Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|39
Gene name
LocationContig_1000:3113..3524
Strand-
Gene length (bp)411
Transcript length (bp)411
Coding sequence length (bp)411
Protein length (aa) 137

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.6563 0.5666 0.5738 0.1073 0.1852 0.1168 0.1108 0.067 0.0874 0.0318

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9458
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|39 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|39
MPRRRDIPADTVFCIIYCPSSRPSRGRRPSPEPSSESSSEARPAVRLEPKQPAQARNQPSHRPKPDLLFCSRPAS
AGVRAARTQRLPTPNVTAPASIARRLPSSTRPDYMSAAETATSPARLRQSDRMCLESNSDA*
Coding >Hirsu2|39
ATGCCCAGACGTAGAGACATCCCTGCCGACACCGTCTTTTGCATTATTTATTGCCCGTCGTCCCGTCCAAGCCGC
GGCCGTCGTCCCTCGCCCGAGCCCTCGTCCGAATCCTCGTCCGAAGCCCGCCCTGCCGTCCGACTCGAGCCGAAG
CAGCCCGCTCAGGCCCGAAACCAGCCAAGTCATCGCCCAAAGCCGGACCTCCTGTTCTGTAGTCGTCCCGCCTCC
GCTGGCGTGCGTGCCGCGCGCACACAGCGCCTCCCGACGCCAAACGTCACCGCGCCCGCTTCCATCGCCAGACGC
CTCCCGTCGTCGACAAGGCCAGACTACATGAGCGCCGCCGAGACGGCCACTTCGCCAGCCCGCCTCCGCCAATCA
GACCGCATGTGCCTTGAGAGCAACTCGGACGCATAG
Transcript >Hirsu2|39
ATGCCCAGACGTAGAGACATCCCTGCCGACACCGTCTTTTGCATTATTTATTGCCCGTCGTCCCGTCCAAGCCGC
GGCCGTCGTCCCTCGCCCGAGCCCTCGTCCGAATCCTCGTCCGAAGCCCGCCCTGCCGTCCGACTCGAGCCGAAG
CAGCCCGCTCAGGCCCGAAACCAGCCAAGTCATCGCCCAAAGCCGGACCTCCTGTTCTGTAGTCGTCCCGCCTCC
GCTGGCGTGCGTGCCGCGCGCACACAGCGCCTCCCGACGCCAAACGTCACCGCGCCCGCTTCCATCGCCAGACGC
CTCCCGTCGTCGACAAGGCCAGACTACATGAGCGCCGCCGAGACGGCCACTTCGCCAGCCCGCCTCCGCCAATCA
GACCGCATGTGCCTTGAGAGCAACTCGGACGCATAG
Gene >Hirsu2|39
ATGCCCAGACGTAGAGACATCCCTGCCGACACCGTCTTTTGCATTATTTATTGCCCGTCGTCCCGTCCAAGCCGC
GGCCGTCGTCCCTCGCCCGAGCCCTCGTCCGAATCCTCGTCCGAAGCCCGCCCTGCCGTCCGACTCGAGCCGAAG
CAGCCCGCTCAGGCCCGAAACCAGCCAAGTCATCGCCCAAAGCCGGACCTCCTGTTCTGTAGTCGTCCCGCCTCC
GCTGGCGTGCGTGCCGCGCGCACACAGCGCCTCCCGACGCCAAACGTCACCGCGCCCGCTTCCATCGCCAGACGC
CTCCCGTCGTCGACAAGGCCAGACTACATGAGCGCCGCCGAGACGGCCACTTCGCCAGCCCGCCTCCGCCAATCA
GACCGCATGTGCCTTGAGAGCAACTCGGACGCATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail