Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|407
Gene name
LocationContig_108:25416..27006
Strand-
Gene length (bp)1590
Transcript length (bp)1257
Coding sequence length (bp)1257
Protein length (aa) 419

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07993 NAD_binding_4 Male sterility protein 5.0E-11 19 121

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

Domain # Start End Length
1 389 411 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|407
MKGAFDTLDFHGRIVFLRGGSGFLETGLAYKLALQSRCKQVIVLCRGGADRLFSRWLEELPRNVFFQVVYSGRIL
AVDGDITEAGLGLHPRVLASIQAELHIVIHARSSISLRAPLSRMVNSVIVDSCNTPFPWPYAYVKNLTERLLVHR
FCEARDVMPGGRTPDNSFSFKGSKLLIIQPLVVGAASEYPAPGWQIATSTPSKMLALRLVLVYSKDLVFPSRFAQ
PEQESTIDEVPVDIVVNLILAHAAAGTAGIVHAVAGHGNGVPSVRKNVDWKSAQLSQVTRFYKILGASANFRQQQ
TENPWSSMSKGKKRRWPLFPFVGRSGLTKQNFAARENGLMKVLGDYFRSKGWPRSAVKLVLRSADVTEAGSSEPV
HLSGLARCALGPMVFFLSLPMTCALCLIALVYVGFIKGHPSGF*
Coding >Hirsu2|407
ATGAAAGGGGCATTCGACACGCTGGATTTTCACGGCAGAATAGTCTTTTTGAGAGGAGGATCTGGCTTTCTGGAA
ACGGGGCTTGCCTACAAGCTTGCCTTACAGAGTCGCTGCAAGCAAGTCATCGTCCTCTGCCGCGGGGGAGCCGAT
CGACTATTTTCGCGCTGGCTGGAAGAACTGCCGAGGAATGTCTTCTTCCAGGTGGTTTACAGTGGAAGAATCCTC
GCCGTCGACGGCGACATTACCGAGGCCGGCCTCGGTCTCCATCCGAGGGTCCTGGCTTCGATACAGGCTGAGCTG
CACATCGTCATCCACGCGAGATCTTCCATCAGCTTGCGCGCACCGCTGTCCAGGATGGTGAATTCTGTCATTGTC
GATAGCTGCAATACCCCTTTCCCTTGGCCCTATGCCTACGTCAAGAATCTCACCGAGCGTCTCCTTGTCCATCGA
TTTTGCGAGGCTCGAGACGTGATGCCTGGAGGTCGTACGCCCGACAACAGTTTCAGCTTCAAGGGAAGCAAGCTC
CTGATTATACAACCATTGGTCGTCGGTGCGGCTTCAGAATACCCGGCGCCCGGATGGCAGATTGCCACCAGCACG
CCGAGCAAAATGCTGGCTCTTAGATTAGTGCTGGTCTACTCTAAAGATCTCGTTTTCCCTTCGAGATTCGCGCAG
CCGGAGCAAGAATCGACCATCGACGAAGTCCCGGTGGACATTGTAGTAAATCTCATCCTGGCTCATGCCGCAGCC
GGCACGGCTGGCATTGTGCATGCCGTCGCGGGCCACGGCAATGGGGTTCCCTCGGTGAGGAAGAATGTAGATTGG
AAATCAGCTCAGCTGAGCCAAGTTACCCGATTTTACAAAATCTTGGGCGCCTCGGCTAACTTTCGGCAGCAGCAA
ACAGAGAACCCATGGTCTAGCATGTCCAAAGGGAAGAAACGACGTTGGCCCCTGTTCCCCTTCGTCGGGAGATCA
GGCTTGACGAAGCAAAACTTTGCTGCAAGAGAAAACGGCTTGATGAAGGTTTTGGGTGACTATTTTCGCAGCAAG
GGATGGCCGCGGAGCGCCGTCAAGTTGGTTCTTCGTTCGGCAGACGTCACCGAGGCTGGTTCGTCGGAGCCTGTG
CATCTTTCTGGCTTGGCTCGTTGTGCTTTGGGCCCGATGGTTTTCTTCTTGTCCCTTCCAATGACCTGTGCCCTG
TGTCTTATTGCACTCGTCTACGTGGGCTTCATTAAAGGACATCCGAGCGGCTTTTGA
Transcript >Hirsu2|407
ATGAAAGGGGCATTCGACACGCTGGATTTTCACGGCAGAATAGTCTTTTTGAGAGGAGGATCTGGCTTTCTGGAA
ACGGGGCTTGCCTACAAGCTTGCCTTACAGAGTCGCTGCAAGCAAGTCATCGTCCTCTGCCGCGGGGGAGCCGAT
CGACTATTTTCGCGCTGGCTGGAAGAACTGCCGAGGAATGTCTTCTTCCAGGTGGTTTACAGTGGAAGAATCCTC
GCCGTCGACGGCGACATTACCGAGGCCGGCCTCGGTCTCCATCCGAGGGTCCTGGCTTCGATACAGGCTGAGCTG
CACATCGTCATCCACGCGAGATCTTCCATCAGCTTGCGCGCACCGCTGTCCAGGATGGTGAATTCTGTCATTGTC
GATAGCTGCAATACCCCTTTCCCTTGGCCCTATGCCTACGTCAAGAATCTCACCGAGCGTCTCCTTGTCCATCGA
TTTTGCGAGGCTCGAGACGTGATGCCTGGAGGTCGTACGCCCGACAACAGTTTCAGCTTCAAGGGAAGCAAGCTC
CTGATTATACAACCATTGGTCGTCGGTGCGGCTTCAGAATACCCGGCGCCCGGATGGCAGATTGCCACCAGCACG
CCGAGCAAAATGCTGGCTCTTAGATTAGTGCTGGTCTACTCTAAAGATCTCGTTTTCCCTTCGAGATTCGCGCAG
CCGGAGCAAGAATCGACCATCGACGAAGTCCCGGTGGACATTGTAGTAAATCTCATCCTGGCTCATGCCGCAGCC
GGCACGGCTGGCATTGTGCATGCCGTCGCGGGCCACGGCAATGGGGTTCCCTCGGTGAGGAAGAATGTAGATTGG
AAATCAGCTCAGCTGAGCCAAGTTACCCGATTTTACAAAATCTTGGGCGCCTCGGCTAACTTTCGGCAGCAGCAA
ACAGAGAACCCATGGTCTAGCATGTCCAAAGGGAAGAAACGACGTTGGCCCCTGTTCCCCTTCGTCGGGAGATCA
GGCTTGACGAAGCAAAACTTTGCTGCAAGAGAAAACGGCTTGATGAAGGTTTTGGGTGACTATTTTCGCAGCAAG
GGATGGCCGCGGAGCGCCGTCAAGTTGGTTCTTCGTTCGGCAGACGTCACCGAGGCTGGTTCGTCGGAGCCTGTG
CATCTTTCTGGCTTGGCTCGTTGTGCTTTGGGCCCGATGGTTTTCTTCTTGTCCCTTCCAATGACCTGTGCCCTG
TGTCTTATTGCACTCGTCTACGTGGGCTTCATTAAAGGACATCCGAGCGGCTTTTGA
Gene >Hirsu2|407
ATGAAAGGGGCATTCGACACGCTGGATTTTCACGGCAGAATAGTCTTTTTGAGAGGAGGATCTGGCTTTCTGGAA
ACGGGGCTTGCCTACAAGCTTGCCTTACAGAGTCGCTGCAAGCAAGTCATCGTCCTCTGCCGCGGGGGAGCCGAG
TACGTTCTCCTCCAGTCGTTGGACAAATCATTCTCTAACTTGGCATATTGTAGTCGACTATTTTCGCGCTGGCTG
GAAGAACTGCCGAGGAATGTCTTCTTCCAGGTGGTTTACAGTGGAAGAATCCTCGCCGTCGACGGCGACATTACC
GAGGCCGGCCTCGGTCTCCATCCGAGGGTCCTGGCTTCGATACAGGCTGAGCTGCACATCGTCATCCACGCGAGA
TCTTCCATCAGCTTGCGCGCACCGCTGTCCAGGATGGTGAATTCTGTCATTGTCGATAGCTGGTAGGTGGCAAAA
TTTGCCTCGAGTTGTCCGAAGCTGGGCCAATTCGTCTATGTTTCCATACATAGCCTATGTGAAGCACCTTCCTTC
ACCCGCTACAAGACAACATGGACACCATCGTGGACGAACGAATAGAGCCCCTCCCGTGCCAAGACGGCATAACTT
GGACACGACCGACTGCAAGTGGAAGAGGATCAAAGATGCAGGTTTTTGCTCGCAATATAGCAATACCCCTTTCCC
TTGGCCCTATGCCTACGTCAAGAATCTCACCGAGCGTCTCCTTGTCCATCGATTTTGCGAGGCTCGAGACGTGAT
GCCTGGAGGTCGTACGCCCGACAACAGTTTCAGCTTCAAGGGAAGCAAGCTCCTGATTATACAACCATTGGTCGT
CGGTGCGGCTTCAGAATACCCGGCGCCCGGATGGCAGATTGCCACCAGCACGCCGAGCAAAATGCTGGCTCTTAG
ATTAGTGCTGGTCTACTCTAAAGATCTCGTTTTCCCTTCGAGATTCGCGCAGCCGGAGCAAGAATCGACCATCGA
CGAAGTCCCGGTGGACATTGTAGTAAATCTCATCCTGGCTCATGCCGCAGCCGGCACGGCTGGCATTGTGCATGC
CGTCGCGGGCCACGGCAATGGGGTTCCCTCGGGTGAGTATTACCGAACGTTGTGCCGGCACAGACGGTTCGCTGG
ACCCCCGAACTAGTGAGGAAGAATGTAGATTGGAAATCAGCTCAGCTGAGCCAAGTTACCCGATTTTACAAAATC
TTGGGCGCCTCGGCTAACTTTCGGCAGCAGCAAACAGAGAACCCATGGTCTAGCATGTCCAAAGGGAAGAAACGA
CGTTGGCCCCTGTTCCCCTTCGTCGGGAGATCAGGCTTGACGAAGCAAAACTTTGCTGCAAGAGAAAACGGCTTG
ATGAAGGTTTTGGGTGACTATTTTCGCAGCAAGGGATGGCCGCGGAGCGCCGTCAAGTTGGTTCTTCGTTCGGCA
GACGTCACCGAGGCTGGTTCGTCGGAGCCTGTGCATCTTTCTGGCTTGGCTCGTTGTGCTTTGGGCCCGATGGTT
TTCTTCTTGTCCCTTCCAATGACCTGTGCCCTGTGTCTTATTGCACTCGTCTACGTGGGCTTCATTAAAGGACAT
CCGAGCGGCTTTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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