Protein ID | Hirsu2|3887 |
Gene name | |
Location | Contig_2044:798..3383 |
Strand | - |
Gene length (bp) | 2585 |
Transcript length (bp) | 2400 |
Coding sequence length (bp) | 2400 |
Protein length (aa) | 800 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11885 | DUF3405 | Protein of unknown function (DUF3405) | 5.8E-207 | 279 | 793 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 54 | 76 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3887 MGRATSLLSLSSRSSSRASEHRNQDALLPCLEKQPDKPGIRIRSLLGHNLYRRVLKWTLACLALLVLLFFLATDV SAPEMVQMGKARLAGHTLQPPKPAAHGPADGSDPTPDLTDADVSVVVQDAAPDAPDAPDADHDADEGDPRQDEAG KDDKAATSMTEQEKAEQDDLLRKMPWLIFKHLDGYFHGLKALVASTDLVPEYPNTSQSAPLPAPPLTDGVPKPEP YNPYSPSDDIRPCYLDRDNKVPAPAMYAYRGVPQHMPDPVLGSYDLFGIRDDVCFDRFGRYGPYGLGYSKLRGGV GVGAETESSGSHEVWAETGQINFNQVDWGQAQERCFAANRHRFVEPDRITQELPTSLEKRAGKKSRMAVVVRCYQ GFKWTELAILNFRAMVTELSLKAGGEYTVHLLLHVHDTDEPIWADDVTVQRILDANVPAEFHNLVTLWSEPQMRL FYPGDFGETLENESGSDIHGVYRSAHMPLQVFAMQHPEYEHVWNWEMDMRALGNYYELFDRIGRWAESQPRSLLW ERNARYYIPSHHGGWANFSEAVRLDVVRSGEQPILGPVDFKGRKPLRREERGESVLPDNCGASHGAAECGVGEAA DIITLNPIFDTFQSGWVFSNDVTGYDDTTLRHPPRRCAIVTASRLSRRLLTAMHEETWRHHHSMFSEMFPPTMAL HHGLKAVYAPHPTYLDRAWQPLGSAVDAAFNSGKHHSASGRNSPYDLRNEHNHKGTTWYFHSEFAGLLWRRWLGY AQMDGRGNRGNSGTKRGGVKEESRPDSSGRLCLRSMLLHPIKHEHPSES* |
Coding | >Hirsu2|3887 ATGGGGCGTGCCACGTCGCTCCTGAGCCTGAGCAGCCGCTCGAGCTCCCGCGCCTCGGAGCATCGCAACCAAGAC GCCCTGCTGCCCTGCCTCGAGAAGCAGCCGGACAAGCCCGGCATCCGCATCCGCTCCCTGCTCGGCCACAACCTC TACCGCCGCGTCCTCAAGTGGACCCTCGCCTGCCTGGCCCTCCTCGTCCTCCTCTTCTTCCTCGCCACCGATGTC TCCGCCCCGGAGATGGTGCAGATGGGCAAGGCCCGCCTCGCCGGCCACACCCTCCAGCCGCCCAAGCCCGCCGCC CACGGGCCCGCCGACGGCTCTGACCCGACGCCCGACCTGACCGACGCCGACGTGTCCGTCGTCGTTCAGGACGCC GCCCCCGACGCCCCCGACGCCCCCGACGCCGACCACGACGCCGACGAAGGGGATCCGCGGCAGGACGAGGCCGGC AAGGACGACAAGGCGGCCACGTCCATGACCGAGCAGGAAAAGGCTGAGCAAGACGACCTCCTCAGGAAGATGCCC TGGCTCATCTTCAAACATCTCGACGGCTACTTCCACGGCCTCAAGGCCCTGGTTGCCTCGACTGACCTGGTGCCC GAATACCCCAACACGTCCCAGTCGGCGCCCCTGCCGGCGCCCCCGCTCACCGACGGCGTCCCCAAGCCGGAGCCC TACAACCCGTACTCGCCCTCGGACGACATCCGCCCGTGCTACCTCGACCGCGACAACAAGGTGCCCGCCCCCGCC ATGTACGCGTACCGCGGCGTCCCCCAGCACATGCCCGACCCCGTCCTCGGCTCCTACGACCTGTTCGGCATCCGC GACGACGTCTGCTTCGACCGCTTCGGCCGCTACGGCCCGTACGGCCTCGGCTACTCGAAGCTGCGCGGCGGCGTC GGCGTCGGCGCCGAGACGGAGAGCTCGGGCAGCCACGAGGTCTGGGCCGAGACGGGCCAGATCAACTTCAACCAG GTCGACTGGGGCCAGGCCCAGGAGCGCTGCTTCGCCGCCAACCGCCACCGCTTCGTCGAGCCCGACCGCATCACC CAGGAGCTGCCGACGTCGCTCGAGAAGCGGGCCGGCAAGAAGAGCCGGATGGCGGTCGTGGTCCGCTGCTACCAG GGCTTCAAGTGGACCGAGCTGGCCATCCTCAACTTCCGCGCCATGGTGACGGAGCTGTCGCTCAAGGCCGGCGGC GAGTACACGGTCCACCTGCTGCTGCACGTCCACGACACGGACGAGCCCATCTGGGCCGACGACGTGACGGTGCAG CGGATCCTCGACGCCAACGTGCCCGCCGAGTTCCACAACCTGGTGACGCTCTGGAGCGAGCCGCAGATGCGCCTC TTCTACCCCGGCGACTTCGGCGAGACGCTCGAGAACGAGAGCGGCTCCGACATCCACGGCGTCTACCGCAGCGCC CACATGCCGCTGCAGGTCTTCGCCATGCAGCACCCGGAGTACGAGCACGTCTGGAACTGGGAGATGGACATGCGC GCCCTCGGCAACTACTACGAGCTCTTCGACCGCATCGGCCGCTGGGCCGAGAGCCAGCCGCGGTCGCTGCTGTGG GAGCGCAACGCGCGCTACTACATTCCCAGCCACCACGGCGGCTGGGCCAACTTCTCGGAGGCGGTCCGGCTCGAC GTGGTGCGCTCGGGCGAGCAGCCCATCCTCGGGCCCGTCGACTTCAAGGGCCGCAAGCCGCTGCGGCGCGAGGAG CGCGGCGAGTCGGTGCTGCCGGACAACTGCGGCGCCAGCCACGGCGCGGCCGAGTGCGGCGTCGGCGAGGCGGCC GACATCATCACGCTCAACCCCATCTTCGACACGTTCCAGTCGGGCTGGGTCTTCTCCAACGACGTGACGGGCTAC GACGACACGACGCTGCGGCACCCGCCGCGCCGCTGCGCCATCGTGACGGCCTCGCGGCTGAGCCGCCGGCTGCTG ACGGCCATGCACGAGGAGACGTGGCGGCACCACCACAGCATGTTCTCGGAGATGTTCCCGCCCACGATGGCGCTG CACCACGGCCTCAAGGCCGTCTACGCGCCGCACCCGACGTACCTGGACCGCGCCTGGCAGCCGCTGGGCTCGGCC GTCGACGCCGCCTTCAACAGCGGCAAGCACCACTCGGCCTCGGGCCGCAACTCGCCCTACGACCTGCGCAACGAG CACAACCACAAGGGCACCACCTGGTACTTCCACAGCGAGTTCGCCGGCCTGCTGTGGCGGCGCTGGCTGGGCTAC GCCCAGATGGACGGCCGCGGCAACCGCGGCAACTCGGGCACCAAGCGCGGCGGCGTCAAGGAGGAGAGCCGGCCG GACAGCAGCGGGCGGCTGTGCCTGCGGAGCATGCTGCTGCACCCCATCAAGCACGAGCATCCGTCGGAGTCGTAG |
Transcript | >Hirsu2|3887 ATGGGGCGTGCCACGTCGCTCCTGAGCCTGAGCAGCCGCTCGAGCTCCCGCGCCTCGGAGCATCGCAACCAAGAC GCCCTGCTGCCCTGCCTCGAGAAGCAGCCGGACAAGCCCGGCATCCGCATCCGCTCCCTGCTCGGCCACAACCTC TACCGCCGCGTCCTCAAGTGGACCCTCGCCTGCCTGGCCCTCCTCGTCCTCCTCTTCTTCCTCGCCACCGATGTC TCCGCCCCGGAGATGGTGCAGATGGGCAAGGCCCGCCTCGCCGGCCACACCCTCCAGCCGCCCAAGCCCGCCGCC CACGGGCCCGCCGACGGCTCTGACCCGACGCCCGACCTGACCGACGCCGACGTGTCCGTCGTCGTTCAGGACGCC GCCCCCGACGCCCCCGACGCCCCCGACGCCGACCACGACGCCGACGAAGGGGATCCGCGGCAGGACGAGGCCGGC AAGGACGACAAGGCGGCCACGTCCATGACCGAGCAGGAAAAGGCTGAGCAAGACGACCTCCTCAGGAAGATGCCC TGGCTCATCTTCAAACATCTCGACGGCTACTTCCACGGCCTCAAGGCCCTGGTTGCCTCGACTGACCTGGTGCCC GAATACCCCAACACGTCCCAGTCGGCGCCCCTGCCGGCGCCCCCGCTCACCGACGGCGTCCCCAAGCCGGAGCCC TACAACCCGTACTCGCCCTCGGACGACATCCGCCCGTGCTACCTCGACCGCGACAACAAGGTGCCCGCCCCCGCC ATGTACGCGTACCGCGGCGTCCCCCAGCACATGCCCGACCCCGTCCTCGGCTCCTACGACCTGTTCGGCATCCGC GACGACGTCTGCTTCGACCGCTTCGGCCGCTACGGCCCGTACGGCCTCGGCTACTCGAAGCTGCGCGGCGGCGTC GGCGTCGGCGCCGAGACGGAGAGCTCGGGCAGCCACGAGGTCTGGGCCGAGACGGGCCAGATCAACTTCAACCAG GTCGACTGGGGCCAGGCCCAGGAGCGCTGCTTCGCCGCCAACCGCCACCGCTTCGTCGAGCCCGACCGCATCACC CAGGAGCTGCCGACGTCGCTCGAGAAGCGGGCCGGCAAGAAGAGCCGGATGGCGGTCGTGGTCCGCTGCTACCAG GGCTTCAAGTGGACCGAGCTGGCCATCCTCAACTTCCGCGCCATGGTGACGGAGCTGTCGCTCAAGGCCGGCGGC GAGTACACGGTCCACCTGCTGCTGCACGTCCACGACACGGACGAGCCCATCTGGGCCGACGACGTGACGGTGCAG CGGATCCTCGACGCCAACGTGCCCGCCGAGTTCCACAACCTGGTGACGCTCTGGAGCGAGCCGCAGATGCGCCTC TTCTACCCCGGCGACTTCGGCGAGACGCTCGAGAACGAGAGCGGCTCCGACATCCACGGCGTCTACCGCAGCGCC CACATGCCGCTGCAGGTCTTCGCCATGCAGCACCCGGAGTACGAGCACGTCTGGAACTGGGAGATGGACATGCGC GCCCTCGGCAACTACTACGAGCTCTTCGACCGCATCGGCCGCTGGGCCGAGAGCCAGCCGCGGTCGCTGCTGTGG GAGCGCAACGCGCGCTACTACATTCCCAGCCACCACGGCGGCTGGGCCAACTTCTCGGAGGCGGTCCGGCTCGAC GTGGTGCGCTCGGGCGAGCAGCCCATCCTCGGGCCCGTCGACTTCAAGGGCCGCAAGCCGCTGCGGCGCGAGGAG CGCGGCGAGTCGGTGCTGCCGGACAACTGCGGCGCCAGCCACGGCGCGGCCGAGTGCGGCGTCGGCGAGGCGGCC GACATCATCACGCTCAACCCCATCTTCGACACGTTCCAGTCGGGCTGGGTCTTCTCCAACGACGTGACGGGCTAC GACGACACGACGCTGCGGCACCCGCCGCGCCGCTGCGCCATCGTGACGGCCTCGCGGCTGAGCCGCCGGCTGCTG ACGGCCATGCACGAGGAGACGTGGCGGCACCACCACAGCATGTTCTCGGAGATGTTCCCGCCCACGATGGCGCTG CACCACGGCCTCAAGGCCGTCTACGCGCCGCACCCGACGTACCTGGACCGCGCCTGGCAGCCGCTGGGCTCGGCC GTCGACGCCGCCTTCAACAGCGGCAAGCACCACTCGGCCTCGGGCCGCAACTCGCCCTACGACCTGCGCAACGAG CACAACCACAAGGGCACCACCTGGTACTTCCACAGCGAGTTCGCCGGCCTGCTGTGGCGGCGCTGGCTGGGCTAC GCCCAGATGGACGGCCGCGGCAACCGCGGCAACTCGGGCACCAAGCGCGGCGGCGTCAAGGAGGAGAGCCGGCCG GACAGCAGCGGGCGGCTGTGCCTGCGGAGCATGCTGCTGCACCCCATCAAGCACGAGCATCCGTCGGAGTCGTAG |
Gene | >Hirsu2|3887 ATGGGGCGTGCCACGTCGCTCCTGAGCCTGAGCAGCCGCTCGAGCTCCCGCGCCTCGGAGCATCGCAACCAAGAC GCCCTGCTGCCCTGCCTCGAGAAGCAGCCGGACAAGCCCGGCATCCGCATCCGCTCCCTGCTCGGCCACAACCTC TACCGCCGCGTCCTCAAGTGGACCCTCGCCTGCCTGGCCCTCCTCGTCCTCCTCTTCTTCCTCGCCACCGATGTC TCCGCCCCGGAGATGGTGCAGATGGGCAAGGCCCGCCTCGCCGGCCACACCCTCCAGCCGCCCAAGCCCGCCGCC CACGGGCCCGCCGACGGCTCTGACCCGACGCCCGACCTGACCGACGCCGACGTGTCCGTCGTCGTTCAGGACGCC GCCCCCGACGCCCCCGACGCCCCCGACGCCGACCACGACGCCGACGAAGGGGATCCGCGGCAGGACGAGGCCGGC AAGGACGACAAGGCGGCCACGTCCATGACCGAGCAGGAAAAGGCTGAGCAAGACGACCTCCTCAGGAAGATGCCC TGGCTCATCTTCAAACAGTATGGCCTCCCCCCCTCTGCCCTTTTTGCTCCCCTCCATGCGCCTCTTCCTTTTCCT CCACGGCCCCCCCCCTCCCCTGGCAGGGAAGAAGCCGTGTCATCACGCGCGCCACGACTGATCGGAATCCGTCCC CGTTGCTGACCGTGTCTCTTCTTTCCTTTTTCCCCTCTCGTCTCTGGCGCAGTCTCGACGGCTACTTCCACGGCC TCAAGGCCCTGGTTGCCTCGACTGACCTGGTGCCCGAATACCCCAACACGTCCCAGTCGGCGCCCCTGCCGGCGC CCCCGCTCACCGACGGCGTCCCCAAGCCGGAGCCCTACAACCCGTACTCGCCCTCGGACGACATCCGCCCGTGCT ACCTCGACCGCGACAACAAGGTGCCCGCCCCCGCCATGTACGCGTACCGCGGCGTCCCCCAGCACATGCCCGACC CCGTCCTCGGCTCCTACGACCTGTTCGGCATCCGCGACGACGTCTGCTTCGACCGCTTCGGCCGCTACGGCCCGT ACGGCCTCGGCTACTCGAAGCTGCGCGGCGGCGTCGGCGTCGGCGCCGAGACGGAGAGCTCGGGCAGCCACGAGG TCTGGGCCGAGACGGGCCAGATCAACTTCAACCAGGTCGACTGGGGCCAGGCCCAGGAGCGCTGCTTCGCCGCCA ACCGCCACCGCTTCGTCGAGCCCGACCGCATCACCCAGGAGCTGCCGACGTCGCTCGAGAAGCGGGCCGGCAAGA AGAGCCGGATGGCGGTCGTGGTCCGCTGCTACCAGGGCTTCAAGTGGACCGAGCTGGCCATCCTCAACTTCCGCG CCATGGTGACGGAGCTGTCGCTCAAGGCCGGCGGCGAGTACACGGTCCACCTGCTGCTGCACGTCCACGACACGG ACGAGCCCATCTGGGCCGACGACGTGACGGTGCAGCGGATCCTCGACGCCAACGTGCCCGCCGAGTTCCACAACC TGGTGACGCTCTGGAGCGAGCCGCAGATGCGCCTCTTCTACCCCGGCGACTTCGGCGAGACGCTCGAGAACGAGA GCGGCTCCGACATCCACGGCGTCTACCGCAGCGCCCACATGCCGCTGCAGGTCTTCGCCATGCAGCACCCGGAGT ACGAGCACGTCTGGAACTGGGAGATGGACATGCGCGCCCTCGGCAACTACTACGAGCTCTTCGACCGCATCGGCC GCTGGGCCGAGAGCCAGCCGCGGTCGCTGCTGTGGGAGCGCAACGCGCGCTACTACATTCCCAGCCACCACGGCG GCTGGGCCAACTTCTCGGAGGCGGTCCGGCTCGACGTGGTGCGCTCGGGCGAGCAGCCCATCCTCGGGCCCGTCG ACTTCAAGGGCCGCAAGCCGCTGCGGCGCGAGGAGCGCGGCGAGTCGGTGCTGCCGGACAACTGCGGCGCCAGCC ACGGCGCGGCCGAGTGCGGCGTCGGCGAGGCGGCCGACATCATCACGCTCAACCCCATCTTCGACACGTTCCAGT CGGGCTGGGTCTTCTCCAACGACGTGACGGGCTACGACGACACGACGCTGCGGCACCCGCCGCGCCGCTGCGCCA TCGTGACGGCCTCGCGGCTGAGCCGCCGGCTGCTGACGGCCATGCACGAGGAGACGTGGCGGCACCACCACAGCA TGTTCTCGGAGATGTTCCCGCCCACGATGGCGCTGCACCACGGCCTCAAGGCCGTCTACGCGCCGCACCCGACGT ACCTGGACCGCGCCTGGCAGCCGCTGGGCTCGGCCGTCGACGCCGCCTTCAACAGCGGCAAGCACCACTCGGCCT CGGGCCGCAACTCGCCCTACGACCTGCGCAACGAGCACAACCACAAGGGCACCACCTGGTACTTCCACAGCGAGT TCGCCGGCCTGCTGTGGCGGCGCTGGCTGGGCTACGCCCAGATGGACGGCCGCGGCAACCGCGGCAACTCGGGCA CCAAGCGCGGCGGCGTCAAGGAGGAGAGCCGGCCGGACAGCAGCGGGCGGCTGTGCCTGCGGAGCATGCTGCTGC ACCCCATCAAGCACGAGCATCCGTCGGAGTCGTAG |