Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3894
Gene name
LocationContig_2049:2981..3869
Strand-
Gene length (bp)888
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 4.6E-15 1 275

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.6465 0.7855 0.0092 0.0607 0.1196 0.01 0.0522 0.0337 0.0597 0.2662

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.998434

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7018
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1401
Ophiocordyceps australis map64 (Brazil) OphauB2|355
Ophiocordyceps subramaniannii Hirsu2|3894 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3894
MLAAILIISTYEMANAQAAAAESHRMAARTIVNVFGSHVACRDRVFDFLRNQMSILDILSSTTSFDLADVERAVM
PPLSMANGLFTQFLTLLHRVTLVSRRRMSDGRPPDLVLHPDLYHGAGQPHGSSSSDHGHDLSASAIRSQFQQATS
ATLLAAGRLQVQTSVVGRDFIRLVHIYHHAAILYSYRSLGHVASERADWEATMVKLFEQLSALEDAALCAQNLPW
PAFVAGTECHADPARQAAVAALFALMTDATGFRHFLDVLHFLRLFWAGPHPDWRPLARDLQHKGFRILAV*
Coding >Hirsu2|3894
ATGCTGGCGGCCATCCTGATCATCTCGACGTACGAGATGGCCAACGCGCAGGCGGCCGCGGCCGAGAGCCACCGG
ATGGCGGCCCGGACCATCGTCAACGTCTTCGGCAGCCACGTGGCGTGCCGCGACCGCGTCTTCGACTTCCTGCGC
AACCAGATGTCCATCCTCGACATCCTGTCCTCGACCACGTCGTTCGACCTGGCCGACGTCGAGCGCGCCGTCATG
CCGCCGCTGAGCATGGCCAACGGCCTGTTCACCCAGTTCCTGACGCTGCTGCACCGCGTCACGCTCGTGTCGCGC
CGGCGCATGAGCGACGGCCGTCCGCCGGACCTGGTGCTGCACCCCGACCTCTACCACGGCGCCGGCCAGCCTCAC
GGCAGCAGCAGCAGCGACCACGGGCACGACCTCAGCGCCAGCGCGATCCGCTCGCAGTTCCAGCAGGCGACGAGC
GCGACGCTGCTGGCGGCCGGCCGGCTGCAGGTGCAGACGTCGGTCGTCGGCCGCGACTTCATCCGCCTCGTCCAC
ATCTACCACCACGCCGCCATCCTGTACTCGTACCGCAGCCTGGGCCACGTCGCCTCCGAGCGCGCCGACTGGGAG
GCCACCATGGTCAAGCTGTTCGAGCAGCTGTCGGCGCTCGAGGACGCCGCCCTGTGCGCCCAGAACCTGCCGTGG
CCGGCCTTCGTCGCCGGCACCGAGTGCCACGCCGACCCGGCCCGCCAGGCCGCCGTCGCCGCCCTCTTCGCCCTC
ATGACCGACGCCACCGGCTTCCGCCACTTCCTCGACGTCCTCCACTTCCTCCGCCTCTTCTGGGCCGGGCCCCAC
CCCGACTGGCGGCCTCTGGCCCGCGACCTGCAGCACAAGGGCTTCCGTATCCTCGCCGTCTGA
Transcript >Hirsu2|3894
ATGCTGGCGGCCATCCTGATCATCTCGACGTACGAGATGGCCAACGCGCAGGCGGCCGCGGCCGAGAGCCACCGG
ATGGCGGCCCGGACCATCGTCAACGTCTTCGGCAGCCACGTGGCGTGCCGCGACCGCGTCTTCGACTTCCTGCGC
AACCAGATGTCCATCCTCGACATCCTGTCCTCGACCACGTCGTTCGACCTGGCCGACGTCGAGCGCGCCGTCATG
CCGCCGCTGAGCATGGCCAACGGCCTGTTCACCCAGTTCCTGACGCTGCTGCACCGCGTCACGCTCGTGTCGCGC
CGGCGCATGAGCGACGGCCGTCCGCCGGACCTGGTGCTGCACCCCGACCTCTACCACGGCGCCGGCCAGCCTCAC
GGCAGCAGCAGCAGCGACCACGGGCACGACCTCAGCGCCAGCGCGATCCGCTCGCAGTTCCAGCAGGCGACGAGC
GCGACGCTGCTGGCGGCCGGCCGGCTGCAGGTGCAGACGTCGGTCGTCGGCCGCGACTTCATCCGCCTCGTCCAC
ATCTACCACCACGCCGCCATCCTGTACTCGTACCGCAGCCTGGGCCACGTCGCCTCCGAGCGCGCCGACTGGGAG
GCCACCATGGTCAAGCTGTTCGAGCAGCTGTCGGCGCTCGAGGACGCCGCCCTGTGCGCCCAGAACCTGCCGTGG
CCGGCCTTCGTCGCCGGCACCGAGTGCCACGCCGACCCGGCCCGCCAGGCCGCCGTCGCCGCCCTCTTCGCCCTC
ATGACCGACGCCACCGGCTTCCGCCACTTCCTCGACGTCCTCCACTTCCTCCGCCTCTTCTGGGCCGGGCCCCAC
CCCGACTGGCGGCCTCTGGCCCGCGACCTGCAGCACAAGGGCTTCCGTATCCTCGCCGTCTGA
Gene >Hirsu2|3894
ATGCTGGCGGCCATCCTGATCATCTCGACGTACGAGATGGCCAACGCGCAGGCGGCCGCGGCCGAGAGCCACCGG
ATGGCGGCCCGGACCATCGTCAACGTCTTCGGCAGCCACGTGGCGTGCCGCGACCGCGTCTTCGACTTCCTGCGC
AACCAGATGTCCATCCTCGACATCCTGTCCTCGACCACGTCGTTCGACCTGGCCGACGTCGAGCGCGCCGTCATG
CCGCCGCTGAGCATGGCCAACGGCCTGTTCACCCAGTTCCTGACGCTGCTGCACCGCGTCACGCTCGTGTCGCGC
CGGCGCATGAGCGACGGCCGTCCGCCGGACCTGGTGCTGCACCCCGACCTCTACCACGGCGCCGGCCAGCCTCAC
GGCAGCAGCAGCAGCGACCACGGGCACGACCTCAGCGCCAGCGCGATCCGCTCGCAGTTCCAGCAGGCGACGAGC
GCGACGCTGCTGGCGGCCGGCCGGCTGCAGGTGCAGACGTCGGTCGTCGGCCGCGACTTCATCCGCCTCGTCCAC
ATCTACCACCACGCCGCCATCCTGTACTCGTACCGCAGCCTGGGCCACGTCGCCTCCGAGCGCGCCGACTGGGAG
GCCACCATGGTCAAGCTGTTCGAGCAGCTGTCGGCGCTCGAGGACGCCGCCCTGTGCGCCCAGAACCTGCCGTGG
CCGGCCTTCGTCGCCGGCACCGAGTGCCACGCCGACCCGGCCCGCCAGGCCGCCGTCGCCGCCCTCTTCGCCCTC
ATGACCGACGCCACCGGCTTCCGCCACTTCCTCGACGTCCTCCACTTCCTCCGCCTCTTCTGGGCCGGGCCCCAC
CCCGACTGGCGGCCTCTGGCCCGCGACCTGCAGCACAAGGGCTTCCGTATCCTCGCCGTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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