Protein ID | Hirsu2|3894 |
Gene name | |
Location | Contig_2049:2981..3869 |
Strand | - |
Gene length (bp) | 888 |
Transcript length (bp) | 888 |
Coding sequence length (bp) | 888 |
Protein length (aa) | 296 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11951 | Fungal_trans_2 | Fungal specific transcription factor domain | 4.6E-15 | 1 | 275 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | 0.6465 | 0.7855 | 0.0092 | 0.0607 | 0.1196 | 0.01 | 0.0522 | 0.0337 | 0.0597 | 0.2662 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.998434 |
Transcription Factor Class (based on PFAM domains) |
---|
Fungal Specific TF |
Orthofinder run ID | 4 |
Orthogroup | 7018 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps australis 1348a (Ghana) | OphauG2|1401 |
Ophiocordyceps australis map64 (Brazil) | OphauB2|355 |
Ophiocordyceps subramaniannii | Hirsu2|3894 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3894 MLAAILIISTYEMANAQAAAAESHRMAARTIVNVFGSHVACRDRVFDFLRNQMSILDILSSTTSFDLADVERAVM PPLSMANGLFTQFLTLLHRVTLVSRRRMSDGRPPDLVLHPDLYHGAGQPHGSSSSDHGHDLSASAIRSQFQQATS ATLLAAGRLQVQTSVVGRDFIRLVHIYHHAAILYSYRSLGHVASERADWEATMVKLFEQLSALEDAALCAQNLPW PAFVAGTECHADPARQAAVAALFALMTDATGFRHFLDVLHFLRLFWAGPHPDWRPLARDLQHKGFRILAV* |
Coding | >Hirsu2|3894 ATGCTGGCGGCCATCCTGATCATCTCGACGTACGAGATGGCCAACGCGCAGGCGGCCGCGGCCGAGAGCCACCGG ATGGCGGCCCGGACCATCGTCAACGTCTTCGGCAGCCACGTGGCGTGCCGCGACCGCGTCTTCGACTTCCTGCGC AACCAGATGTCCATCCTCGACATCCTGTCCTCGACCACGTCGTTCGACCTGGCCGACGTCGAGCGCGCCGTCATG CCGCCGCTGAGCATGGCCAACGGCCTGTTCACCCAGTTCCTGACGCTGCTGCACCGCGTCACGCTCGTGTCGCGC CGGCGCATGAGCGACGGCCGTCCGCCGGACCTGGTGCTGCACCCCGACCTCTACCACGGCGCCGGCCAGCCTCAC GGCAGCAGCAGCAGCGACCACGGGCACGACCTCAGCGCCAGCGCGATCCGCTCGCAGTTCCAGCAGGCGACGAGC GCGACGCTGCTGGCGGCCGGCCGGCTGCAGGTGCAGACGTCGGTCGTCGGCCGCGACTTCATCCGCCTCGTCCAC ATCTACCACCACGCCGCCATCCTGTACTCGTACCGCAGCCTGGGCCACGTCGCCTCCGAGCGCGCCGACTGGGAG GCCACCATGGTCAAGCTGTTCGAGCAGCTGTCGGCGCTCGAGGACGCCGCCCTGTGCGCCCAGAACCTGCCGTGG CCGGCCTTCGTCGCCGGCACCGAGTGCCACGCCGACCCGGCCCGCCAGGCCGCCGTCGCCGCCCTCTTCGCCCTC ATGACCGACGCCACCGGCTTCCGCCACTTCCTCGACGTCCTCCACTTCCTCCGCCTCTTCTGGGCCGGGCCCCAC CCCGACTGGCGGCCTCTGGCCCGCGACCTGCAGCACAAGGGCTTCCGTATCCTCGCCGTCTGA |
Transcript | >Hirsu2|3894 ATGCTGGCGGCCATCCTGATCATCTCGACGTACGAGATGGCCAACGCGCAGGCGGCCGCGGCCGAGAGCCACCGG ATGGCGGCCCGGACCATCGTCAACGTCTTCGGCAGCCACGTGGCGTGCCGCGACCGCGTCTTCGACTTCCTGCGC AACCAGATGTCCATCCTCGACATCCTGTCCTCGACCACGTCGTTCGACCTGGCCGACGTCGAGCGCGCCGTCATG CCGCCGCTGAGCATGGCCAACGGCCTGTTCACCCAGTTCCTGACGCTGCTGCACCGCGTCACGCTCGTGTCGCGC CGGCGCATGAGCGACGGCCGTCCGCCGGACCTGGTGCTGCACCCCGACCTCTACCACGGCGCCGGCCAGCCTCAC GGCAGCAGCAGCAGCGACCACGGGCACGACCTCAGCGCCAGCGCGATCCGCTCGCAGTTCCAGCAGGCGACGAGC GCGACGCTGCTGGCGGCCGGCCGGCTGCAGGTGCAGACGTCGGTCGTCGGCCGCGACTTCATCCGCCTCGTCCAC ATCTACCACCACGCCGCCATCCTGTACTCGTACCGCAGCCTGGGCCACGTCGCCTCCGAGCGCGCCGACTGGGAG GCCACCATGGTCAAGCTGTTCGAGCAGCTGTCGGCGCTCGAGGACGCCGCCCTGTGCGCCCAGAACCTGCCGTGG CCGGCCTTCGTCGCCGGCACCGAGTGCCACGCCGACCCGGCCCGCCAGGCCGCCGTCGCCGCCCTCTTCGCCCTC ATGACCGACGCCACCGGCTTCCGCCACTTCCTCGACGTCCTCCACTTCCTCCGCCTCTTCTGGGCCGGGCCCCAC CCCGACTGGCGGCCTCTGGCCCGCGACCTGCAGCACAAGGGCTTCCGTATCCTCGCCGTCTGA |
Gene | >Hirsu2|3894 ATGCTGGCGGCCATCCTGATCATCTCGACGTACGAGATGGCCAACGCGCAGGCGGCCGCGGCCGAGAGCCACCGG ATGGCGGCCCGGACCATCGTCAACGTCTTCGGCAGCCACGTGGCGTGCCGCGACCGCGTCTTCGACTTCCTGCGC AACCAGATGTCCATCCTCGACATCCTGTCCTCGACCACGTCGTTCGACCTGGCCGACGTCGAGCGCGCCGTCATG CCGCCGCTGAGCATGGCCAACGGCCTGTTCACCCAGTTCCTGACGCTGCTGCACCGCGTCACGCTCGTGTCGCGC CGGCGCATGAGCGACGGCCGTCCGCCGGACCTGGTGCTGCACCCCGACCTCTACCACGGCGCCGGCCAGCCTCAC GGCAGCAGCAGCAGCGACCACGGGCACGACCTCAGCGCCAGCGCGATCCGCTCGCAGTTCCAGCAGGCGACGAGC GCGACGCTGCTGGCGGCCGGCCGGCTGCAGGTGCAGACGTCGGTCGTCGGCCGCGACTTCATCCGCCTCGTCCAC ATCTACCACCACGCCGCCATCCTGTACTCGTACCGCAGCCTGGGCCACGTCGCCTCCGAGCGCGCCGACTGGGAG GCCACCATGGTCAAGCTGTTCGAGCAGCTGTCGGCGCTCGAGGACGCCGCCCTGTGCGCCCAGAACCTGCCGTGG CCGGCCTTCGTCGCCGGCACCGAGTGCCACGCCGACCCGGCCCGCCAGGCCGCCGTCGCCGCCCTCTTCGCCCTC ATGACCGACGCCACCGGCTTCCGCCACTTCCTCGACGTCCTCCACTTCCTCCGCCTCTTCTGGGCCGGGCCCCAC CCCGACTGGCGGCCTCTGGCCCGCGACCTGCAGCACAAGGGCTTCCGTATCCTCGCCGTCTGA |