© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|409 |
| Gene name | |
| Location | Contig_108:34391..35304 |
| Strand | - |
| Gene length (bp) | 913 |
| Transcript length (bp) | 795 |
| Coding sequence length (bp) | 795 |
| Protein length (aa) | 265 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20238 | DUF6595 | Family of unknown function (DUF6595) | 3.5E-26 | 42 | 173 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 24 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 204 | 226 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|409 MPSATKKPAAGLALLLAFAAASAEQGDGSRSAAQASAAGGHQTPPSESVWSGTMGSQEPCGSSAAPGARTRFPLK NGAVAVVARDDYHDSKISISYSDNPERNGDFIPLVETSGMSRPGPGQSCIPIPDAPATAPAGANATLQITYRGDG QPLYACADITYVAPDEFGERVPCLAMTRPADDGRGPARKLEAADDGSTKLGSGAIAGVTIGSLAGLTLVAAVLLF LCRRRRQKSRKPRPGRTPGNARRDRFAADNKYSPSQNSV* |
| Coding | >Hirsu2|409 ATGCCGTCCGCCACGAAGAAGCCGGCCGCTGGCCTGGCGTTGCTGCTCGCCTTCGCCGCCGCTTCTGCCGAGCAA GGCGACGGCAGCAGGTCCGCGGCCCAGGCGTCGGCCGCCGGCGGTCATCAGACGCCTCCCAGCGAAAGCGTCTGG TCCGGAACCATGGGCAGCCAGGAGCCCTGCGGCTCGAGTGCGGCGCCGGGCGCCAGGACGCGGTTCCCCCTGAAG AACGGAGCGGTGGCGGTTGTGGCCAGGGACGACTACCACGACAGCAAGATCAGCATCTCCTACTCCGACAACCCG GAGCGCAACGGCGACTTCATCCCGCTGGTCGAGACGTCCGGCATGTCCCGGCCCGGCCCCGGCCAGAGCTGCATC CCGATCCCCGACGCCCCGGCCACGGCCCCGGCCGGCGCCAACGCCACCCTGCAAATCACCTACAGGGGCGACGGC CAGCCGCTGTACGCCTGCGCCGACATCACCTACGTCGCCCCGGACGAGTTCGGGGAGCGCGTCCCGTGCCTCGCC ATGACGCGGCCCGCCGACGACGGCCGCGGACCGGCCCGCAAGCTCGAGGCCGCCGACGACGGCTCCACCAAGCTG GGCAGCGGCGCCATCGCCGGCGTCACCATCGGCTCCCTCGCCGGCCTGACCCTCGTCGCCGCCGTCCTGCTCTTC CTCTGCCGCCGCCGCCGGCAGAAGAGCCGCAAGCCGCGTCCCGGCCGCACGCCCGGCAATGCCCGCCGGGACCGG TTCGCCGCGGACAACAAGTATTCGCCTTCGCAAAATAGCGTGTGA |
| Transcript | >Hirsu2|409 ATGCCGTCCGCCACGAAGAAGCCGGCCGCTGGCCTGGCGTTGCTGCTCGCCTTCGCCGCCGCTTCTGCCGAGCAA GGCGACGGCAGCAGGTCCGCGGCCCAGGCGTCGGCCGCCGGCGGTCATCAGACGCCTCCCAGCGAAAGCGTCTGG TCCGGAACCATGGGCAGCCAGGAGCCCTGCGGCTCGAGTGCGGCGCCGGGCGCCAGGACGCGGTTCCCCCTGAAG AACGGAGCGGTGGCGGTTGTGGCCAGGGACGACTACCACGACAGCAAGATCAGCATCTCCTACTCCGACAACCCG GAGCGCAACGGCGACTTCATCCCGCTGGTCGAGACGTCCGGCATGTCCCGGCCCGGCCCCGGCCAGAGCTGCATC CCGATCCCCGACGCCCCGGCCACGGCCCCGGCCGGCGCCAACGCCACCCTGCAAATCACCTACAGGGGCGACGGC CAGCCGCTGTACGCCTGCGCCGACATCACCTACGTCGCCCCGGACGAGTTCGGGGAGCGCGTCCCGTGCCTCGCC ATGACGCGGCCCGCCGACGACGGCCGCGGACCGGCCCGCAAGCTCGAGGCCGCCGACGACGGCTCCACCAAGCTG GGCAGCGGCGCCATCGCCGGCGTCACCATCGGCTCCCTCGCCGGCCTGACCCTCGTCGCCGCCGTCCTGCTCTTC CTCTGCCGCCGCCGCCGGCAGAAGAGCCGCAAGCCGCGTCCCGGCCGCACGCCCGGCAATGCCCGCCGGGACCGG TTCGCCGCGGACAACAAGTATTCGCCTTCGCAAAATAGCGTGTGA |
| Gene | >Hirsu2|409 ATGCCGTCCGCCACGAAGAAGCCGGCCGCTGGCCTGGCGTTGCTGCTCGCCTTCGCCGCCGCTTCTGCCGAGCAA GGCGACGGCAGCAGGTCCGCGGCCCAGGCGTCGGCCGCCGGCGGTCATCAGACGCCTCCCAGCGAAAGCGTCTGG TCCGGAACCATGGGCAGCCAGGAGCCCTGCGGCTCGAGTGCGGCGCCGGGCGCCAGGACGCGGTTCCCCCTGAGT GCGTTCATCATCACCGTCCTCGTCTCCCCTTTGACGCCGTTTCGGCTGACCATGTCGGGACAGAGAACGGAGCGG TGGCGGTTGTGGCCAGGGACGACTACCACGACAGCAAGATCAGCATCTCCTACTCCGACAGTACGTCGTCGTCGC TCGTCCGCAGCCCGTTCACTGATTGACCCGCGCGGCAGACCCGGAGCGCAACGGCGACTTCATCCCGCTGGTCGA GACGTCCGGCATGTCCCGGCCCGGCCCCGGCCAGAGCTGCATCCCGATCCCCGACGCCCCGGCCACGGCCCCGGC CGGCGCCAACGCCACCCTGCAAATCACCTACAGGGGCGACGGCCAGCCGCTGTACGCCTGCGCCGACATCACCTA CGTCGCCCCGGACGAGTTCGGGGAGCGCGTCCCGTGCCTCGCCATGACGCGGCCCGCCGACGACGGCCGCGGACC GGCCCGCAAGCTCGAGGCCGCCGACGACGGCTCCACCAAGCTGGGCAGCGGCGCCATCGCCGGCGTCACCATCGG CTCCCTCGCCGGCCTGACCCTCGTCGCCGCCGTCCTGCTCTTCCTCTGCCGCCGCCGCCGGCAGAAGAGCCGCAA GCCGCGTCCCGGCCGCACGCCCGGCAATGCCCGCCGGGACCGGTTCGCCGCGGACAACAAGTATTCGCCTTCGCA AAATAGCGTGTGA |