Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4032
Gene name
LocationContig_21:22363..23184
Strand+
Gene length (bp)821
Transcript length (bp)657
Coding sequence length (bp)657
Protein length (aa) 219

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide|Transmembrane domain 0.1536 0.2038 0.0453 0.0517 0.116 0.0043 0.9041 0.3303 0.2998 0.0312

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.999688

Transmembrane Domains

Domain # Start End Length
1 178 200 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2633
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2294
Ophiocordyceps australis map64 (Brazil) OphauB2|7495
Ophiocordyceps camponoti-floridani Ophcf2|06574
Ophiocordyceps camponoti-rufipedis Ophun1|6476
Ophiocordyceps kimflemingae Ophio5|291
Ophiocordyceps subramaniannii Hirsu2|4032 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4032
MGGPLLLLLLLLGAASGAVANVEKVIFTGPAAGAGLVLPDRLGALTPAAPVLRTNLSRAADGPGAEAWLLLGDLD
EGRRYELRVCWAAIEPTSFSLQLHDPSSIAATPALARLLAAHALPGPPARRRDATAPARQLLLRIRATADYFADD
ARLMARPPPVLVDLVLDPFLAGLVPRSLAPTLAYLALVALVAWPLARWLVAGLRSAAGSAPGRAEKRD*
Coding >Hirsu2|4032
ATGGGCGGCCCGCTCCTTCTCCTCCTGCTCCTCCTCGGAGCCGCGTCCGGCGCCGTCGCCAACGTCGAAAAGGTC
ATCTTCACCGGCCCGGCCGCCGGGGCCGGCCTCGTCCTGCCCGACCGCCTCGGCGCCCTGACGCCCGCGGCTCCC
GTCCTGAGGACCAACCTCAGCCGCGCGGCTGACGGCCCCGGCGCCGAGGCCTGGCTGCTCCTCGGCGACCTCGAC
GAAGGCCGGCGGTACGAGCTGCGCGTGTGCTGGGCTGCCATTGAACCGACCAGCTTCTCGCTACAGCTGCACGAC
CCGTCCTCCATCGCTGCCACGCCCGCGCTAGCCCGCCTCCTCGCCGCCCACGCCCTACCCGGCCCCCCCGCCCGG
CGCCGCGACGCCACCGCCCCCGCCCGGCAGCTGCTCCTGCGCATCCGCGCCACGGCCGACTACTTCGCCGACGAC
GCGCGCCTCATGGCCCGCCCGCCGCCCGTGCTCGTCGACCTCGTCCTCGACCCGTTCTTGGCCGGCCTCGTACCG
CGCTCGCTCGCCCCGACGCTCGCCTACCTCGCCCTCGTCGCCCTCGTCGCCTGGCCCCTGGCCCGCTGGCTCGTC
GCCGGTCTGCGGTCCGCGGCCGGCTCCGCCCCGGGACGGGCCGAAAAGCGTGACTGA
Transcript >Hirsu2|4032
ATGGGCGGCCCGCTCCTTCTCCTCCTGCTCCTCCTCGGAGCCGCGTCCGGCGCCGTCGCCAACGTCGAAAAGGTC
ATCTTCACCGGCCCGGCCGCCGGGGCCGGCCTCGTCCTGCCCGACCGCCTCGGCGCCCTGACGCCCGCGGCTCCC
GTCCTGAGGACCAACCTCAGCCGCGCGGCTGACGGCCCCGGCGCCGAGGCCTGGCTGCTCCTCGGCGACCTCGAC
GAAGGCCGGCGGTACGAGCTGCGCGTGTGCTGGGCTGCCATTGAACCGACCAGCTTCTCGCTACAGCTGCACGAC
CCGTCCTCCATCGCTGCCACGCCCGCGCTAGCCCGCCTCCTCGCCGCCCACGCCCTACCCGGCCCCCCCGCCCGG
CGCCGCGACGCCACCGCCCCCGCCCGGCAGCTGCTCCTGCGCATCCGCGCCACGGCCGACTACTTCGCCGACGAC
GCGCGCCTCATGGCCCGCCCGCCGCCCGTGCTCGTCGACCTCGTCCTCGACCCGTTCTTGGCCGGCCTCGTACCG
CGCTCGCTCGCCCCGACGCTCGCCTACCTCGCCCTCGTCGCCCTCGTCGCCTGGCCCCTGGCCCGCTGGCTCGTC
GCCGGTCTGCGGTCCGCGGCCGGCTCCGCCCCGGGACGGGCCGAAAAGCGTGACTGA
Gene >Hirsu2|4032
ATGGGCGGCCCGCTCCTTCTCCTCCTGCTCCTCCTCGGAGCCGCGTCCGGCGCCGTCGCCAACGTCGAAAAGGTC
ATCTTCACCGGCCCGGCCGCCGGGGCCGGCCTCGTCCTGCCCGACCGCCTCGGCGCCCTGACGCCCGCGGCTCCC
GTCCTGAGGACCAACCTCAGCCGCGCGGCTGACGGCCCCGGCGCCGAGGCCTGGCTGCTCCTCGGCGACCTCGAC
GAAGGCCGGCGGTACGAGCTGCGCGTGTGCTGGGCTGCCATTGTGAGTCGCGTCCGTGCCGTGATGAAGCCAGAG
AGGGAGCGCGTTCTGGGCCCCCGAAAGAACAGGCCAGAGAGATGAGATATCCGTGTCCCTGAAAAGGCCACGATG
ATAAGATGTCTGTGGAATGCCAAGCCGTCCCCCCAGCTCACCACCACCGCAACCAGGAACCGACCAGCTTCTCGC
TACAGCTGCACGACCCGTCCTCCATCGCTGCCACGCCCGCGCTAGCCCGCCTCCTCGCCGCCCACGCCCTACCCG
GCCCCCCCGCCCGGCGCCGCGACGCCACCGCCCCCGCCCGGCAGCTGCTCCTGCGCATCCGCGCCACGGCCGACT
ACTTCGCCGACGACGCGCGCCTCATGGCCCGCCCGCCGCCCGTGCTCGTCGACCTCGTCCTCGACCCGTTCTTGG
CCGGCCTCGTACCGCGCTCGCTCGCCCCGACGCTCGCCTACCTCGCCCTCGTCGCCCTCGTCGCCTGGCCCCTGG
CCCGCTGGCTCGTCGCCGGTCTGCGGTCCGCGGCCGGCTCCGCCCCGGGACGGGCCGAAAAGCGTGACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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