Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4011
Gene name
LocationContig_2092:80..947
Strand-
Gene length (bp)867
Transcript length (bp)750
Coding sequence length (bp)750
Protein length (aa) 250

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13489 Methyltransf_23 Methyltransferase domain 2.6E-15 54 217
PF08241 Methyltransf_11 Methyltransferase domain 1.8E-13 61 171
PF13649 Methyltransf_25 Methyltransferase domain 2.3E-12 61 167
PF08242 Methyltransf_12 Methyltransferase domain 6.3E-11 61 169
PF13847 Methyltransf_31 Methyltransferase domain 3.1E-07 58 175
PF01209 Ubie_methyltran ubiE/COQ5 methyltransferase family 1.2E-05 54 175

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94628|YGE9_SCHPO Uncharacterized methyltransferase C1347.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1347.09 PE=3 SV=1 55 223 7.0E-15
sp|Q0HZP7|UBIE_SHESR Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Shewanella sp. (strain MR-7) GN=ubiE PE=3 SV=1 59 175 3.0E-07
sp|Q0HEA1|UBIE_SHESM Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Shewanella sp. (strain MR-4) GN=ubiE PE=3 SV=1 59 175 3.0E-07
sp|A0L1M4|UBIE_SHESA Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Shewanella sp. (strain ANA-3) GN=ubiE PE=3 SV=1 59 175 3.0E-07
sp|O31474|YCGJ_BACSU Uncharacterized methyltransferase YcgJ OS=Bacillus subtilis (strain 168) GN=ycgJ PE=1 SV=2 59 173 4.0E-07
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Swissprot ID Swissprot Description Start End E-value
sp|O94628|YGE9_SCHPO Uncharacterized methyltransferase C1347.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1347.09 PE=3 SV=1 55 223 7.0E-15
sp|Q0HZP7|UBIE_SHESR Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Shewanella sp. (strain MR-7) GN=ubiE PE=3 SV=1 59 175 3.0E-07
sp|Q0HEA1|UBIE_SHESM Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Shewanella sp. (strain MR-4) GN=ubiE PE=3 SV=1 59 175 3.0E-07
sp|A0L1M4|UBIE_SHESA Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Shewanella sp. (strain ANA-3) GN=ubiE PE=3 SV=1 59 175 3.0E-07
sp|O31474|YCGJ_BACSU Uncharacterized methyltransferase YcgJ OS=Bacillus subtilis (strain 168) GN=ycgJ PE=1 SV=2 59 173 4.0E-07
sp|Q8E9R7|UBIE_SHEON Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Shewanella oneidensis (strain MR-1) GN=ubiE PE=3 SV=1 59 175 5.0E-07
sp|Q5YPB0|MENG_NOCFA Demethylmenaquinone methyltransferase OS=Nocardia farcinica (strain IFM 10152) GN=menG PE=3 SV=1 59 189 5.0E-07
sp|A1SAJ8|UBIE_SHEAM Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=ubiE PE=3 SV=1 59 175 5.0E-07
sp|Q73SL8|MENG_MYCPA Demethylmenaquinone methyltransferase OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=menG PE=3 SV=2 59 229 6.0E-07
sp|Q088H8|UBIE_SHEFN Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Shewanella frigidimarina (strain NCIMB 400) GN=ubiE PE=3 SV=1 59 176 9.0E-07
sp|Q5QZ53|UBIG_IDILO Ubiquinone biosynthesis O-methyltransferase OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=ubiG PE=3 SV=1 53 170 1.0E-06
sp|Q9HUC0|UBIE_PSEAE Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=ubiE PE=3 SV=1 55 175 2.0E-06
sp|Q02EV4|UBIE_PSEAB Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ubiE PE=3 SV=1 55 175 2.0E-06
sp|B7V3F6|UBIE_PSEA8 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Pseudomonas aeruginosa (strain LESB58) GN=ubiE PE=3 SV=1 55 175 2.0E-06
sp|A6VDI6|UBIE_PSEA7 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Pseudomonas aeruginosa (strain PA7) GN=ubiE PE=3 SV=1 55 174 2.0E-06
sp|Q8PK00|UBIG_XANAC Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas axonopodis pv. citri (strain 306) GN=ubiG PE=3 SV=1 58 171 1.0E-05
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GO

GO Term Description Terminal node
GO:0008168 methyltransferase activity Yes
GO:0016740 transferase activity No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0016741 transferase activity, transferring one-carbon groups No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.7384 0.569 0.0528 0.0331 0.1181 0.0142 0.1019 0.0758 0.0587 0.005

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6624
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2237
Ophiocordyceps australis map64 (Brazil) OphauB2|714
Ophiocordyceps subramaniannii Hirsu2|4011 (this protein)
Ophiocordyceps subramaniannii Hirsu2|7170

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4011
MDHTFAHKNEEFWNSAAESVFKNEWIHHLQAQISSFLTGRADWLAVQPPKDHDGKTTARLLDYACGNGIVTRSLH
PVFSQCIGVDLAEGMLAQYRATAAEIGLSEAQARAVQGNLLAPNIEATATSPPLSEEQLSNFDMVAICMALHHVD
DIELATRRLAQRLRPGGVLLIIDWATRDGSASETTPLQYQPHPAAHTISHDSFTQDQILGLFQQAGCGDSRFVLA
DQLSDVPGALGGKMQLFFARASKL*
Coding >Hirsu2|4011
ATGGACCATACATTCGCACACAAGAACGAGGAGTTTTGGAACTCCGCCGCCGAGTCTGTCTTCAAGAACGAGTGG
ATCCATCATCTCCAGGCGCAGATCTCCAGCTTTTTGACAGGCCGTGCCGACTGGCTGGCCGTGCAGCCGCCCAAA
GACCACGACGGAAAAACGACGGCAAGGCTATTGGATTACGCTTGCGGCAATGGCATCGTGACGCGTTCACTTCAC
CCTGTCTTTAGTCAGTGCATCGGCGTCGACCTTGCCGAGGGCATGCTAGCCCAGTATCGGGCCACGGCCGCCGAG
ATCGGCCTGTCCGAGGCGCAGGCCAGGGCAGTCCAAGGCAACCTCCTAGCGCCCAATATTGAAGCTACAGCTACT
AGTCCTCCACTGAGCGAGGAGCAGCTCAGCAACTTCGATATGGTCGCAATCTGCATGGCACTTCATCACGTCGAC
GACATTGAACTGGCCACGAGGCGGCTTGCACAGAGATTGCGGCCTGGGGGCGTGCTCCTCATCATCGATTGGGCC
ACAAGGGACGGGTCGGCGAGCGAGACAACCCCTCTTCAATACCAACCGCATCCTGCGGCGCACACAATTTCACAT
GATAGCTTCACCCAAGACCAGATATTGGGACTTTTCCAACAGGCCGGCTGTGGTGACTCGAGGTTTGTCTTGGCT
GATCAACTTTCCGACGTGCCCGGTGCCCTTGGTGGCAAAATGCAGTTGTTTTTCGCCCGTGCATCCAAGCTTTAG
Transcript >Hirsu2|4011
ATGGACCATACATTCGCACACAAGAACGAGGAGTTTTGGAACTCCGCCGCCGAGTCTGTCTTCAAGAACGAGTGG
ATCCATCATCTCCAGGCGCAGATCTCCAGCTTTTTGACAGGCCGTGCCGACTGGCTGGCCGTGCAGCCGCCCAAA
GACCACGACGGAAAAACGACGGCAAGGCTATTGGATTACGCTTGCGGCAATGGCATCGTGACGCGTTCACTTCAC
CCTGTCTTTAGTCAGTGCATCGGCGTCGACCTTGCCGAGGGCATGCTAGCCCAGTATCGGGCCACGGCCGCCGAG
ATCGGCCTGTCCGAGGCGCAGGCCAGGGCAGTCCAAGGCAACCTCCTAGCGCCCAATATTGAAGCTACAGCTACT
AGTCCTCCACTGAGCGAGGAGCAGCTCAGCAACTTCGATATGGTCGCAATCTGCATGGCACTTCATCACGTCGAC
GACATTGAACTGGCCACGAGGCGGCTTGCACAGAGATTGCGGCCTGGGGGCGTGCTCCTCATCATCGATTGGGCC
ACAAGGGACGGGTCGGCGAGCGAGACAACCCCTCTTCAATACCAACCGCATCCTGCGGCGCACACAATTTCACAT
GATAGCTTCACCCAAGACCAGATATTGGGACTTTTCCAACAGGCCGGCTGTGGTGACTCGAGGTTTGTCTTGGCT
GATCAACTTTCCGACGTGCCCGGTGCCCTTGGTGGCAAAATGCAGTTGTTTTTCGCCCGTGCATCCAAGCTTTAG
Gene >Hirsu2|4011
ATGGACCATACATTCGCACACAAGAACGAGGAGTTTTGGAAGTGAGTAACAATGCACGCTCTCCTTACCGCATCT
CCCGTCTCACAAGTCCCCGCACAGCTCCGCCGCCGAGTCTGTCTTCAAGAACGAGTGGATCCATCATCTCCAGGC
GCAGATCTCCAGCTTTTTGACAGGCCGTGCCGACTGGCTGGCCGTGCAGCCGCCCAAAGACCACGACGGAAAAAC
GACGGCAAGGCTATTGGATTACGCTTGCGGCAATGGCATCGTGACGCGTGTACGCAAAAGCCAACCACTAAAACT
CCTACACGGTTCCCGCTGACGGAGCTTATGTAGTCACTTCACCCTGTCTTTAGTCAGTGCATCGGCGTCGACCTT
GCCGAGGGCATGCTAGCCCAGTATCGGGCCACGGCCGCCGAGATCGGCCTGTCCGAGGCGCAGGCCAGGGCAGTC
CAAGGCAACCTCCTAGCGCCCAATATTGAAGCTACAGCTACTAGTCCTCCACTGAGCGAGGAGCAGCTCAGCAAC
TTCGATATGGTCGCAATCTGCATGGCACTTCATCACGTCGACGACATTGAACTGGCCACGAGGCGGCTTGCACAG
AGATTGCGGCCTGGGGGCGTGCTCCTCATCATCGATTGGGCCACAAGGGACGGGTCGGCGAGCGAGACAACCCCT
CTTCAATACCAACCGCATCCTGCGGCGCACACAATTTCACATGATAGCTTCACCCAAGACCAGATATTGGGACTT
TTCCAACAGGCCGGCTGTGGTGACTCGAGGTTTGTCTTGGCTGATCAACTTTCCGACGTGCCCGGTGCCCTTGGT
GGCAAAATGCAGTTGTTTTTCGCCCGTGCATCCAAGCTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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