGCCCC GGCCCCGACCCCGACGCCACCCAACGCCGCCGCGCCGACAAGAGGACCAACACGCGCGAGAGGCGGAGGATAGTC AAGGACATCCCCGACTACGTCACCAAGTACGCGCCCCTCGTCCACCTCTACTCGGGCGAGCAGTTCTGGCCGTCG GACATCGCCGAGCACGTCCGCCACATGAACGTCACCCTCGACCACGAGCTCCTCGACCGCCCGCTGCCCCTGACG CTCGACAGCCTGGCCGAGCTCAACGGCCACCGCGGCACCGTCGCCCTGCACAGCCTCGACGACGTCGAGTCCCGC CCCGCCTGGCTGCACAGCCGCCCCAACCTGCCCGAGCCCTTCCCGGACGGCGACGGCGACGGCGACGGCGACGAC CACCAGGACCCCCTGGTCGGCAGCGGCGAGGACGTCTCGGCCCCCGGCCGCGAGCGCACCACCTGGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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