Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|401
Gene name
LocationContig_1079:6794..8341
Strand-
Gene length (bp)1547
Transcript length (bp)1380
Coding sequence length (bp)1380
Protein length (aa) 460

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1424 0.0881 0.9505 0.1 0.0754 0.0386 0.1359 0.1564 0.1762 0.0104

SignalP

SignalP signal predicted Location Score
Yes 1 - 27 0.76927

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7021
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7447
Ophiocordyceps australis map64 (Brazil) OphauB2|6320
Ophiocordyceps subramaniannii Hirsu2|401 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|401
MRPVKLCLLSASLGLGAFIPLRPGTGADETKEKASLSRGDSVAHPPKMHPLSARQAPDGAPNWSGKIPPISDQEF
CTLSRAMGWVAYGLMNETRALSPVTTQGKPKYDYPGYGTQVVMNSDPKVVIIGKMLQVWEKLMVSFERQLKWTPT
MKNQMRCSACYVEYCKSATDWLVMMRRRAPSYSYDNEVVVIFLRRLKGLVEAHQKVSKFLVDGPWSPINQEIPAV
DETGWSLRLQHFYNVLPKQSLKSFIHDADPVTRYPGGGAFKEAIEAWERGDGKHLKKYKSQKRSLNANQVTGPPV
RESQLNLINNLLLKVKLFAQAHQPYAAPVAKADGAEESSQEKGQQGNPNREEGKGDKATDKKKVEGSTAESKKAD
VGDGKPKPAAVVDSEKHGPGAEAEEKRVGGSPSGLESKSAGKAIRRRGLIPGGRASAKGWGYLVEGDLTAGQDYR
RAGHILKGE*
Coding >Hirsu2|401
ATGAGGCCCGTCAAGCTCTGCCTCCTGTCGGCCTCGCTCGGCCTCGGGGCCTTCATCCCGCTGCGGCCGGGGACG
GGCGCCGACGAGACCAAGGAGAAGGCTTCACTGTCCAGAGGTGACAGCGTGGCACACCCGCCGAAGATGCACCCC
CTGAGCGCTCGCCAGGCACCGGATGGAGCCCCGAACTGGAGCGGCAAGATACCGCCCATCAGCGATCAGGAATTC
TGCACCCTCTCTCGGGCCATGGGATGGGTCGCCTACGGGCTGATGAACGAGACGAGGGCCTTGAGCCCGGTGACT
ACCCAGGGCAAGCCCAAGTACGATTATCCAGGGTACGGCACCCAGGTGGTCATGAACAGCGATCCAAAAGTGGTT
ATCATCGGCAAGATGTTGCAGGTATGGGAGAAGCTGATGGTGAGCTTCGAACGCCAACTCAAGTGGACTCCGACC
ATGAAGAATCAGATGCGCTGCTCAGCCTGCTACGTCGAGTACTGCAAAAGCGCCACCGATTGGCTTGTCATGATG
CGCAGGAGGGCGCCAAGCTACAGCTATGACAATGAAGTCGTCGTCATCTTCCTCCGACGCCTGAAAGGCCTCGTC
GAAGCACATCAGAAAGTGTCCAAATTCCTAGTCGATGGGCCCTGGTCTCCCATCAACCAGGAAATCCCGGCCGTT
GACGAGACTGGATGGAGCCTGAGGCTCCAGCACTTTTACAATGTGCTGCCGAAGCAGTCGCTCAAGTCCTTCATC
CATGATGCCGATCCTGTGACCAGATATCCGGGCGGAGGCGCCTTCAAAGAAGCCATCGAGGCCTGGGAACGAGGC
GACGGCAAACACCTCAAGAAGTATAAATCCCAGAAGCGATCGCTGAATGCGAACCAGGTGACGGGACCGCCCGTG
CGTGAAAGCCAACTGAACCTGATAAACAACCTGCTGTTGAAGGTCAAGCTTTTCGCCCAGGCCCACCAGCCGTAC
GCCGCACCCGTGGCGAAAGCTGACGGGGCCGAGGAGAGTAGCCAGGAGAAAGGTCAGCAGGGAAACCCCAACAGG
GAGGAGGGCAAGGGTGACAAGGCAACGGATAAGAAGAAGGTAGAGGGCTCGACGGCAGAGAGCAAGAAGGCGGAC
GTCGGCGACGGCAAGCCCAAGCCCGCGGCTGTCGTCGACTCCGAAAAGCACGGACCCGGGGCCGAAGCCGAGGAG
AAGCGCGTCGGCGGTTCGCCGTCTGGCCTCGAAAGCAAGTCTGCCGGCAAGGCCATCCGACGCAGAGGACTAATC
CCCGGCGGAAGGGCTTCTGCAAAGGGTTGGGGGTACTTGGTCGAGGGCGACCTGACCGCCGGTCAGGATTACCGG
AGAGCAGGACATATTTTGAAAGGGGAGTGA
Transcript >Hirsu2|401
ATGAGGCCCGTCAAGCTCTGCCTCCTGTCGGCCTCGCTCGGCCTCGGGGCCTTCATCCCGCTGCGGCCGGGGACG
GGCGCCGACGAGACCAAGGAGAAGGCTTCACTGTCCAGAGGTGACAGCGTGGCACACCCGCCGAAGATGCACCCC
CTGAGCGCTCGCCAGGCACCGGATGGAGCCCCGAACTGGAGCGGCAAGATACCGCCCATCAGCGATCAGGAATTC
TGCACCCTCTCTCGGGCCATGGGATGGGTCGCCTACGGGCTGATGAACGAGACGAGGGCCTTGAGCCCGGTGACT
ACCCAGGGCAAGCCCAAGTACGATTATCCAGGGTACGGCACCCAGGTGGTCATGAACAGCGATCCAAAAGTGGTT
ATCATCGGCAAGATGTTGCAGGTATGGGAGAAGCTGATGGTGAGCTTCGAACGCCAACTCAAGTGGACTCCGACC
ATGAAGAATCAGATGCGCTGCTCAGCCTGCTACGTCGAGTACTGCAAAAGCGCCACCGATTGGCTTGTCATGATG
CGCAGGAGGGCGCCAAGCTACAGCTATGACAATGAAGTCGTCGTCATCTTCCTCCGACGCCTGAAAGGCCTCGTC
GAAGCACATCAGAAAGTGTCCAAATTCCTAGTCGATGGGCCCTGGTCTCCCATCAACCAGGAAATCCCGGCCGTT
GACGAGACTGGATGGAGCCTGAGGCTCCAGCACTTTTACAATGTGCTGCCGAAGCAGTCGCTCAAGTCCTTCATC
CATGATGCCGATCCTGTGACCAGATATCCGGGCGGAGGCGCCTTCAAAGAAGCCATCGAGGCCTGGGAACGAGGC
GACGGCAAACACCTCAAGAAGTATAAATCCCAGAAGCGATCGCTGAATGCGAACCAGGTGACGGGACCGCCCGTG
CGTGAAAGCCAACTGAACCTGATAAACAACCTGCTGTTGAAGGTCAAGCTTTTCGCCCAGGCCCACCAGCCGTAC
GCCGCACCCGTGGCGAAAGCTGACGGGGCCGAGGAGAGTAGCCAGGAGAAAGGTCAGCAGGGAAACCCCAACAGG
GAGGAGGGCAAGGGTGACAAGGCAACGGATAAGAAGAAGGTAGAGGGCTCGACGGCAGAGAGCAAGAAGGCGGAC
GTCGGCGACGGCAAGCCCAAGCCCGCGGCTGTCGTCGACTCCGAAAAGCACGGACCCGGGGCCGAAGCCGAGGAG
AAGCGCGTCGGCGGTTCGCCGTCTGGCCTCGAAAGCAAGTCTGCCGGCAAGGCCATCCGACGCAGAGGACTAATC
CCCGGCGGAAGGGCTTCTGCAAAGGGTTGGGGGTACTTGGTCGAGGGCGACCTGACCGCCGGTCAGGATTACCGG
AGAGCAGGACATATTTTGAAAGGGGAGTGA
Gene >Hirsu2|401
ATGAGGCCCGTCAAGCTCTGCCTCCTGTCGGCCTCGCTCGGCCTCGGGGCCTTCATCCCGCTGCGGCCGGGGACG
GGCGCCGACGAGACCAAGGAGAAGGCTTCACTGTCCAGAGGTGACAGCGTGGCACACCCGCCGAAGATGCACCCC
CTGAGCGCTCGCCAGGCACCGGATGGAGCCCCGAACTGGAGCGGCAAGATACCGCCCATCAGCGATCAGGAATTC
TGCACCCTCTCTCGGGCCATGGGATGGGTCGCCTACGGGCTGATGAACGAGACGAGGGCCTTGAGCCCGGTGACT
ACCCAGGGCAAGCCCAAGTACGATTATCCAGGGTACGGCACCCAGGTGGTCATGAACAGCGATCCAAAAGTGGTT
GTAAGTCGTCGAACTCACTCCTTTTCTTTCCTTCCTTTTTGCTGACACCGGGCTCTTTCCAGATCATCGGCAAGA
TGTTGCAGGTATGGGAGAAGCTGATGGTGAGCTTCGAACGCCAACTCAAGTGGACTCCGACCATGAAGAATCAGA
TGCGCTGCTCAGCCTGCTACGTCGAGGTCAGTGATGAGAAGGCCTTCCCTCGCTCGGCCGGGCTGACTTTTGTTG
CTGCAGTACTGCAAAAGCGCCACCGATTGGCTTGTCATGATGCGCAGGAGGGCGCCAAGCTACAGCTATGACAAT
GAAGTCGTCGTCATCTTCCTCCGACGCCTGAAAGGCCTCGTCGAAGCACATCAGGTACGCCTCGCCGGGTGGACT
GTTCAGTCGTCGGCTGACCGGAACGCCAGAAAGTGTCCAAATTCCTAGTCGATGGGCCCTGGTCTCCCATCAACC
AGGAAATCCCGGCCGTTGACGAGACTGGATGGAGCCTGAGGCTCCAGCACTTTTACAATGTGCTGCCGAAGCAGT
CGCTCAAGTCCTTCATCCATGATGCCGATCCTGTGACCAGATATCCGGGCGGAGGCGCCTTCAAAGAAGCCATCG
AGGCCTGGGAACGAGGCGACGGCAAACACCTCAAGAAGTATAAATCCCAGAAGCGATCGCTGAATGCGAACCAGG
TGACGGGACCGCCCGTGCGTGAAAGCCAACTGAACCTGATAAACAACCTGCTGTTGAAGGTCAAGCTTTTCGCCC
AGGCCCACCAGCCGTACGCCGCACCCGTGGCGAAAGCTGACGGGGCCGAGGAGAGTAGCCAGGAGAAAGGTCAGC
AGGGAAACCCCAACAGGGAGGAGGGCAAGGGTGACAAGGCAACGGATAAGAAGAAGGTAGAGGGCTCGACGGCAG
AGAGCAAGAAGGCGGACGTCGGCGACGGCAAGCCCAAGCCCGCGGCTGTCGTCGACTCCGAAAAGCACGGACCCG
GGGCCGAAGCCGAGGAGAAGCGCGTCGGCGGTTCGCCGTCTGGCCTCGAAAGCAAGTCTGCCGGCAAGGCCATCC
GACGCAGAGGACTAATCCCCGGCGGAAGGGCTTCTGCAAAGGGTTGGGGGTACTTGGTCGAGGGCGACCTGACCG
CCGGTCAGGATTACCGGAGAGCAGGACATATTTTGAAAGGGGAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail