Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4023
Gene name
LocationContig_21:1464..2808
Strand-
Gene length (bp)1344
Transcript length (bp)1248
Coding sequence length (bp)1248
Protein length (aa) 416

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01263 Aldose_epim Aldose 1-epimerase 2.1E-47 42 383

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D4AMB9|GALM_ARTBC Probable aldose 1-epimerase ARB_05372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05372 PE=1 SV=1 14 405 4.0E-79
sp|Q96C23|GALM_HUMAN Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV=1 36 383 2.0E-35
sp|Q9GKX6|GALM_PIG Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1 36 383 4.0E-35
sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1 36 383 6.0E-35
sp|Q5R8U1|GALM_PONAB Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV=1 36 383 1.0E-33
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Swissprot ID Swissprot Description Start End E-value
sp|D4AMB9|GALM_ARTBC Probable aldose 1-epimerase ARB_05372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05372 PE=1 SV=1 14 405 4.0E-79
sp|Q96C23|GALM_HUMAN Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV=1 36 383 2.0E-35
sp|Q9GKX6|GALM_PIG Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1 36 383 4.0E-35
sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1 36 383 6.0E-35
sp|Q5R8U1|GALM_PONAB Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV=1 36 383 1.0E-33
sp|Q8K157|GALM_MOUSE Aldose 1-epimerase OS=Mus musculus GN=Galm PE=1 SV=1 36 383 1.0E-32
sp|Q66HG4|GALM_RAT Aldose 1-epimerase OS=Rattus norvegicus GN=Galm PE=1 SV=1 36 383 2.0E-32
sp|P05149|GALM_ACICA Aldose 1-epimerase OS=Acinetobacter calcoaceticus GN=mro PE=1 SV=1 42 338 3.0E-28
sp|P0A9C4|GALM_SHIFL Aldose 1-epimerase OS=Shigella flexneri GN=galM PE=3 SV=1 43 404 4.0E-26
sp|P0A9C3|GALM_ECOLI Aldose 1-epimerase OS=Escherichia coli (strain K12) GN=galM PE=1 SV=1 43 404 4.0E-26
sp|P31765|GALM_HAEIN Aldose 1-epimerase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=galM PE=3 SV=2 68 383 5.0E-25
sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gal10 PE=3 SV=1 44 413 2.0E-21
sp|Q03PA4|MALEP_LACBA Maltose epimerase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=LVIS_1908 PE=1 SV=1 43 407 6.0E-16
sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL10 PE=1 SV=2 34 405 2.0E-13
sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2 SV=1 56 345 4.0E-13
sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAL10 PE=2 SV=2 41 404 4.0E-13
sp|P21955|GALM_STRTR Aldose 1-epimerase OS=Streptococcus thermophilus GN=galM PE=3 SV=1 42 380 1.0E-11
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GO

GO Term Description Terminal node
GO:0016853 isomerase activity Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0008150 biological_process No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1118 0.0513 0.8396 0.1001 0.123 0.0294 0.2331 0.4094 0.1732 0.0198

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999484

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5195
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2076
Ophiocordyceps australis map64 (Brazil) OphauB2|7491
Ophiocordyceps camponoti-floridani Ophcf2|06569
Ophiocordyceps camponoti-rufipedis Ophun1|7003
Ophiocordyceps kimflemingae Ophio5|287
Ophiocordyceps subramaniannii Hirsu2|4023 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4023
MRPTWQWLATLVTAASLPLARADDNGGNASPDQDGKYWIYGDGISAAFVAYGASIANLIFRDQYGIERDLVAGFD
NASYYTEDKQHPHLGGVPGRYANRIKNSSFEIDGVRYKVKANENPTADLPHGLDTLHGGPDGWDWRNFSVVDHSH
SSLTFSFVDADGKEGFPGKVISFITYTLTGRDWDINMVAMAVDKKTPIMLSSHTYWNLDGFANNETNTALNHTMH
LPYSGQRVGVDNILVPTGEILSNAKGSVNDFWSKPKQIGASLDDPELENNCGFNCTGYDNCFTVNRAGLGNFNWR
TEGPVATLSSDWSGIQLDVFTNQDAFQLYSCNGQNGTLALKKTQGVQSGDDGNAKGFPRTIPKYGCVVLEVQDYI
DGINHPEWMRKQIYGPSDDPYVLQAKYRFSLKSEHAEKGN*
Coding >Hirsu2|4023
ATGAGGCCGACGTGGCAGTGGCTCGCGACCCTGGTGACGGCGGCTTCGCTGCCATTGGCCCGCGCCGACGACAAC
GGCGGCAACGCCTCGCCCGACCAGGACGGCAAGTACTGGATCTACGGCGACGGCATCTCGGCCGCCTTCGTCGCC
TACGGAGCGTCCATCGCCAACCTCATTTTCCGGGACCAGTACGGCATCGAGCGTGACCTCGTCGCCGGCTTCGAC
AATGCCTCCTACTACACCGAGGACAAGCAGCACCCTCATTTGGGCGGCGTCCCCGGCCGCTATGCCAATCGCATC
AAGAACAGCTCCTTCGAGATCGACGGCGTCCGGTACAAGGTCAAGGCCAACGAGAACCCCACGGCCGACTTGCCC
CACGGCCTCGACACCCTGCACGGCGGGCCCGATGGCTGGGATTGGCGCAACTTCAGCGTCGTCGACCATAGCCAC
TCCAGCCTCACCTTCTCCTTCGTCGATGCCGACGGCAAGGAGGGCTTCCCCGGCAAGGTCATCTCCTTCATCACC
TACACCCTCACCGGCCGCGACTGGGACATCAATATGGTGGCCATGGCCGTAGACAAGAAGACGCCCATCATGCTC
AGCAGCCACACCTACTGGAACCTGGACGGCTTCGCCAATAACGAGACCAACACGGCCCTCAACCACACCATGCAC
CTGCCCTATAGCGGCCAGCGCGTCGGCGTCGACAACATCCTCGTCCCCACCGGCGAGATCCTCTCCAACGCAAAG
GGCTCCGTTAACGACTTCTGGAGCAAGCCCAAGCAGATCGGCGCGTCACTCGACGACCCGGAGCTGGAAAATAAC
TGCGGCTTCAACTGCACCGGCTACGACAATTGCTTCACAGTCAACCGCGCCGGTCTCGGAAACTTCAACTGGCGC
ACCGAAGGGCCTGTCGCGACCCTGTCCTCGGACTGGTCGGGCATCCAGCTCGACGTCTTCACCAACCAGGACGCC
TTCCAGCTGTACTCGTGCAACGGCCAGAACGGCACCTTGGCGCTGAAGAAGACGCAGGGCGTCCAGAGCGGTGAC
GACGGAAACGCCAAGGGCTTTCCGCGCACCATTCCCAAGTACGGCTGTGTTGTGCTCGAGGTCCAGGACTATATC
GACGGCATCAACCACCCCGAGTGGATGCGCAAGCAGATTTATGGCCCCTCAGACGACCCCTACGTGCTTCAGGCC
AAATACAGGTTCAGCCTCAAGTCGGAGCACGCGGAGAAGGGCAACTAA
Transcript >Hirsu2|4023
ATGAGGCCGACGTGGCAGTGGCTCGCGACCCTGGTGACGGCGGCTTCGCTGCCATTGGCCCGCGCCGACGACAAC
GGCGGCAACGCCTCGCCCGACCAGGACGGCAAGTACTGGATCTACGGCGACGGCATCTCGGCCGCCTTCGTCGCC
TACGGAGCGTCCATCGCCAACCTCATTTTCCGGGACCAGTACGGCATCGAGCGTGACCTCGTCGCCGGCTTCGAC
AATGCCTCCTACTACACCGAGGACAAGCAGCACCCTCATTTGGGCGGCGTCCCCGGCCGCTATGCCAATCGCATC
AAGAACAGCTCCTTCGAGATCGACGGCGTCCGGTACAAGGTCAAGGCCAACGAGAACCCCACGGCCGACTTGCCC
CACGGCCTCGACACCCTGCACGGCGGGCCCGATGGCTGGGATTGGCGCAACTTCAGCGTCGTCGACCATAGCCAC
TCCAGCCTCACCTTCTCCTTCGTCGATGCCGACGGCAAGGAGGGCTTCCCCGGCAAGGTCATCTCCTTCATCACC
TACACCCTCACCGGCCGCGACTGGGACATCAATATGGTGGCCATGGCCGTAGACAAGAAGACGCCCATCATGCTC
AGCAGCCACACCTACTGGAACCTGGACGGCTTCGCCAATAACGAGACCAACACGGCCCTCAACCACACCATGCAC
CTGCCCTATAGCGGCCAGCGCGTCGGCGTCGACAACATCCTCGTCCCCACCGGCGAGATCCTCTCCAACGCAAAG
GGCTCCGTTAACGACTTCTGGAGCAAGCCCAAGCAGATCGGCGCGTCACTCGACGACCCGGAGCTGGAAAATAAC
TGCGGCTTCAACTGCACCGGCTACGACAATTGCTTCACAGTCAACCGCGCCGGTCTCGGAAACTTCAACTGGCGC
ACCGAAGGGCCTGTCGCGACCCTGTCCTCGGACTGGTCGGGCATCCAGCTCGACGTCTTCACCAACCAGGACGCC
TTCCAGCTGTACTCGTGCAACGGCCAGAACGGCACCTTGGCGCTGAAGAAGACGCAGGGCGTCCAGAGCGGTGAC
GACGGAAACGCCAAGGGCTTTCCGCGCACCATTCCCAAGTACGGCTGTGTTGTGCTCGAGGTCCAGGACTATATC
GACGGCATCAACCACCCCGAGTGGATGCGCAAGCAGATTTATGGCCCCTCAGACGACCCCTACGTGCTTCAGGCC
AAATACAGGTTCAGCCTCAAGTCGGAGCACGCGGAGAAGGGCAACTAA
Gene >Hirsu2|4023
ATGAGGCCGACGTGGCAGTGGCTCGCGACCCTGGTGACGGCGGCTTCGCTGCCATTGGCCCGCGCCGACGACAAC
GGCGGCAACGCCTCGCCCGACCAGGACGGCAAGTACTGGATCTACGGCGACGGCATCTCGGCCGCCTTCGTCGCC
TACGGAGCGTCCATCGCCAACCTCATTTTCCGGGACCAGTACGGCATCGAGCGTGACCTCGTCGCCGGCTTCGAC
AATGCCTCCTACTACACCGAGGACAAGCAGCACCCTCATTTGGGCGGCGTCCCCGGCCGCTATGCCAATCGCATC
AAGAACAGCTCCTTCGAGATCGACGGCGTCCGGTACAAGGTCAAGGCCAACGAGAACCCCACGGCCGACTTGCCC
CACGGCCTCGACACCCTGCACGGCGGGCCCGATGGCTGGGATTGGCGCAACTTCAGCGTCGTCGACCATAGCCAC
TCCAGCCTCACCTTCTCCTTCGTCGATGCCGACGGCAAGGAGGGCTTCCCCGGCAAGGTCATCTCCTTCATCACC
TACACCCTCACCGGCCGCGACTGGGACATCAATATGGTGGCCATGGCCGTAGACAAGAAGACGCCCATCATGCTC
AGCAGCCACACCTACTGGAACCTGGACGGCTTCGCCAATAACGAGACCAACACGGCCCTCAACCACACCATGCAC
CTGCCCTATAGCGGCCAGCGCGTCGGCGTCGACAACATCCTCGTCCCCACCGGCGAGATCCTCTCCAACGCAAAG
GGCTCCGTTAACGACTTCTGGAGCAAGCCCAAGCAGATCGGCGCGTCACTCGACGACCCGGAGCTGGAAAATAAC
TGCGGCTTCAACTGCACCGGCTACGGTACGTCGCTAGGAGGATGGACGGGGGGGGATTCTATTTTATTTTCTTTT
TTTTTTCCTGTCCTTGCTGACCATAGGCATCTTCGCCATCACGCAGACAATTGCTTCACAGTCAACCGCGCCGGT
CTCGGAAACTTCAACTGGCGCACCGAAGGGCCTGTCGCGACCCTGTCCTCGGACTGGTCGGGCATCCAGCTCGAC
GTCTTCACCAACCAGGACGCCTTCCAGCTGTACTCGTGCAACGGCCAGAACGGCACCTTGGCGCTGAAGAAGACG
CAGGGCGTCCAGAGCGGTGACGACGGAAACGCCAAGGGCTTTCCGCGCACCATTCCCAAGTACGGCTGTGTTGTG
CTCGAGGTCCAGGACTATATCGACGGCATCAACCACCCCGAGTGGATGCGCAAGCAGATTTATGGCCCCTCAGAC
GACCCCTACGTGCTTCAGGCCAAATACAGGTTCAGCCTCAAGTCGGAGCACGCGGAGAAGGGCAACTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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