Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3894
Gene name
LocationContig_2049:2981..3869
Strand-
Gene length (bp)888
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 4.6E-15 1 275

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3894
MLAAILIISTYEMANAQAAAAESHRMAARTIVNVFGSHVACRDRVFDFLRNQMSILDILSSTTSFDLADVERAVM
PPLSMANGLFTQFLTLLHRVTLVSRRRMSDGRPPDLVLHPDLYHGAGQPHGSSSSDHGHDLSASAIRSQFQQATS
ATLLAAGRLQVQTSVVGRDFIRLVHIYHHAAILYSYRSLGHVASERADWEATMVKLFEQLSALEDAALCAQNLPW
PAFVAGTECHADPARQAAVAALFALMTDATGFRHFLDVLHFLRLFWAGPHPDWRPLARDLQHKGFRILAV*
Coding >Hirsu2|3894
ATGCTGGCGGCCATCCTGATCATCTCGACGTACGAGATGGCCAACGCGCAGGCGGCCGCGGCCGAGAGCCACCGG
ATGGCGGCCCGGACCATCGTCAACGTCTTCGGCAGCCACGTGGCGTGCCGCGACCGCGTCTTCGACTTCCTGCGC
AACCAGATGTCCATCCTCGACATCCTGTCCTCGACCACGTCGTTCGACCTGGCCGACGTCGAGCGCGCCGTCATG
CCGCCGCTGAGCATGGCCAACGGCCTGTTCACCCAGTTCCTGACGCTGCTGCACCGCGTCACGCTCGTGTCGCGC
CGGCGCATGAGCGACGGCCGTCCGCCGGACCTGGTGCTGCACCCCGACCTCTACCACGGCGCCGGCCAGCCTCAC
GGCAGCAGCAGCAGCGACCACGGGCACGACCTCAGCGCCAGCGCGATCCGCTCGCAGTTCCAGCAGGCGACGAGC
GCGACGCTGCTGGCGGCCGGCCGGCTGCAGGTGCAGACGTCGGTCGTCGGCCGCGACTTCATCCGCCTCGTCCAC
ATCTACCACCACGCCGCCATCCTGTACTCGTACCGCAGCCTGGGCCACGTCGCCTCCGAGCGCGCCGACTGGGAG
GCCACCATGGTCAAGCTGTTCGAGCAGCTGTCGGCGCTCGAGGACGCCGCCCTGTGCGCCCAGAACCTGCCGTGG
CCGGCCTTCGTCGCCGGCACCGAGTGCCACGCCGACCCGGCCCGCCAGGCCGCCGTCGCCGCCCTCTTCGCCCTC
ATGACCGACGCCACCGGCTTCCGCCACTTCCTCGACGTCCTCCACTTCCTCCGCCTCTTCTGGGCCGGGCCCCAC
CCCGACTGGCGGCCTCTGGCCCGCGACCTGCAGCACAAGGGCTTCCGTATCCTCGCCGTCTGA
Transcript >Hirsu2|3894
ATGCTGGCGGCCATCCTGATCATCTCGACGTACGAGATGGCCAACGCGCAGGCGGCCGCGGCCGAGAGCCACCGG
ATGGCGGCCCGGACCATCGTCAACGTCTTCGGCAGCCACGTGGCGTGCCGCGACCGCGTCTTCGACTTCCTGCGC
AACCAGATGTCCATCCTCGACATCCTGTCCTCGACCACGTCGTTCGACCTGGCCGACGTCGAGCGCGCCGTCATG
CCGCCGCTGAGCATGGCCAACGGCCTGTTCACCCAGTTCCTGACGCTGCTGCACCGCGTCACGCTCGTGTCGCGC
CGGCGCATGAGCGACGGCCGTCCGCCGGACCTGGTGCTGCACCCCGACCTCTACCACGGCGCCGGCCAGCCTCAC
GGCAGCAGCAGCAGCGACCACGGGCACGACCTCAGCGCCAGCGCGATCCGCTCGCAGTTCCAGCAGGCGACGAGC
GCGACGCTGCTGGCGGCCGGCCGGCTGCAGGTGCAGACGTCGGTCGTCGGCCGCGACTTCATCCGCCTCGTCCAC
ATCTACCACCACGCCGCCATCCTGTACTCGTACCGCAGCCTGGGCCACGTCGCCTCCGAGCGCGCCGACTGGGAG
GCCACCATGGTCAAGCTGTTCGAGCAGCTGTCGGCGCTCGAGGACGCCGCCCTGTGCGCCCAGAACCTGCCGTGG
CCGGCCTTCGTCGCCGGCACCGAGTGCCACGCCGACCCGGCCCGCCAGGCCGCCGTCGCCGCCCTCTTCGCCCTC
ATGACCGACGCCACCGGCTTCCGCCACTTCCTCGACGTCCTCCACTTCCTCCGCCTCTTCTGGGCCGGGCCCCAC
CCCGACTGGCGGCCTCTGGCCCGCGACCTGCAGCACAAGGGCTTCCGTATCCTCGCCGTCTGA
Gene >Hirsu2|3894
ATGCTGGCGGCCATCCTGATCATCTCGACGTACGAGATGGCCAACGCGCAGGCGGCCGCGGCCGAGAGCCACCGG
ATGGCGGCCCGGACCATCGTCAACGTCTTCGGCAGCCACGTGGCGTGCCGCGACCGCGTCTTCGACTTCCTGCGC
AACCAGATGTCCATCCTCGACATCCTGTCCTCGACCACGTCGTTCGACCTGGCCGACGTCGAGCGCGCCGTCATG
CCGCCGCTGAGCATGGCCAACGGCCTGTTCACCCAGTTCCTGACGCTGCTGCACCGCGTCACGCTCGTGTCGCGC
CGGCGCATGAGCGACGGCCGTCCGCCGGACCTGGTGCTGCACCCCGACCTCTACCACGGCGCCGGCCAGCCTCAC
GGCAGCAGCAGCAGCGACCACGGGCACGACCTCAGCGCCAGCGCGATCCGCTCGCAGTTCCAGCAGGCGACGAGC
GCGACGCTGCTGGCGGCCGGCCGGCTGCAGGTGCAGACGTCGGTCGTCGGCCGCGACTTCATCCGCCTCGTCCAC
ATCTACCACCACGCCGCCATCCTGTACTCGTACCGCAGCCTGGGCCACGTCGCCTCCGAGCGCGCCGACTGGGAG
GCCACCATGGTCAAGCTGTTCGAGCAGCTGTCGGCGCTCGAGGACGCCGCCCTGTGCGCCCAGAACCTGCCGTGG
CCGGCCTTCGTCGCCGGCACCGAGTGCCACGCCGACCCGGCCCGCCAGGCCGCCGTCGCCGCCCTCTTCGCCCTC
ATGACCGACGCCACCGGCTTCCGCCACTTCCTCGACGTCCTCCACTTCCTCCGCCTCTTCTGGGCCGGGCCCCAC
CCCGACTGGCGGCCTCTGGCCCGCGACCTGCAGCACAAGGGCTTCCGTATCCTCGCCGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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