Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|3977
Gene name
Location	Contig_208:11795..13046
Strand	+
Gene length (bp)	1251
Transcript length (bp)	1251
Coding sequence length (bp)	1251
Protein length (aa)	417

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04666	Glyco_transf_54	N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region	4.0E-08	65	119

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q812F8\|MGT4B_MOUSE	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Mus musculus GN=Mgat4b PE=2 SV=1	73	237	2.0E-10
sp\|Q9UQ53\|MGT4B_HUMAN	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Homo sapiens GN=MGAT4B PE=1 SV=1	73	237	2.0E-09
sp\|Q6GMK0\|MGT4B_DANRE	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Danio rerio GN=mgat4b PE=2 SV=1	73	220	3.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 26	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	7	26	19
2	250	272	22
3	293	315	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|3977 MRPSRANAVFWLAWLCLALWCYLDTYDDPSSIFYDPARAYRPRFSFARTTEVDRFLHQTASAAPQSRAQEPLLCV GIPSVNRSTESFVQHTVGSLVDTLSPAERELVYIVVLLADSSPQSHFAYGKDWLGRLPDEVLVYTEHGGPASGGN TTAAAKNYHAIPYHVRGEPRSKERVENMRLDHSVLVEHCRLRGTPYFALIEDDVVASRNWFARLRTALQHVERRA TRTGRDWIYLRLFYSELLMGWNAEEWLSYAEVVFGAYAVLLLVLLELRRRHWLGGPAGAGPSKGAGQNYACALVL CLWTPATIALFFVAGRVSLHRLSPFPLSGVREMPNYGCCAQGLVFPRRHLAGLQDLLRNPPFAFAGDQILEDYAR DHGLAKWALDPSVLQHAGRRQSSDGPRTADVWNFSFERQRA*
Coding	>Hirsu2\|3977 ATGCGCCCCTCGCGCGCCAACGCCGTCTTCTGGCTGGCCTGGCTGTGCCTGGCTCTGTGGTGCTACCTCGACACC TACGACGACCCTTCCTCCATCTTCTACGACCCGGCCAGGGCCTACCGGCCGCGCTTCTCCTTCGCCCGCACCACC GAGGTCGATCGCTTCCTGCACCAGACGGCCTCGGCCGCTCCCCAGTCGCGAGCCCAAGAGCCCCTCCTGTGCGTC GGCATCCCCAGCGTCAACCGCAGCACCGAGTCCTTCGTCCAGCACACCGTCGGCAGCCTCGTCGACACCCTGTCG CCCGCCGAGCGCGAGCTCGTCTACATCGTCGTCCTGCTGGCCGACAGCTCGCCCCAGTCGCACTTCGCCTACGGC AAGGACTGGCTCGGCCGCCTGCCCGACGAGGTGCTCGTCTACACCGAACACGGCGGCCCCGCCTCTGGCGGCAAC ACGACCGCCGCGGCGAAAAACTATCATGCCATCCCCTACCACGTCCGCGGCGAACCGCGCAGCAAGGAACGTGTC GAGAACATGCGCCTCGACCATTCGGTGCTGGTGGAGCACTGCCGCCTCCGCGGCACTCCCTACTTCGCCCTCATC GAGGACGACGTCGTCGCCTCGCGCAACTGGTTCGCGCGCCTCCGCACAGCCCTGCAGCACGTGGAGCGGCGCGCG ACGCGCACCGGCCGCGACTGGATCTACCTGCGCCTTTTCTACTCGGAGCTGCTCATGGGCTGGAACGCCGAGGAG TGGCTGAGCTACGCCGAGGTCGTCTTCGGCGCCTACGCCGTCCTGCTGCTGGTCCTACTCGAGCTGCGCCGCCGG CACTGGCTCGGCGGCCCGGCCGGCGCCGGGCCTTCCAAGGGCGCCGGGCAGAACTACGCCTGCGCCCTGGTGCTG TGCCTCTGGACGCCCGCCACCATCGCCCTCTTCTTCGTGGCCGGGCGCGTCTCGCTGCACCGGCTGAGCCCGTTC CCGCTGAGCGGCGTGCGCGAGATGCCCAACTACGGCTGCTGCGCCCAGGGGCTCGTCTTCCCGCGCCGCCACCTG GCCGGCCTGCAGGACCTGCTGCGCAACCCGCCCTTCGCCTTCGCCGGCGACCAGATCCTCGAGGACTACGCCCGC GACCACGGCCTGGCCAAATGGGCCCTCGACCCGAGCGTCCTGCAGCATGCCGGCCGCCGCCAGTCGTCGGATGGG CCGCGCACCGCCGACGTGTGGAACTTTAGCTTCGAGAGGCAGCGGGCCTGA
Transcript	>Hirsu2\|3977 ATGCGCCCCTCGCGCGCCAACGCCGTCTTCTGGCTGGCCTGGCTGTGCCTGGCTCTGTGGTGCTACCTCGACACC TACGACGACCCTTCCTCCATCTTCTACGACCCGGCCAGGGCCTACCGGCCGCGCTTCTCCTTCGCCCGCACCACC GAGGTCGATCGCTTCCTGCACCAGACGGCCTCGGCCGCTCCCCAGTCGCGAGCCCAAGAGCCCCTCCTGTGCGTC GGCATCCCCAGCGTCAACCGCAGCACCGAGTCCTTCGTCCAGCACACCGTCGGCAGCCTCGTCGACACCCTGTCG CCCGCCGAGCGCGAGCTCGTCTACATCGTCGTCCTGCTGGCCGACAGCTCGCCCCAGTCGCACTTCGCCTACGGC AAGGACTGGCTCGGCCGCCTGCCCGACGAGGTGCTCGTCTACACCGAACACGGCGGCCCCGCCTCTGGCGGCAAC ACGACCGCCGCGGCGAAAAACTATCATGCCATCCCCTACCACGTCCGCGGCGAACCGCGCAGCAAGGAACGTGTC GAGAACATGCGCCTCGACCATTCGGTGCTGGTGGAGCACTGCCGCCTCCGCGGCACTCCCTACTTCGCCCTCATC GAGGACGACGTCGTCGCCTCGCGCAACTGGTTCGCGCGCCTCCGCACAGCCCTGCAGCACGTGGAGCGGCGCGCG ACGCGCACCGGCCGCGACTGGATCTACCTGCGCCTTTTCTACTCGGAGCTGCTCATGGGCTGGAACGCCGAGGAG TGGCTGAGCTACGCCGAGGTCGTCTTCGGCGCCTACGCCGTCCTGCTGCTGGTCCTACTCGAGCTGCGCCGCCGG CACTGGCTCGGCGGCCCGGCCGGCGCCGGGCCTTCCAAGGGCGCCGGGCAGAACTACGCCTGCGCCCTGGTGCTG TGCCTCTGGACGCCCGCCACCATCGCCCTCTTCTTCGTGGCCGGGCGCGTCTCGCTGCACCGGCTGAGCCCGTTC CCGCTGAGCGGCGTGCGCGAGATGCCCAACTACGGCTGCTGCGCCCAGGGGCTCGTCTTCCCGCGCCGCCACCTG GCCGGCCTGCAGGACCTGCTGCGCAACCCGCCCTTCGCCTTCGCCGGCGACCAGATCCTCGAGGACTACGCCCGC GACCACGGCCTGGCCAAATGGGCCCTCGACCCGAGCGTCCTGCAGCATGCCGGCCGCCGCCAGTCGTCGGATGGG CCGCGCACCGCCGACGTGTGGAACTTTAGCTTCGAGAGGCAGCGGGCCTGA
Gene	>Hirsu2\|3977 ATGCGCCCCTCGCGCGCCAACGCCGTCTTCTGGCTGGCCTGGCTGTGCCTGGCTCTGTGGTGCTACCTCGACACC TACGACGACCCTTCCTCCATCTTCTACGACCCGGCCAGGGCCTACCGGCCGCGCTTCTCCTTCGCCCGCACCACC GAGGTCGATCGCTTCCTGCACCAGACGGCCTCGGCCGCTCCCCAGTCGCGAGCCCAAGAGCCCCTCCTGTGCGTC GGCATCCCCAGCGTCAACCGCAGCACCGAGTCCTTCGTCCAGCACACCGTCGGCAGCCTCGTCGACACCCTGTCG CCCGCCGAGCGCGAGCTCGTCTACATCGTCGTCCTGCTGGCCGACAGCTCGCCCCAGTCGCACTTCGCCTACGGC AAGGACTGGCTCGGCCGCCTGCCCGACGAGGTGCTCGTCTACACCGAACACGGCGGCCCCGCCTCTGGCGGCAAC ACGACCGCCGCGGCGAAAAACTATCATGCCATCCCCTACCACGTCCGCGGCGAACCGCGCAGCAAGGAACGTGTC GAGAACATGCGCCTCGACCATTCGGTGCTGGTGGAGCACTGCCGCCTCCGCGGCACTCCCTACTTCGCCCTCATC GAGGACGACGTCGTCGCCTCGCGCAACTGGTTCGCGCGCCTCCGCACAGCCCTGCAGCACGTGGAGCGGCGCGCG ACGCGCACCGGCCGCGACTGGATCTACCTGCGCCTTTTCTACTCGGAGCTGCTCATGGGCTGGAACGCCGAGGAG TGGCTGAGCTACGCCGAGGTCGTCTTCGGCGCCTACGCCGTCCTGCTGCTGGTCCTACTCGAGCTGCGCCGCCGG CACTGGCTCGGCGGCCCGGCCGGCGCCGGGCCTTCCAAGGGCGCCGGGCAGAACTACGCCTGCGCCCTGGTGCTG TGCCTCTGGACGCCCGCCACCATCGCCCTCTTCTTCGTGGCCGGGCGCGTCTCGCTGCACCGGCTGAGCCCGTTC CCGCTGAGCGGCGTGCGCGAGATGCCCAACTACGGCTGCTGCGCCCAGGGGCTCGTCTTCCCGCGCCGCCACCTG GCCGGCCTGCAGGACCTGCTGCGCAACCCGCCCTTCGCCTTCGCCGGCGACCAGATCCTCGAGGACTACGCCCGC GACCACGGCCTGGCCAAATGGGCCCTCGACCCGAGCGTCCTGCAGCATGCCGGCCGCCGCCAGTCGTCGGATGGG CCGCGCACCGCCGACGTGTGGAACTTTAGCTTCGAGAGGCAGCGGGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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