Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|389
Gene name
LocationContig_1075:8101..9141
Strand+
Gene length (bp)1040
Transcript length (bp)954
Coding sequence length (bp)954
Protein length (aa) 318

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P06914|CSP_PLAYO Circumsporozoite protein OS=Plasmodium yoelii yoelii PE=1 SV=1 150 264 6.0E-08
sp|P06914|CSP_PLAYO Circumsporozoite protein OS=Plasmodium yoelii yoelii PE=1 SV=1 188 294 9.0E-07
sp|Q8CQD9|PLS_STAES Accumulation-associated protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0175 PE=3 SV=1 165 315 4.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|389
MKYAFTAAALVGFVLANPIVADECSTGCEKAFDECRGQPHALLPECESKHHGCLDGCHGGKGPEPQPEPHYGGGE
ADEVHCACARACNEAYDACCGKEGAQRAECDAHYSKCVGYNPFGPDGVVVKAKFCHPGAEGFHPGGAHPGGEIVI
CPGEGCKEGPGGKYPVGPGGPGGPGYPGHPGGPGEVVICPGEGCKEGHGGPGAPGGPGYPGHPGGPGEVVICSGE
GCKEGHGGPGGPGGPGYPGHPGGPGAPGGPGYPGHPGGPGEVVICPGEGCKEGPGAKYPVGPGAPGAPGNGYPGG
PGENCPGGTRRPRLPRR*
Coding >Hirsu2|389
ATGAAGTACGCTTTCACCGCCGCTGCCCTCGTTGGCTTCGTCCTCGCCAACCCCATCGTCGCCGACGAGTGCTCG
ACCGGGTGCGAGAAGGCCTTCGACGAGTGCCGCGGCCAGCCGCACGCGCTCCTGCCCGAGTGCGAGTCCAAGCAC
CACGGCTGCCTCGACGGCTGCCACGGCGGCAAGGGCCCGGAGCCGCAGCCGGAGCCGCACTACGGCGGCGGCGAG
GCCGACGAGGTCCACTGCGCCTGCGCCCGCGCCTGCAACGAGGCCTACGACGCCTGCTGCGGCAAGGAGGGCGCC
CAGCGCGCCGAGTGCGACGCCCACTACTCCAAGTGCGTCGGCTACAACCCCTTCGGCCCGGACGGCGTCGTCGTC
AAGGCCAAGTTCTGCCACCCCGGCGCCGAGGGCTTCCACCCGGGCGGCGCCCACCCGGGCGGCGAGATCGTCATC
TGCCCCGGTGAGGGCTGCAAGGAGGGGCCCGGCGGCAAGTACCCCGTCGGCCCCGGCGGACCCGGCGGTCCTGGC
TACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCCCCGGCGAGGGCTGCAAGGAGGGTCACGGCGGC
CCTGGCGCTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCTCCGGTGAG
GGCTGCAAGGAGGGCCACGGCGGCCCTGGCGGTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGC
GCTCCTGGCGGCCCCGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGTCCCGGTGAGGGCTGC
AAGGAGGGCCCCGGGGCCAAGTATCCCGTCGGCCCCGGCGCTCCCGGCGCTCCCGGCAACGGCTACCCCGGCGGC
CCCGGCGAGAACTGCCCCGGAGGGACCCGGCGCCCCCGGCTACCCCGGCGGTGA
Transcript >Hirsu2|389
ATGAAGTACGCTTTCACCGCCGCTGCCCTCGTTGGCTTCGTCCTCGCCAACCCCATCGTCGCCGACGAGTGCTCG
ACCGGGTGCGAGAAGGCCTTCGACGAGTGCCGCGGCCAGCCGCACGCGCTCCTGCCCGAGTGCGAGTCCAAGCAC
CACGGCTGCCTCGACGGCTGCCACGGCGGCAAGGGCCCGGAGCCGCAGCCGGAGCCGCACTACGGCGGCGGCGAG
GCCGACGAGGTCCACTGCGCCTGCGCCCGCGCCTGCAACGAGGCCTACGACGCCTGCTGCGGCAAGGAGGGCGCC
CAGCGCGCCGAGTGCGACGCCCACTACTCCAAGTGCGTCGGCTACAACCCCTTCGGCCCGGACGGCGTCGTCGTC
AAGGCCAAGTTCTGCCACCCCGGCGCCGAGGGCTTCCACCCGGGCGGCGCCCACCCGGGCGGCGAGATCGTCATC
TGCCCCGGTGAGGGCTGCAAGGAGGGGCCCGGCGGCAAGTACCCCGTCGGCCCCGGCGGACCCGGCGGTCCTGGC
TACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCCCCGGCGAGGGCTGCAAGGAGGGTCACGGCGGC
CCTGGCGCTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCTCCGGTGAG
GGCTGCAAGGAGGGCCACGGCGGCCCTGGCGGTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGC
GCTCCTGGCGGCCCCGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGTCCCGGTGAGGGCTGC
AAGGAGGGCCCCGGGGCCAAGTATCCCGTCGGCCCCGGCGCTCCCGGCGCTCCCGGCAACGGCTACCCCGGCGGC
CCCGGCGAGAACTGCCCCGGAGGGACCCGGCGCCCCCGGCTACCCCGGCGGTGA
Gene >Hirsu2|389
ATGAAGTACGCTTTCACCGCCGCTGCCCTCGTTGGCTTCGTCCTCGCCAACCCCATCGTCGCCGACGAGTGCTCG
ACCGGGTGCGAGAAGGCCTTCGACGAGTGCCGCGGCCAGCCGCACGCGCTCCTGCCCGAGTGCGAGTCCAAGCAC
CACGGCTGCCTCGACGGCTGCCACGGCGGCAAGGGCCCGGAGCCGCAGCCGGAGCCGCACTACGGCGGCGGCGAG
GCCGACGAGGTCCACTGCGCCTGCGCCCGCGCCTGCAACGAGGCCTACGACGCCTGCTGCGGCAAGGAGGGCGCC
CAGCGCGCCGAGTGCGACGCCCACTACTCCAAGTGCGTCGGCTACAACCCCTTCGGCCCGGACGGCGTCGTCGTC
AAGGCCAAGTTCTGCCACCCCGGCGCCGAGGGCTTCCACCCGGGCGGCGCCCACCCGGGCGGCGAGATCGTCATC
TGCCCCGGTGAGGGCTGCAAGGAGGGGCCCGGCGGCAAGTACCCCGTCGGCCCCGGCGGACCCGGCGGTCCTGGC
TACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCCCCGGCGAGGGCTGCAAGGAGGGTCACGGCGGC
CCTGGCGCTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGCTCCGGTGAG
GGCTGCAAGGAGGGCCACGGCGGCCCTGGCGGTCCCGGCGGCCCTGGCTACCCCGGCCACCCCGGCGGCCCCGGC
GCTCCTGGCGGCCCCGGCTACCCCGGCCACCCCGGCGGCCCCGGCGAGGTTGTCATCTGTCCCGGTGAGGGCTGC
AAGGAGGGCCCCGGGGCCAAGTATCCCGTCGGCCCCGGCGCTCCCGGCGCTCCCGGCAACGGCTACCCCGGCGGC
CCCGGCGAGAACTGCCCCGGTGAAGGCTGCAAAGAAGGACACGGCGGTCCCGGCAAGGAGGGGCCGGGCGGCCCT
GGCTACCCCGGCGGCGAGGCTCCCGGCAAGGAGGGACCCGGCGCCCCCGGCTACCCCGGCGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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