Protein ID | Hirsu2|3955 |
Gene name | |
Location | Contig_207:25129..26190 |
Strand | + |
Gene length (bp) | 1061 |
Transcript length (bp) | 939 |
Coding sequence length (bp) | 939 |
Protein length (aa) | 313 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13472 | Lipase_GDSL_2 | GDSL-like Lipase/Acylhydrolase family | 7.7E-16 | 69 | 257 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | 0.095 | 0.0661 | 0.7918 | 0.4235 | 0.0929 | 0.0249 | 0.1835 | 0.2304 | 0.156 | 0.0208 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 19 | 0.680945 |
CAZyme category | E-value | Start | End |
---|---|---|---|
CE3 | 6.0E-42 | 65 | 265 |
Orthofinder run ID | 4 |
Orthogroup | 547 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3955 MRASRVWTAASCLLGVAAGVAIEKQQVVLRRGSVLSTWNGNGPAPMLNPRDLASRRDAIKPGTELRILCAGDSIT LGTLSDTDGGDGNGYRLHLRNNLSGDKVVFAGTVTTKTGTMGDGYFAAWPGKTIKYIGDNIEPSLRQRPNIILLH AGTNDMNPNPAISKEGNDPAQAVDRLGALVDRMVAACPDAVILVAMIINTCDAAQAPATHEFQRLIPAMVQRRYN DGRHVLTANMTSFPTSELRPDCIHPTNSGYRLLGDYWHDFVAQIPRDWIQRPTVPDPHQSGGSSLDQNLFSSLLA AITLLVGQGLGL* |
Coding | >Hirsu2|3955 ATGCGGGCTTCTCGTGTGTGGACGGCCGCCTCGTGCCTACTCGGGGTTGCAGCCGGTGTCGCCATCGAGAAACAG CAGGTCGTGCTCCGGAGGGGCTCGGTGCTGAGCACTTGGAACGGCAATGGCCCGGCGCCGATGCTGAACCCGCGG GACCTGGCGAGTCGGCGCGATGCCATCAAGCCGGGGACTGAGCTTCGCATCCTCTGTGCCGGCGACTCCATCACG CTGGGGACCCTGAGCGACACCGACGGCGGCGATGGCAACGGCTACAGGCTCCATCTGCGAAACAATTTGTCAGGG GACAAGGTTGTCTTTGCAGGAACCGTCACCACCAAGACGGGGACGATGGGCGACGGCTACTTTGCAGCCTGGCCC GGCAAGACGATAAAGTACATCGGCGACAACATCGAGCCGTCGCTGCGGCAGCGGCCCAACATCATTCTCCTCCAC GCGGGCACCAACGACATGAACCCCAATCCGGCCATCTCGAAGGAGGGTAACGATCCAGCGCAGGCGGTGGACAGG CTGGGCGCACTGGTCGACCGCATGGTTGCGGCGTGCCCCGACGCCGTCATCCTCGTGGCCATGATCATCAACACA TGCGACGCTGCGCAGGCGCCGGCGACGCACGAGTTTCAGAGGCTGATCCCCGCCATGGTCCAGCGGCGGTACAAC GACGGCCGCCACGTCCTGACCGCCAACATGACATCCTTTCCCACGTCGGAGCTCAGGCCGGACTGTATTCATCCG ACCAACTCGGGCTACCGGCTGCTCGGCGACTACTGGCACGATTTCGTCGCGCAAATCCCGCGCGATTGGATCCAA AGGCCGACGGTTCCCGATCCGCATCAATCGGGCGGCAGCAGCCTGGACCAGAACCTATTTTCCTCACTCCTGGCC GCCATCACGCTCCTGGTGGGCCAAGGCCTGGGATTGTGA |
Transcript | >Hirsu2|3955 ATGCGGGCTTCTCGTGTGTGGACGGCCGCCTCGTGCCTACTCGGGGTTGCAGCCGGTGTCGCCATCGAGAAACAG CAGGTCGTGCTCCGGAGGGGCTCGGTGCTGAGCACTTGGAACGGCAATGGCCCGGCGCCGATGCTGAACCCGCGG GACCTGGCGAGTCGGCGCGATGCCATCAAGCCGGGGACTGAGCTTCGCATCCTCTGTGCCGGCGACTCCATCACG CTGGGGACCCTGAGCGACACCGACGGCGGCGATGGCAACGGCTACAGGCTCCATCTGCGAAACAATTTGTCAGGG GACAAGGTTGTCTTTGCAGGAACCGTCACCACCAAGACGGGGACGATGGGCGACGGCTACTTTGCAGCCTGGCCC GGCAAGACGATAAAGTACATCGGCGACAACATCGAGCCGTCGCTGCGGCAGCGGCCCAACATCATTCTCCTCCAC GCGGGCACCAACGACATGAACCCCAATCCGGCCATCTCGAAGGAGGGTAACGATCCAGCGCAGGCGGTGGACAGG CTGGGCGCACTGGTCGACCGCATGGTTGCGGCGTGCCCCGACGCCGTCATCCTCGTGGCCATGATCATCAACACA TGCGACGCTGCGCAGGCGCCGGCGACGCACGAGTTTCAGAGGCTGATCCCCGCCATGGTCCAGCGGCGGTACAAC GACGGCCGCCACGTCCTGACCGCCAACATGACATCCTTTCCCACGTCGGAGCTCAGGCCGGACTGTATTCATCCG ACCAACTCGGGCTACCGGCTGCTCGGCGACTACTGGCACGATTTCGTCGCGCAAATCCCGCGCGATTGGATCCAA AGGCCGACGGTTCCCGATCCGCATCAATCGGGCGGCAGCAGCCTGGACCAGAACCTATTTTCCTCACTCCTGGCC GCCATCACGCTCCTGGTGGGCCAAGGCCTGGGATTGTGA |
Gene | >Hirsu2|3955 ATGCGGGCTTCTCGTGTGTGGACGGCCGCCTCGTGCCTACTCGGGGTTGCAGCCGGTGTCGCCATCGAGAAACAG CAGGTCGTGCTCCGGAGGGGCTCGGTGCTGAGCACTTGGAACGGCAATGGCCCGGCGCCGATGCTGAACCCGCGG GACCTGGCGAGTCGGCGCGATGCCATCAAGCCGGGGACTGAGCTTCGCATCCTCTGTGCCGGCGACTCCATCACG CTGGGGACCCTGAGCGACACCGACGGCGGCGATGGCAACGGCTACAGGCTCCATCTGCGAAACAATTTGTCAGGT GAGCTGGCCGTCGTGCAACTGTCGAGGGGGCTGCCGCTGACACCGCCATGTCTCAGGGGACAAGGTTGTCTTTGC AGGAACCGTCACCACCAAGACGGGGACGATGGGCGACGGCTACTTTGTCAGTGAGCCCTTGTTGACATCCTCATG CCACTCTCGCCGGACTGACAGTGAGGCTCGAACAGGCAGCCTGGCCCGGCAAGACGATAAAGTACATCGGCGACA ACATCGAGCCGTCGCTGCGGCAGCGGCCCAACATCATTCTCCTCCACGCGGGCACCAACGACATGAACCCCAATC CGGCCATCTCGAAGGAGGGTAACGATCCAGCGCAGGCGGTGGACAGGCTGGGCGCACTGGTCGACCGCATGGTTG CGGCGTGCCCCGACGCCGTCATCCTCGTGGCCATGATCATCAACACATGCGACGCTGCGCAGGCGCCGGCGACGC ACGAGTTTCAGAGGCTGATCCCCGCCATGGTCCAGCGGCGGTACAACGACGGCCGCCACGTCCTGACCGCCAACA TGACATCCTTTCCCACGTCGGAGCTCAGGCCGGACTGTATTCATCCGACCAACTCGGGCTACCGGCTGCTCGGCG ACTACTGGCACGATTTCGTCGCGCAAATCCCGCGCGATTGGATCCAAAGGCCGACGGTTCCCGATCCGCATCAAT CGGGCGGCAGCAGCCTGGACCAGAACCTATTTTCCTCACTCCTGGCCGCCATCACGCTCCTGGTGGGCCAAGGCC TGGGATTGTGA |