Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|4021
Gene name
Location	Contig_2099:2606..3254
Strand	-
Gene length (bp)	648
Transcript length (bp)	567
Coding sequence length (bp)	567
Protein length (aa)	189

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF14618	DUF4452	Domain of unknown function (DUF4452)	2.2E-76	22	184

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q10296\|YD42_SCHPO	Uncharacterized protein C22H10.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22H10.02 PE=1 SV=2	59	164	6.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 31	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|4021 MASYYHYNAQAAHAAPISHNNHHGGGRNRRAPRLSVSHNPQRQFRGARSLKDLNESAALSAFRVKFEAGRSFELE DDLEFCPNLLTDTDLVSMSSASERSSLASNSPESSPTQQPQTVAPAFSLNSSSPAFIPPSFQGQQSSLKLDQPSA TRGRNAIPIVNPATGISMSSPPPSVSPAAMQQSLARRW*
Coding	>Hirsu2\|4021 ATGGCTTCATACTACCATTACAATGCCCAGGCGGCACACGCGGCGCCCATTTCGCATAATAACCACCACGGCGGC GGGCGGAACCGCCGGGCGCCCCGCCTGTCCGTCTCACACAATCCGCAGAGGCAGTTCCGTGGCGCTCGCAGCCTC AAGGACCTCAACGAGTCGGCGGCCCTGTCCGCCTTCCGCGTCAAGTTTGAAGCAGGCCGCTCCTTTGAGCTTGAG GACGACCTCGAGTTCTGCCCCAACCTGTTGACAGACACCGACCTGGTGTCCATGTCCAGTGCCTCGGAACGTTCG TCACTGGCGAGCAACTCGCCCGAGTCGTCCCCTACGCAACAACCGCAAACCGTCGCGCCCGCCTTCTCCCTCAAC TCGTCCTCTCCCGCCTTCATCCCCCCCAGCTTCCAGGGCCAACAATCCAGCCTCAAACTTGACCAACCCTCGGCT ACCCGTGGTCGAAACGCCATTCCCATCGTCAACCCGGCCACCGGCATCTCCATGTCCAGCCCACCGCCCTCTGTG TCGCCCGCCGCGATGCAGCAGTCGCTCGCCCGCCGATGGTAG
Transcript	>Hirsu2\|4021 ATGGCTTCATACTACCATTACAATGCCCAGGCGGCACACGCGGCGCCCATTTCGCATAATAACCACCACGGCGGC GGGCGGAACCGCCGGGCGCCCCGCCTGTCCGTCTCACACAATCCGCAGAGGCAGTTCCGTGGCGCTCGCAGCCTC AAGGACCTCAACGAGTCGGCGGCCCTGTCCGCCTTCCGCGTCAAGTTTGAAGCAGGCCGCTCCTTTGAGCTTGAG GACGACCTCGAGTTCTGCCCCAACCTGTTGACAGACACCGACCTGGTGTCCATGTCCAGTGCCTCGGAACGTTCG TCACTGGCGAGCAACTCGCCCGAGTCGTCCCCTACGCAACAACCGCAAACCGTCGCGCCCGCCTTCTCCCTCAAC TCGTCCTCTCCCGCCTTCATCCCCCCCAGCTTCCAGGGCCAACAATCCAGCCTCAAACTTGACCAACCCTCGGCT ACCCGTGGTCGAAACGCCATTCCCATCGTCAACCCGGCCACCGGCATCTCCATGTCCAGCCCACCGCCCTCTGTG TCGCCCGCCGCGATGCAGCAGTCGCTCGCCCGCCGATGGTAG
Gene	>Hirsu2\|4021 ATGGCTTCATACTACCATTACAATGCCCAGGCGGCACACGCGGCGCCCATTTCGCATAATAACCACCACGGCGGC GGGCGGAACCGCCGGGCGCCCCGCCTGTCCGTCTCACACAATCCGCAGAGGCAGTTCCGTGGCGCTCGCAGCCTC AAGGACCTCAACGAGTCGGCGGCCCTGTCCGCCTTCCGCGTCAAGTTTGAAGCAGGCCGCTCCTTTGAGCTTGAG GACGACCTCGAGTTCTGCCCCAACCTGTTGACAGACACCGACGTGAGTAGCTGCGAACCGGCCGAGCCCTCCCCT CTCGTCGTCGGCAACCCTTAGCATCTGACTTTTCAACCTCGGCAATAGCTGGTGTCCATGTCCAGTGCCTCGGAA CGTTCGTCACTGGCGAGCAACTCGCCCGAGTCGTCCCCTACGCAACAACCGCAAACCGTCGCGCCCGCCTTCTCC CTCAACTCGTCCTCTCCCGCCTTCATCCCCCCCAGCTTCCAGGGCCAACAATCCAGCCTCAAACTTGACCAACCC TCGGCTACCCGTGGTCGAAACGCCATTCCCATCGTCAACCCGGCCACCGGCATCTCCATGTCCAGCCCACCGCCC TCTGTGTCGCCCGCCGCGATGCAGCAGTCGCTCGCCCGCCGATGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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