Protein ID | Hirsu2|404 |
Gene name | |
Location | Contig_108:14718..16966 |
Strand | + |
Gene length (bp) | 2248 |
Transcript length (bp) | 1800 |
Coding sequence length (bp) | 1800 |
Protein length (aa) | 600 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 5.0E-09 | 67 | 275 |
GO Term | Description | Terminal node |
---|---|---|
GO:0090729 | toxin activity | Yes |
GO:0005615 | extracellular space | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular|Lysosome/Vacuole | Signal peptide | 0.212 | 0.1678 | 0.7163 | 0.2331 | 0.1072 | 0.1265 | 0.5786 | 0.5784 | 0.3707 | 0.0286 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 28 | 0.999646 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 9 | 28 | 19 |
2 | 116 | 133 | 17 |
3 | 347 | 364 | 17 |
Orthofinder run ID | 4 |
Orthogroup | 6626 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|404 MAMFQKRQVILLLSLALCLILGPSSSLASSPSGNGNDGSQVLKQSTKSYQPSTSSNKQTSNQKPKYVFRGDHKPP LSIEENGIPPSMEPREVPEAISFTLRNHMDDLMNMSTGLKMTAYVSTTTSLGVAVGFGQRKANTGMARAQGWVYR IRVTPNMVDMARSLHPSEGGQQEREYSALGGIRAADIADAVRIPRKFFFEVSSDVPDMEWDELVKKLEEYWNNHP SEAWRWQNENYHDNNSPVPEISGHPLLVGLRIPGDPSWKEEPYRSIRPEDRISSQDYARGFMERAGAPNGWLPDY PLFEPLAPESGQLDEAAGFDFDALDLPEHYREDLEDQRRRGIDCTALIAALLAILPLMGRIIGARRSLNKLQMIH SSGYWVWKELDLSQYPGAKKKTVALRDLDRVQLSAAGHQSGPRNDWFELEGTTPLRTWYRHEKTDLISDQLKDQT VATFSFSREDWHLSPPCDSFDKLQFFIRFSSDHWSGTYDTISVHIGNHGTFVASGPWPGYEKWVDIDLQKAFDKK VVSVREVDYFSLIDIAYGDWSEKDKWKYAGMSNVQLAVRSASRKPDSSCLIRDETARNLRWFVYGRRSQGKKYG* |
Coding | >Hirsu2|404 ATGGCTATGTTTCAGAAAAGACAGGTCATCCTGCTCCTATCACTTGCCCTCTGTTTGATTTTGGGCCCGAGCAGC AGCTTGGCTTCTTCACCGTCGGGAAACGGGAATGACGGCTCGCAAGTACTGAAACAATCCACAAAAAGCTATCAG CCGTCAACGTCGAGCAACAAGCAGACGTCGAATCAGAAACCCAAATATGTCTTCCGCGGAGATCACAAGCCCCCA TTGTCCATTGAAGAAAATGGAATCCCGCCGAGTATGGAGCCGAGAGAGGTTCCTGAGGCAATCTCATTCACTTTG CGCAACCACATGGACGATTTGATGAACATGTCAACAGGTTTAAAGATGACAGCCTACGTCTCGACCACCACATCG CTCGGTGTTGCAGTGGGCTTCGGTCAAAGAAAAGCAAATACGGGAATGGCCAGAGCGCAGGGCTGGGTTTATCGG ATCCGTGTGACTCCCAATATGGTTGATATGGCAAGGTCTCTTCATCCTTCCGAAGGCGGCCAGCAGGAACGGGAA TACTCGGCTTTGGGAGGCATACGCGCCGCCGATATTGCCGATGCGGTCAGAATACCACGAAAATTCTTCTTTGAA GTTAGCAGCGACGTTCCTGACATGGAATGGGATGAACTGGTTAAGAAATTGGAAGAGTATTGGAACAATCATCCA TCAGAGGCTTGGCGTTGGCAAAATGAGAATTACCACGATAACAACAGTCCGGTCCCTGAGATTTCTGGACATCCA TTGCTGGTCGGACTGCGAATACCAGGCGATCCGAGCTGGAAAGAAGAACCATACAGGTCCATCAGGCCGGAGGAC CGTATTTCATCCCAAGATTATGCGAGAGGTTTCATGGAAAGAGCTGGAGCGCCCAATGGCTGGCTACCAGACTAT CCGTTATTCGAACCTTTGGCACCGGAAAGTGGACAACTGGATGAAGCTGCCGGATTTGACTTCGATGCATTGGAT CTGCCTGAGCATTACCGGGAAGACCTGGAAGACCAACGACGACGAGGAATTGACTGCACAGCTTTGATCGCAGCG CTTCTCGCGATCTTGCCTTTGATGGGCCGCATAATCGGGGCTCGCCGGTCGTTGAACAAGTTGCAGATGATCCAT TCCAGTGGCTACTGGGTATGGAAAGAGCTGGACCTTTCGCAGTATCCCGGGGCCAAGAAGAAGACCGTAGCGCTT CGCGACCTCGACCGCGTTCAACTCTCTGCCGCGGGACACCAATCAGGCCCCCGTAACGATTGGTTTGAGCTTGAA GGCACGACCCCCTTACGGACCTGGTACCGTCATGAAAAGACCGATCTGATTTCGGACCAGCTCAAAGATCAGACC GTCGCCACCTTCTCTTTCTCTCGTGAAGACTGGCACCTGTCTCCACCCTGTGACAGCTTCGACAAGCTGCAGTTT TTTATCCGCTTCTCCTCGGACCACTGGTCCGGAACGTACGACACTATATCGGTTCACATCGGGAACCATGGGACT TTTGTCGCTTCCGGACCTTGGCCGGGATACGAGAAATGGGTCGATATCGATCTTCAGAAAGCTTTCGACAAGAAA GTTGTTTCCGTGCGCGAGGTGGATTATTTTTCGCTAATTGATATTGCCTATGGCGACTGGTCAGAAAAAGACAAG TGGAAGTATGCAGGTATGTCAAACGTCCAACTCGCTGTACGATCGGCAAGTCGGAAACCTGACTCCTCGTGTTTG ATCAGAGATGAAACTGCGAGGAACCTGCGCTGGTTCGTCTACGGTCGCCGAAGTCAGGGTAAAAAATACGGATAA |
Transcript | >Hirsu2|404 ATGGCTATGTTTCAGAAAAGACAGGTCATCCTGCTCCTATCACTTGCCCTCTGTTTGATTTTGGGCCCGAGCAGC AGCTTGGCTTCTTCACCGTCGGGAAACGGGAATGACGGCTCGCAAGTACTGAAACAATCCACAAAAAGCTATCAG CCGTCAACGTCGAGCAACAAGCAGACGTCGAATCAGAAACCCAAATATGTCTTCCGCGGAGATCACAAGCCCCCA TTGTCCATTGAAGAAAATGGAATCCCGCCGAGTATGGAGCCGAGAGAGGTTCCTGAGGCAATCTCATTCACTTTG CGCAACCACATGGACGATTTGATGAACATGTCAACAGGTTTAAAGATGACAGCCTACGTCTCGACCACCACATCG CTCGGTGTTGCAGTGGGCTTCGGTCAAAGAAAAGCAAATACGGGAATGGCCAGAGCGCAGGGCTGGGTTTATCGG ATCCGTGTGACTCCCAATATGGTTGATATGGCAAGGTCTCTTCATCCTTCCGAAGGCGGCCAGCAGGAACGGGAA TACTCGGCTTTGGGAGGCATACGCGCCGCCGATATTGCCGATGCGGTCAGAATACCACGAAAATTCTTCTTTGAA GTTAGCAGCGACGTTCCTGACATGGAATGGGATGAACTGGTTAAGAAATTGGAAGAGTATTGGAACAATCATCCA TCAGAGGCTTGGCGTTGGCAAAATGAGAATTACCACGATAACAACAGTCCGGTCCCTGAGATTTCTGGACATCCA TTGCTGGTCGGACTGCGAATACCAGGCGATCCGAGCTGGAAAGAAGAACCATACAGGTCCATCAGGCCGGAGGAC CGTATTTCATCCCAAGATTATGCGAGAGGTTTCATGGAAAGAGCTGGAGCGCCCAATGGCTGGCTACCAGACTAT CCGTTATTCGAACCTTTGGCACCGGAAAGTGGACAACTGGATGAAGCTGCCGGATTTGACTTCGATGCATTGGAT CTGCCTGAGCATTACCGGGAAGACCTGGAAGACCAACGACGACGAGGAATTGACTGCACAGCTTTGATCGCAGCG CTTCTCGCGATCTTGCCTTTGATGGGCCGCATAATCGGGGCTCGCCGGTCGTTGAACAAGTTGCAGATGATCCAT TCCAGTGGCTACTGGGTATGGAAAGAGCTGGACCTTTCGCAGTATCCCGGGGCCAAGAAGAAGACCGTAGCGCTT CGCGACCTCGACCGCGTTCAACTCTCTGCCGCGGGACACCAATCAGGCCCCCGTAACGATTGGTTTGAGCTTGAA GGCACGACCCCCTTACGGACCTGGTACCGTCATGAAAAGACCGATCTGATTTCGGACCAGCTCAAAGATCAGACC GTCGCCACCTTCTCTTTCTCTCGTGAAGACTGGCACCTGTCTCCACCCTGTGACAGCTTCGACAAGCTGCAGTTT TTTATCCGCTTCTCCTCGGACCACTGGTCCGGAACGTACGACACTATATCGGTTCACATCGGGAACCATGGGACT TTTGTCGCTTCCGGACCTTGGCCGGGATACGAGAAATGGGTCGATATCGATCTTCAGAAAGCTTTCGACAAGAAA GTTGTTTCCGTGCGCGAGGTGGATTATTTTTCGCTAATTGATATTGCCTATGGCGACTGGTCAGAAAAAGACAAG TGGAAGTATGCAGGTATGTCAAACGTCCAACTCGCTGTACGATCGGCAAGTCGGAAACCTGACTCCTCGTGTTTG ATCAGAGATGAAACTGCGAGGAACCTGCGCTGGTTCGTCTACGGTCGCCGAAGTCAGGGTAAAAAATACGGATAA |
Gene | >Hirsu2|404 ATGGCTATGTTTCAGAAAAGACAGGTCATCCTGCTCCTATCACTTGCCCTCTGTTTGATTTTGGGCCCGAGCAGC AGCTTGGCTTCTTCACCGTCGGGAAACGGGAATGACGGCTCGCAAGTACTGAAACAATCCACAAAAAGCTATCAG CCGTCAACGTCGAGCAACAAGCAGACGTCGAATCAGAAACCCAAATATGTCTTCCGCGGAGATCACAAGCCCCCA TTGTCCATTGAAGAAAATGGAATCCCGCCGAGTATGGAGCCGAGAGAGGTTCCTGAGGCAATCTCATTCACTTTG CGCAACCACATGGACGATTTGATGAACATGTCAACAGGTTTAAAGATGACAGCCTACGTCTCGACCACCACATCG CTCGGTGTTGCAGTGGGCTTCGGTCAAAGAAAAGCAAATACGGGAATGGCCAGAGCGCAGGGCTGGGTTTATCGG ATCCGTGTGACTCCCAATATGGTTGATATGGCAAGGTCTCTTCATCCTTCCGAAGGCGGCCAGCAGGAACGGGAA TACTCGGCTTTGGGAGGCATACGCGCCGCCGATATTGCCGATGCGGTCAGAATACCACGAAAATTCTTCTTTGAA GTTAGCAGCGACGTTCCTGACATGGAATGGGATGAACTGGTTAAGAAATTGGAAGAGTATTGGAACAATCATCCA TCAGAGGCTTGGCGTTGGCAAAATGAGAATTACCACGATAACAACAGTCCGGTCCCTGAGATTTCTGGACATCCA TTGCTGGTCGGACTGCGAATACCAGGCGATCCGAGCTGGAAAGAAGAACCATACAGGTCCATCAGGCCGGAGGAC CGTATTTCATCCCAAGATTATGCGAGAGGTTTCATGGAAAGAGCTGGAGCGCCCAATGGCTGGCTACCAGACTAT CCGTTATTCGAACCTTTGGGTAAGGCAGCTCCGTACGAAATTTGGGAGATAGCTAATGCTGATACATTGCCACGA TGAACAGCACCGGAAAGTGGACAACTGGATGAAGCTGCCGGATTTGACTTCGATGCATTGGATCTGCCTGAGCAT TACCGGGAAGACCTGGAAGACCAACGACGACGAGGAATTGACTGCACAGCTTTGATCGCAGCGCTTCTCGCGATG TATCCGACGCAGCTCCCGAAGAGATCGCTCAGGCTGAGAGGTCGCCACCAAGGTAGAGGCAATCTCGCTGCACGA GGACCAAAACAGACGGGCTGACGAAATATTCTTGCTAATAGATAAGGGTTCATGCAGTGAAGCGAACGAACTGCT GAAGATTGTGAAAATGGACCCATGTCGTCGCATTCATCAGCTGAGAGCTTTTTTCCAGCTGACCAACAGCAGCTC TTCCGGAACGTATGACATTCTTAAGCTTGCCTTTGATGGGCCGCATAATCGGGGCTCGCCGGTCGTTGAACAAGT TGCAGATGATCCATTCCAGTGGCTACTGGGTATGGAAAGAGCTGGACCTTTCGCAGTATCCCGGGGCCAAGAAGA AGACCGTAGCGCTTCGCGACCTCGACCGCGTTCAACTCTCTGCCGCGGGACACCAATCAGGCCCCCGTAACGATT GGTTTGAGCTTGAAGGCACGACCCCCTTAGTAAAGAACCGTTACCTGCTTTCTTCCAATAAGCGCTTCTCTAATA ACGTGTTTCGTTTGAATTAGGCATCACGCTGCGTGCCAAATGCGTTGAATCGGACCGCGAGATCGAACTCGATAA ATTCGCGGCGCAGCGGACCTGGTACCGTCATGAAAAGACCGATCTGATTTCGGACCAGCTCAAAGATCAGACCGT CGCCACCTTCTCTTTCTCTCGTGAAGACTGGCACCTGTCTCCACCCTGTGACAGCTTCGACAAGCTGCAGTTTTT TATCCGCTTCTCCTCGGACCACTGGTCCGGAACGTACGACACTATATCGGTTCACATCGGGAACCATGGGACTTT TGTCGCTTCCGGACCTTGGCCGGGATACGAGAAATGGGTCGATATCGATCTTCAGAAAGCTTTCGACAAGAAAGT TGTTTCCGTGCGCGAGGTGGATTATTTTTCGCTAATTGATATTGCCTATGGCGACTGGTCAGAAAAAGACAAGTG GAAGTATGCAGGTATGTCAAACGTCCAACTCGCTGTACGATCGGCAAGTCGGAAACCTGACTCCTCGTGTTTGAT CAGAGATGAAACTGCGAGGAACCTGCGCTGGTTCGTCTACGGTCGCCGAAGTCAGGGTAAAAAATACGGATAA |