Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3957
Gene name
LocationContig_2070:552..1701
Strand-
Gene length (bp)1149
Transcript length (bp)1149
Coding sequence length (bp)1149
Protein length (aa) 383

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1782 0.0622 0.9252 0.1625 0.0897 0.0617 0.1417 0.346 0.1836 0.007

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.999734

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup95
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7668
Ophiocordyceps australis map64 (Brazil) OphauB2|1775
Ophiocordyceps australis map64 (Brazil) OphauB2|2378
Ophiocordyceps australis map64 (Brazil) OphauB2|2448
Ophiocordyceps camponoti-floridani Ophcf2|05525
Ophiocordyceps camponoti-rufipedis Ophun1|3785
Ophiocordyceps camponoti-rufipedis Ophun1|5895
Ophiocordyceps camponoti-rufipedis Ophun1|965
Ophiocordyceps kimflemingae Ophio5|1588
Ophiocordyceps kimflemingae Ophio5|1780
Ophiocordyceps kimflemingae Ophio5|2993
Ophiocordyceps subramaniannii Hirsu2|10161
Ophiocordyceps subramaniannii Hirsu2|3957 (this protein)
Ophiocordyceps subramaniannii Hirsu2|9552

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3957
MLLNTLVPLLLAASVLGNMPVDPEAVAKNFTDSLLAKTTLDWKQPPHFDQQVTEPTCANLIFQCLHATFRLRQTL
LPSSKPKLSVDFDRVSQRRFLNLNNEQVVLSTDESVWTSEGSSNGWRVGAALSGKSISVSSDVSFSTHASTTRIQ
SLGITETCPGGHECHFETWVYHTNWAGNCRRSATIDCGGEMDVCRKVRRDPAVVSARTRGFMGIPSRETGKIYRP
HDLDCPQLYDWSWRQCWASDGPRYGRRERACRVRAPIMEAGSGGRPLFTTVFVKEDHRSERPEAAVRMGAACIVQ
LQSGRWYDAEDDTFYDEASGGWLPRGGAVPLPAIAESLRRPNCSTATGSNNRAARRAVAGRRRAEVTVVAGFRGF
GSGVTMA*
Coding >Hirsu2|3957
ATGCTGCTCAACACACTAGTTCCCCTTCTCTTGGCAGCGTCGGTCCTGGGCAACATGCCCGTCGATCCCGAAGCG
GTGGCCAAGAACTTCACCGACTCGCTGCTGGCAAAGACGACACTCGACTGGAAGCAGCCGCCGCACTTCGACCAG
CAAGTGACGGAGCCGACGTGTGCCAATCTCATCTTCCAATGCCTGCATGCGACATTCCGGCTGCGGCAGACGTTG
CTGCCGTCGTCCAAGCCCAAACTCAGCGTCGACTTTGACCGGGTTTCGCAGCGGCGCTTCCTCAACCTCAACAAC
GAGCAGGTGGTGCTGAGCACGGACGAGTCGGTGTGGACGTCGGAGGGTTCCAGCAACGGCTGGCGGGTCGGGGCG
GCGCTGTCGGGCAAGTCGATCTCGGTGTCGTCGGACGTGTCGTTCTCGACTCACGCGTCGACGACGAGGATCCAG
TCGCTGGGCATCACGGAGACGTGCCCCGGCGGACACGAGTGCCACTTCGAGACGTGGGTGTACCACACGAACTGG
GCCGGCAACTGCCGGCGGAGCGCGACCATCGACTGCGGCGGCGAGATGGACGTCTGCCGCAAGGTGAGGCGTGAC
CCGGCGGTGGTGTCGGCGCGGACGCGGGGGTTCATGGGCATACCGTCGCGCGAGACGGGCAAGATCTACCGGCCC
CACGACCTCGACTGCCCGCAGCTGTACGACTGGAGCTGGCGGCAGTGCTGGGCGAGCGACGGGCCGCGGTACGGG
CGGCGCGAGCGGGCGTGCCGGGTGCGGGCGCCCATCATGGAGGCCGGGTCGGGCGGCCGGCCGCTCTTCACCACC
GTCTTCGTCAAGGAGGACCACCGGAGCGAGCGGCCCGAGGCGGCGGTGCGGATGGGCGCCGCGTGCATCGTGCAG
CTGCAGTCGGGCCGGTGGTACGACGCCGAGGACGACACCTTCTACGACGAGGCCTCGGGCGGCTGGCTCCCGAGG
GGCGGGGCGGTGCCGCTGCCGGCGATCGCGGAGAGCCTCCGGCGGCCCAACTGCTCGACGGCAACGGGGAGCAAC
AACAGGGCGGCGAGGAGGGCGGTGGCCGGGCGGCGGCGCGCCGAGGTCACGGTGGTTGCGGGATTCCGGGGCTTT
GGGAGCGGAGTGACGATGGCGTAG
Transcript >Hirsu2|3957
ATGCTGCTCAACACACTAGTTCCCCTTCTCTTGGCAGCGTCGGTCCTGGGCAACATGCCCGTCGATCCCGAAGCG
GTGGCCAAGAACTTCACCGACTCGCTGCTGGCAAAGACGACACTCGACTGGAAGCAGCCGCCGCACTTCGACCAG
CAAGTGACGGAGCCGACGTGTGCCAATCTCATCTTCCAATGCCTGCATGCGACATTCCGGCTGCGGCAGACGTTG
CTGCCGTCGTCCAAGCCCAAACTCAGCGTCGACTTTGACCGGGTTTCGCAGCGGCGCTTCCTCAACCTCAACAAC
GAGCAGGTGGTGCTGAGCACGGACGAGTCGGTGTGGACGTCGGAGGGTTCCAGCAACGGCTGGCGGGTCGGGGCG
GCGCTGTCGGGCAAGTCGATCTCGGTGTCGTCGGACGTGTCGTTCTCGACTCACGCGTCGACGACGAGGATCCAG
TCGCTGGGCATCACGGAGACGTGCCCCGGCGGACACGAGTGCCACTTCGAGACGTGGGTGTACCACACGAACTGG
GCCGGCAACTGCCGGCGGAGCGCGACCATCGACTGCGGCGGCGAGATGGACGTCTGCCGCAAGGTGAGGCGTGAC
CCGGCGGTGGTGTCGGCGCGGACGCGGGGGTTCATGGGCATACCGTCGCGCGAGACGGGCAAGATCTACCGGCCC
CACGACCTCGACTGCCCGCAGCTGTACGACTGGAGCTGGCGGCAGTGCTGGGCGAGCGACGGGCCGCGGTACGGG
CGGCGCGAGCGGGCGTGCCGGGTGCGGGCGCCCATCATGGAGGCCGGGTCGGGCGGCCGGCCGCTCTTCACCACC
GTCTTCGTCAAGGAGGACCACCGGAGCGAGCGGCCCGAGGCGGCGGTGCGGATGGGCGCCGCGTGCATCGTGCAG
CTGCAGTCGGGCCGGTGGTACGACGCCGAGGACGACACCTTCTACGACGAGGCCTCGGGCGGCTGGCTCCCGAGG
GGCGGGGCGGTGCCGCTGCCGGCGATCGCGGAGAGCCTCCGGCGGCCCAACTGCTCGACGGCAACGGGGAGCAAC
AACAGGGCGGCGAGGAGGGCGGTGGCCGGGCGGCGGCGCGCCGAGGTCACGGTGGTTGCGGGATTCCGGGGCTTT
GGGAGCGGAGTGACGATGGCGTAG
Gene >Hirsu2|3957
ATGCTGCTCAACACACTAGTTCCCCTTCTCTTGGCAGCGTCGGTCCTGGGCAACATGCCCGTCGATCCCGAAGCG
GTGGCCAAGAACTTCACCGACTCGCTGCTGGCAAAGACGACACTCGACTGGAAGCAGCCGCCGCACTTCGACCAG
CAAGTGACGGAGCCGACGTGTGCCAATCTCATCTTCCAATGCCTGCATGCGACATTCCGGCTGCGGCAGACGTTG
CTGCCGTCGTCCAAGCCCAAACTCAGCGTCGACTTTGACCGGGTTTCGCAGCGGCGCTTCCTCAACCTCAACAAC
GAGCAGGTGGTGCTGAGCACGGACGAGTCGGTGTGGACGTCGGAGGGTTCCAGCAACGGCTGGCGGGTCGGGGCG
GCGCTGTCGGGCAAGTCGATCTCGGTGTCGTCGGACGTGTCGTTCTCGACTCACGCGTCGACGACGAGGATCCAG
TCGCTGGGCATCACGGAGACGTGCCCCGGCGGACACGAGTGCCACTTCGAGACGTGGGTGTACCACACGAACTGG
GCCGGCAACTGCCGGCGGAGCGCGACCATCGACTGCGGCGGCGAGATGGACGTCTGCCGCAAGGTGAGGCGTGAC
CCGGCGGTGGTGTCGGCGCGGACGCGGGGGTTCATGGGCATACCGTCGCGCGAGACGGGCAAGATCTACCGGCCC
CACGACCTCGACTGCCCGCAGCTGTACGACTGGAGCTGGCGGCAGTGCTGGGCGAGCGACGGGCCGCGGTACGGG
CGGCGCGAGCGGGCGTGCCGGGTGCGGGCGCCCATCATGGAGGCCGGGTCGGGCGGCCGGCCGCTCTTCACCACC
GTCTTCGTCAAGGAGGACCACCGGAGCGAGCGGCCCGAGGCGGCGGTGCGGATGGGCGCCGCGTGCATCGTGCAG
CTGCAGTCGGGCCGGTGGTACGACGCCGAGGACGACACCTTCTACGACGAGGCCTCGGGCGGCTGGCTCCCGAGG
GGCGGGGCGGTGCCGCTGCCGGCGATCGCGGAGAGCCTCCGGCGGCCCAACTGCTCGACGGCAACGGGGAGCAAC
AACAGGGCGGCGAGGAGGGCGGTGGCCGGGCGGCGGCGCGCCGAGGTCACGGTGGTTGCGGGATTCCGGGGCTTT
GGGAGCGGAGTGACGATGGCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail