Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3961
Gene name
LocationContig_2074:2078..2401
Strand+
Gene length (bp)323
Transcript length (bp)270
Coding sequence length (bp)270
Protein length (aa) 90

Overview

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PFAM Domains

(None)

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q5J6J2|SCPB_TRIRU Carboxypeptidase S1 homolog B OS=Trichophyton rubrum GN=SCPB PE=1 SV=1 5 83 4.0E-19
sp|C5FGX1|SCPB_ARTOC Carboxypeptidase S1 homolog B OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) GN=SCPB PE=3 SV=1 21 83 4.0E-19
sp|D4AP52|SCPB_ARTBC Carboxypeptidase S1 homolog B OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=SCPB PE=3 SV=1 5 83 4.0E-19
sp|B6V867|SCPA_TRITO Carboxypeptidase S1 homolog A OS=Trichophyton tonsurans GN=SCPA PE=3 SV=1 2 83 4.0E-18
sp|A7UKV5|SPCA_TRIEQ Carboxypeptidase S1 homolog A OS=Trichophyton equinum GN=SCPA PE=3 SV=1 2 83 4.0E-18
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q5J6J2|SCPB_TRIRU Carboxypeptidase S1 homolog B OS=Trichophyton rubrum GN=SCPB PE=1 SV=1 5 83 4.0E-19
sp|C5FGX1|SCPB_ARTOC Carboxypeptidase S1 homolog B OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) GN=SCPB PE=3 SV=1 21 83 4.0E-19
sp|D4AP52|SCPB_ARTBC Carboxypeptidase S1 homolog B OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=SCPB PE=3 SV=1 5 83 4.0E-19
sp|B6V867|SCPA_TRITO Carboxypeptidase S1 homolog A OS=Trichophyton tonsurans GN=SCPA PE=3 SV=1 2 83 4.0E-18
sp|A7UKV5|SPCA_TRIEQ Carboxypeptidase S1 homolog A OS=Trichophyton equinum GN=SCPA PE=3 SV=1 2 83 4.0E-18
sp|C5FW30|SPCA_ARTOC Carboxypeptidase S1 homolog A OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) GN=SCPA PE=3 SV=1 3 83 1.0E-17
sp|Q5J6J1|SPCA_TRIRU Carboxypeptidase S1 homolog A OS=Trichophyton rubrum GN=SCPA PE=1 SV=1 2 83 4.0E-17
sp|D4DD24|SCPA_TRIVH Carboxypeptidase S1 homolog A OS=Trichophyton verrucosum (strain HKI 0517) GN=SCPA PE=3 SV=1 2 83 1.0E-16
sp|D4AIF1|SCPA_ARTBC Carboxypeptidase S1 homolog A OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=SCPA PE=3 SV=1 2 83 2.0E-16
sp|D4AQ54|SCPC_ARTBC Carboxypeptidase Y homolog ARB_06361 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_06361 PE=1 SV=1 4 82 6.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1904 0.0907 0.7511 0.3033 0.2038 0.0805 0.3473 0.3603 0.1809 0.0049

SignalP

SignalP signal predicted Location Score
Yes 1 - 15 0.999284

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9478
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|3961 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3961
MLGLALLWTAAAAAAGPRFPFPPVPEGLTVLRSKFHENVTISFKEPGICETTPGVRSFAGHIHLPPGLLDDDDGG
PQDYPVNTCVITSP*
Coding >Hirsu2|3961
ATGCTGGGCCTGGCGCTGCTCTGGACGGCCGCTGCCGCTGCCGCCGGCCCTCGGTTCCCCTTCCCGCCTGTGCCC
GAGGGCCTGACGGTCCTGAGGTCCAAGTTTCACGAGAACGTCACCATTTCCTTCAAAGAGCCCGGCATCTGCGAG
ACCACGCCCGGCGTCCGCTCCTTCGCCGGCCACATCCACCTGCCTCCGGGCCTCCTCGACGATGACGATGGCGGG
CCTCAAGACTACCCCGTCAACACGTGCGTCATCACCTCTCCCTGA
Transcript >Hirsu2|3961
ATGCTGGGCCTGGCGCTGCTCTGGACGGCCGCTGCCGCTGCCGCCGGCCCTCGGTTCCCCTTCCCGCCTGTGCCC
GAGGGCCTGACGGTCCTGAGGTCCAAGTTTCACGAGAACGTCACCATTTCCTTCAAAGAGCCCGGCATCTGCGAG
ACCACGCCCGGCGTCCGCTCCTTCGCCGGCCACATCCACCTGCCTCCGGGCCTCCTCGACGATGACGATGGCGGG
CCTCAAGACTACCCCGTCAACACGTGCGTCATCACCTCTCCCTGA
Gene >Hirsu2|3961
ATGCTGGGCCTGGCGCTGCTCTGGACGGCCGCTGCCGCTGCCGCCGGCCCTCGGTTCCCCTTCCCGCCTGTGCCC
GAGGGCCTGACGGTCCTGAGGTCCAAGTTTCACGAGAACGTCACCATTTCCTTCAAAGAGGTCCGTCGCCTCCCC
GCTGGGTCCTGAAGGCCACGAGCCCTGACGGCCGGCAGCCCGGCATCTGCGAGACCACGCCCGGCGTCCGCTCCT
TCGCCGGCCACATCCACCTGCCTCCGGGCCTCCTCGACGATGACGATGGCGGGCCTCAAGACTACCCCGTCAACA
CGTGCGTCATCACCTCTCCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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