Protein ID | Hirsu2|3957 |
Gene name | |
Location | Contig_2070:552..1701 |
Strand | - |
Gene length (bp) | 1149 |
Transcript length (bp) | 1149 |
Coding sequence length (bp) | 1149 |
Protein length (aa) | 383 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1782 | 0.0622 | 0.9252 | 0.1625 | 0.0897 | 0.0617 | 0.1417 | 0.346 | 0.1836 | 0.007 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.999734 |
Orthofinder run ID | 4 |
Orthogroup | 95 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3957 MLLNTLVPLLLAASVLGNMPVDPEAVAKNFTDSLLAKTTLDWKQPPHFDQQVTEPTCANLIFQCLHATFRLRQTL LPSSKPKLSVDFDRVSQRRFLNLNNEQVVLSTDESVWTSEGSSNGWRVGAALSGKSISVSSDVSFSTHASTTRIQ SLGITETCPGGHECHFETWVYHTNWAGNCRRSATIDCGGEMDVCRKVRRDPAVVSARTRGFMGIPSRETGKIYRP HDLDCPQLYDWSWRQCWASDGPRYGRRERACRVRAPIMEAGSGGRPLFTTVFVKEDHRSERPEAAVRMGAACIVQ LQSGRWYDAEDDTFYDEASGGWLPRGGAVPLPAIAESLRRPNCSTATGSNNRAARRAVAGRRRAEVTVVAGFRGF GSGVTMA* |
Coding | >Hirsu2|3957 ATGCTGCTCAACACACTAGTTCCCCTTCTCTTGGCAGCGTCGGTCCTGGGCAACATGCCCGTCGATCCCGAAGCG GTGGCCAAGAACTTCACCGACTCGCTGCTGGCAAAGACGACACTCGACTGGAAGCAGCCGCCGCACTTCGACCAG CAAGTGACGGAGCCGACGTGTGCCAATCTCATCTTCCAATGCCTGCATGCGACATTCCGGCTGCGGCAGACGTTG CTGCCGTCGTCCAAGCCCAAACTCAGCGTCGACTTTGACCGGGTTTCGCAGCGGCGCTTCCTCAACCTCAACAAC GAGCAGGTGGTGCTGAGCACGGACGAGTCGGTGTGGACGTCGGAGGGTTCCAGCAACGGCTGGCGGGTCGGGGCG GCGCTGTCGGGCAAGTCGATCTCGGTGTCGTCGGACGTGTCGTTCTCGACTCACGCGTCGACGACGAGGATCCAG TCGCTGGGCATCACGGAGACGTGCCCCGGCGGACACGAGTGCCACTTCGAGACGTGGGTGTACCACACGAACTGG GCCGGCAACTGCCGGCGGAGCGCGACCATCGACTGCGGCGGCGAGATGGACGTCTGCCGCAAGGTGAGGCGTGAC CCGGCGGTGGTGTCGGCGCGGACGCGGGGGTTCATGGGCATACCGTCGCGCGAGACGGGCAAGATCTACCGGCCC CACGACCTCGACTGCCCGCAGCTGTACGACTGGAGCTGGCGGCAGTGCTGGGCGAGCGACGGGCCGCGGTACGGG CGGCGCGAGCGGGCGTGCCGGGTGCGGGCGCCCATCATGGAGGCCGGGTCGGGCGGCCGGCCGCTCTTCACCACC GTCTTCGTCAAGGAGGACCACCGGAGCGAGCGGCCCGAGGCGGCGGTGCGGATGGGCGCCGCGTGCATCGTGCAG CTGCAGTCGGGCCGGTGGTACGACGCCGAGGACGACACCTTCTACGACGAGGCCTCGGGCGGCTGGCTCCCGAGG GGCGGGGCGGTGCCGCTGCCGGCGATCGCGGAGAGCCTCCGGCGGCCCAACTGCTCGACGGCAACGGGGAGCAAC AACAGGGCGGCGAGGAGGGCGGTGGCCGGGCGGCGGCGCGCCGAGGTCACGGTGGTTGCGGGATTCCGGGGCTTT GGGAGCGGAGTGACGATGGCGTAG |
Transcript | >Hirsu2|3957 ATGCTGCTCAACACACTAGTTCCCCTTCTCTTGGCAGCGTCGGTCCTGGGCAACATGCCCGTCGATCCCGAAGCG GTGGCCAAGAACTTCACCGACTCGCTGCTGGCAAAGACGACACTCGACTGGAAGCAGCCGCCGCACTTCGACCAG CAAGTGACGGAGCCGACGTGTGCCAATCTCATCTTCCAATGCCTGCATGCGACATTCCGGCTGCGGCAGACGTTG CTGCCGTCGTCCAAGCCCAAACTCAGCGTCGACTTTGACCGGGTTTCGCAGCGGCGCTTCCTCAACCTCAACAAC GAGCAGGTGGTGCTGAGCACGGACGAGTCGGTGTGGACGTCGGAGGGTTCCAGCAACGGCTGGCGGGTCGGGGCG GCGCTGTCGGGCAAGTCGATCTCGGTGTCGTCGGACGTGTCGTTCTCGACTCACGCGTCGACGACGAGGATCCAG TCGCTGGGCATCACGGAGACGTGCCCCGGCGGACACGAGTGCCACTTCGAGACGTGGGTGTACCACACGAACTGG GCCGGCAACTGCCGGCGGAGCGCGACCATCGACTGCGGCGGCGAGATGGACGTCTGCCGCAAGGTGAGGCGTGAC CCGGCGGTGGTGTCGGCGCGGACGCGGGGGTTCATGGGCATACCGTCGCGCGAGACGGGCAAGATCTACCGGCCC CACGACCTCGACTGCCCGCAGCTGTACGACTGGAGCTGGCGGCAGTGCTGGGCGAGCGACGGGCCGCGGTACGGG CGGCGCGAGCGGGCGTGCCGGGTGCGGGCGCCCATCATGGAGGCCGGGTCGGGCGGCCGGCCGCTCTTCACCACC GTCTTCGTCAAGGAGGACCACCGGAGCGAGCGGCCCGAGGCGGCGGTGCGGATGGGCGCCGCGTGCATCGTGCAG CTGCAGTCGGGCCGGTGGTACGACGCCGAGGACGACACCTTCTACGACGAGGCCTCGGGCGGCTGGCTCCCGAGG GGCGGGGCGGTGCCGCTGCCGGCGATCGCGGAGAGCCTCCGGCGGCCCAACTGCTCGACGGCAACGGGGAGCAAC AACAGGGCGGCGAGGAGGGCGGTGGCCGGGCGGCGGCGCGCCGAGGTCACGGTGGTTGCGGGATTCCGGGGCTTT GGGAGCGGAGTGACGATGGCGTAG |
Gene | >Hirsu2|3957 ATGCTGCTCAACACACTAGTTCCCCTTCTCTTGGCAGCGTCGGTCCTGGGCAACATGCCCGTCGATCCCGAAGCG GTGGCCAAGAACTTCACCGACTCGCTGCTGGCAAAGACGACACTCGACTGGAAGCAGCCGCCGCACTTCGACCAG CAAGTGACGGAGCCGACGTGTGCCAATCTCATCTTCCAATGCCTGCATGCGACATTCCGGCTGCGGCAGACGTTG CTGCCGTCGTCCAAGCCCAAACTCAGCGTCGACTTTGACCGGGTTTCGCAGCGGCGCTTCCTCAACCTCAACAAC GAGCAGGTGGTGCTGAGCACGGACGAGTCGGTGTGGACGTCGGAGGGTTCCAGCAACGGCTGGCGGGTCGGGGCG GCGCTGTCGGGCAAGTCGATCTCGGTGTCGTCGGACGTGTCGTTCTCGACTCACGCGTCGACGACGAGGATCCAG TCGCTGGGCATCACGGAGACGTGCCCCGGCGGACACGAGTGCCACTTCGAGACGTGGGTGTACCACACGAACTGG GCCGGCAACTGCCGGCGGAGCGCGACCATCGACTGCGGCGGCGAGATGGACGTCTGCCGCAAGGTGAGGCGTGAC CCGGCGGTGGTGTCGGCGCGGACGCGGGGGTTCATGGGCATACCGTCGCGCGAGACGGGCAAGATCTACCGGCCC CACGACCTCGACTGCCCGCAGCTGTACGACTGGAGCTGGCGGCAGTGCTGGGCGAGCGACGGGCCGCGGTACGGG CGGCGCGAGCGGGCGTGCCGGGTGCGGGCGCCCATCATGGAGGCCGGGTCGGGCGGCCGGCCGCTCTTCACCACC GTCTTCGTCAAGGAGGACCACCGGAGCGAGCGGCCCGAGGCGGCGGTGCGGATGGGCGCCGCGTGCATCGTGCAG CTGCAGTCGGGCCGGTGGTACGACGCCGAGGACGACACCTTCTACGACGAGGCCTCGGGCGGCTGGCTCCCGAGG GGCGGGGCGGTGCCGCTGCCGGCGATCGCGGAGAGCCTCCGGCGGCCCAACTGCTCGACGGCAACGGGGAGCAAC AACAGGGCGGCGAGGAGGGCGGTGGCCGGGCGGCGGCGCGCCGAGGTCACGGTGGTTGCGGGATTCCGGGGCTTT GGGAGCGGAGTGACGATGGCGTAG |