Protein ID | Hirsu2|389 |
Gene name | |
Location | Contig_1075:8101..9141 |
Strand | + |
Gene length (bp) | 1040 |
Transcript length (bp) | 954 |
Coding sequence length (bp) | 954 |
Protein length (aa) | 318 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P06914|CSP_PLAYO | Circumsporozoite protein OS=Plasmodium yoelii yoelii PE=1 SV=1 | 150 | 264 | 6.0E-08 |
sp|P06914|CSP_PLAYO | Circumsporozoite protein OS=Plasmodium yoelii yoelii PE=1 SV=1 | 188 | 294 | 9.0E-07 |
sp|Q8CQD9|PLS_STAES | Accumulation-associated protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0175 PE=3 SV=1 | 165 | 315 | 4.0E-06 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1191 | 0.0453 | 0.9451 | 0.0752 | 0.0489 | 0.0081 | 0.1087 | 0.1611 | 0.1062 | 0.0016 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.999775 |
Orthofinder run ID | 4 |
Orthogroup | 147 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|389 MKYAFTAAALVGFVLANPIVADECSTGCEKAFDECRGQPHALLPECESKHHGCLDGCHGGKGPEPQPEPHYGGGE ADEVHCACARACNEAYDACCGKEGAQRAECDAHYSKCVGYNPFGPDGVVVKAKFCHPGAEGFHPGGAHPGGEIVI CPGEGCKEGPGGKYPVGPGGPGGPGYPGHPGGPGEVVICPGEGCKEGHGGPGAPGGPGYPGHPGGPGEVVICSGE GCKEGHGGPGGPGGPGYPGHPGGPGAPGGPGYPGHPGGPGEVVICPGEGCKEGPGAKYPVGPGAPGAPGNGYPGG PGENCPGGTRRPRLPRR* |
Coding | >Hirsu2|389 ATGAAGTACGCTTTCACCGCCGCTGCCCTCGTTGGCTTCGTCCTCGCCAACCCCATCGTCGCCGACGAGTGCTCG ACCGGGTGCGAGAAGGCCTTCGACGAGTGCCGCGGCCAGCCGCACGCGCTCCTGCCCGAGTGCGAGTCCAAGCAC CACGGCTGCCTCGACGGCTGCCACGGCGGCAAGGGCCCGGAGCCGCAGCCGGAGCCGCACTACGGCGGCGGCGAG GCCGACGAGGTCCACTGCGCCTGCGCCCGCGCCTGCAACGAGGCCTACGACGCCTGCTGCGGCAAGGAGGGCGCC CAGCGCGCCGAGTGCGACGCCCACTACTCCAAGTGCGTCGGCTACAACCCCTTCGGCCCGGACGGCGTCGTCGTC AAGGCCAAGTTCTGCCACCCCGGCGCCGAGGGCTTCCACCCGGGCGGCGCCCACCCGGGCGGCGAGATCGTCATC TGCCCCGGTGAGGGCTGCAAGGAGGGGCCCGGCGGCAAGTACCCCGTCGGCCCCGGCGGACCCGGCGGTCCTGGC TACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCCCCGGCGAGGGCTGCAAGGAGGGTCACGGCGGC CCTGGCGCTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCTCCGGTGAG GGCTGCAAGGAGGGCCACGGCGGCCCTGGCGGTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGC GCTCCTGGCGGCCCCGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGTCCCGGTGAGGGCTGC AAGGAGGGCCCCGGGGCCAAGTATCCCGTCGGCCCCGGCGCTCCCGGCGCTCCCGGCAACGGCTACCCCGGCGGC CCCGGCGAGAACTGCCCCGGAGGGACCCGGCGCCCCCGGCTACCCCGGCGGTGA |
Transcript | >Hirsu2|389 ATGAAGTACGCTTTCACCGCCGCTGCCCTCGTTGGCTTCGTCCTCGCCAACCCCATCGTCGCCGACGAGTGCTCG ACCGGGTGCGAGAAGGCCTTCGACGAGTGCCGCGGCCAGCCGCACGCGCTCCTGCCCGAGTGCGAGTCCAAGCAC CACGGCTGCCTCGACGGCTGCCACGGCGGCAAGGGCCCGGAGCCGCAGCCGGAGCCGCACTACGGCGGCGGCGAG GCCGACGAGGTCCACTGCGCCTGCGCCCGCGCCTGCAACGAGGCCTACGACGCCTGCTGCGGCAAGGAGGGCGCC CAGCGCGCCGAGTGCGACGCCCACTACTCCAAGTGCGTCGGCTACAACCCCTTCGGCCCGGACGGCGTCGTCGTC AAGGCCAAGTTCTGCCACCCCGGCGCCGAGGGCTTCCACCCGGGCGGCGCCCACCCGGGCGGCGAGATCGTCATC TGCCCCGGTGAGGGCTGCAAGGAGGGGCCCGGCGGCAAGTACCCCGTCGGCCCCGGCGGACCCGGCGGTCCTGGC TACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCCCCGGCGAGGGCTGCAAGGAGGGTCACGGCGGC CCTGGCGCTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCTCCGGTGAG GGCTGCAAGGAGGGCCACGGCGGCCCTGGCGGTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGC GCTCCTGGCGGCCCCGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGTCCCGGTGAGGGCTGC AAGGAGGGCCCCGGGGCCAAGTATCCCGTCGGCCCCGGCGCTCCCGGCGCTCCCGGCAACGGCTACCCCGGCGGC CCCGGCGAGAACTGCCCCGGAGGGACCCGGCGCCCCCGGCTACCCCGGCGGTGA |
Gene | >Hirsu2|389 ATGAAGTACGCTTTCACCGCCGCTGCCCTCGTTGGCTTCGTCCTCGCCAACCCCATCGTCGCCGACGAGTGCTCG ACCGGGTGCGAGAAGGCCTTCGACGAGTGCCGCGGCCAGCCGCACGCGCTCCTGCCCGAGTGCGAGTCCAAGCAC CACGGCTGCCTCGACGGCTGCCACGGCGGCAAGGGCCCGGAGCCGCAGCCGGAGCCGCACTACGGCGGCGGCGAG GCCGACGAGGTCCACTGCGCCTGCGCCCGCGCCTGCAACGAGGCCTACGACGCCTGCTGCGGCAAGGAGGGCGCC CAGCGCGCCGAGTGCGACGCCCACTACTCCAAGTGCGTCGGCTACAACCCCTTCGGCCCGGACGGCGTCGTCGTC AAGGCCAAGTTCTGCCACCCCGGCGCCGAGGGCTTCCACCCGGGCGGCGCCCACCCGGGCGGCGAGATCGTCATC TGCCCCGGTGAGGGCTGCAAGGAGGGGCCCGGCGGCAAGTACCCCGTCGGCCCCGGCGGACCCGGCGGTCCTGGC TACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCCCCGGCGAGGGCTGCAAGGAGGGTCACGGCGGC CCTGGCGCTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCTCCGGTGAG GGCTGCAAGGAGGGCCACGGCGGCCCTGGCGGTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGC GCTCCTGGCGGCCCCGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGTCCCGGTGAGGGCTGC AAGGAGGGCCCCGGGGCCAAGTATCCCGTCGGCCCCGGCGCTCCCGGCGCTCCCGGCAACGGCTACCCCGGCGGC CCCGGCGAGAACTGCCCCGGTGAAGGCTGCAAAGAAGGACACGGCGGTCCCGGCAAGGAGGGGCCGGGCGGCCCT GGCTACCCCGGCGGCGAGGCTCCCGGCAAGGAGGGACCCGGCGCCCCCGGCTACCCCGGCGGTGA |