Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3878
Gene name
LocationContig_204:21692..22654
Strand-
Gene length (bp)962
Transcript length (bp)900
Coding sequence length (bp)900
Protein length (aa) 300

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 28 50 22
2 76 98 22
3 113 135 22
4 142 164 22
5 174 196 22
6 217 239 22
7 249 266 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3878
MERLYASGCIRYPSHAQEYCFLLTRIATFAGSQLLCLLTVVCALLNQFVFTHARLCRIYGPRFAELGHADRRRLR
LLHVGIVMKLSAFLFVAVPAYHVAARGSAWADTCVAGMTMSDMATVAVFSFGALCLFDFIYDDNLRVIYIMHHVG
TLVVMQGTLALVMTLPARDMDGAGIIRMVQVMEITLAWVLFSSLGSTVSRLTYLTRQLLPQGLTGLRCVYLGGLC
AYTSLVAIEGVTVICLLRIKWSRLPNSVGMGMCLFQVLFTATKMKTAQRILAVYRNEAETARGQPKLILTAKKF*
Coding >Hirsu2|3878
ATGGAGAGACTCTATGCATCCGGCTGCATTCGATACCCCTCCCATGCGCAGGAATACTGTTTCCTGCTGACCCGG
ATAGCTACCTTTGCCGGCTCCCAGCTCCTCTGCCTTCTCACCGTCGTCTGCGCCCTCTTGAACCAGTTCGTCTTC
ACCCATGCCCGCCTGTGCCGCATCTATGGGCCGCGATTCGCCGAACTCGGCCATGCCGACCGTCGGCGCCTACGC
CTCCTTCACGTCGGCATCGTCATGAAGCTGTCGGCATTCCTTTTCGTCGCCGTGCCGGCATACCACGTCGCGGCC
CGGGGTAGCGCCTGGGCCGACACCTGTGTCGCGGGCATGACCATGTCGGACATGGCCACCGTGGCCGTCTTCTCG
TTTGGAGCGTTGTGTCTCTTCGACTTCATCTACGACGACAACCTGCGTGTCATCTATATCATGCATCATGTCGGC
ACCCTCGTCGTGATGCAAGGGACTTTGGCCTTGGTCATGACTCTGCCAGCCAGGGACATGGACGGAGCTGGAATC
ATACGCATGGTTCAGGTCATGGAGATAACGCTGGCGTGGGTCTTGTTTTCCAGCCTGGGCAGCACCGTTTCACGC
CTGACCTACCTCACCCGACAGCTACTCCCACAGGGGCTCACGGGACTGCGCTGTGTCTATCTCGGCGGTCTCTGC
GCTTACACGTCCCTGGTAGCCATCGAAGGAGTGACGGTCATCTGTCTGCTCCGTATCAAGTGGAGCCGCCTTCCG
AACAGCGTCGGAATGGGCATGTGTCTGTTTCAAGTCTTGTTCACGGCTACCAAGATGAAGACCGCCCAGCGCATC
CTGGCCGTGTATCGGAATGAAGCGGAGACGGCCCGCGGGCAACCGAAGCTTATACTAACGGCCAAAAAGTTCTAG
Transcript >Hirsu2|3878
ATGGAGAGACTCTATGCATCCGGCTGCATTCGATACCCCTCCCATGCGCAGGAATACTGTTTCCTGCTGACCCGG
ATAGCTACCTTTGCCGGCTCCCAGCTCCTCTGCCTTCTCACCGTCGTCTGCGCCCTCTTGAACCAGTTCGTCTTC
ACCCATGCCCGCCTGTGCCGCATCTATGGGCCGCGATTCGCCGAACTCGGCCATGCCGACCGTCGGCGCCTACGC
CTCCTTCACGTCGGCATCGTCATGAAGCTGTCGGCATTCCTTTTCGTCGCCGTGCCGGCATACCACGTCGCGGCC
CGGGGTAGCGCCTGGGCCGACACCTGTGTCGCGGGCATGACCATGTCGGACATGGCCACCGTGGCCGTCTTCTCG
TTTGGAGCGTTGTGTCTCTTCGACTTCATCTACGACGACAACCTGCGTGTCATCTATATCATGCATCATGTCGGC
ACCCTCGTCGTGATGCAAGGGACTTTGGCCTTGGTCATGACTCTGCCAGCCAGGGACATGGACGGAGCTGGAATC
ATACGCATGGTTCAGGTCATGGAGATAACGCTGGCGTGGGTCTTGTTTTCCAGCCTGGGCAGCACCGTTTCACGC
CTGACCTACCTCACCCGACAGCTACTCCCACAGGGGCTCACGGGACTGCGCTGTGTCTATCTCGGCGGTCTCTGC
GCTTACACGTCCCTGGTAGCCATCGAAGGAGTGACGGTCATCTGTCTGCTCCGTATCAAGTGGAGCCGCCTTCCG
AACAGCGTCGGAATGGGCATGTGTCTGTTTCAAGTCTTGTTCACGGCTACCAAGATGAAGACCGCCCAGCGCATC
CTGGCCGTGTATCGGAATGAAGCGGAGACGGCCCGCGGGCAACCGAAGCTTATACTAACGGCCAAAAAGTTCTAG
Gene >Hirsu2|3878
ATGGAGAGACTCTATGCATCCGGCTGCATTCGATACCCCTCCCATGCGCAGGAATACTGTTTCCTGCTGACCCGG
ATAGCTACCTTTGCCGGCTCCCAGCTCCTCTGCCTTCTCACCGTCGTCTGCGCCCTCTTGAACCAGTTCGTCTTC
ACCCATGCCCGCCTGTGCCGCATCTATGGGCCGCGATTCGCCGAACTCGGCCATGCCGACCGTCGGCGCCTACGC
CTCCTTCACGTCGGCATCGTCATGAAGCTGTCGGCATTCCTTTTCGTCGCCGTGCCGGCATACCACGTCGCGGCC
CGGGGTAGCGCCTGGGCCGACACCTGTGTCGCGGGCATGACCATGTCGGACATGGCCACCGTGGCCGTCTTCTCG
TTTGGAGCGTTGTGTCTCTTCGACTTCATCTACGACGACAACCTGCGTGTCATCTATATCATGCATCATGTCGGC
ACCCTCGTCGTGATGCAAGGGACTTTGGCCTTGGTCATGACTCTGCCAGCCAGGGACATGGACGGAGCTGGAATC
ATACGCATGGTTCAGGTCATGGAGATAACGCTGGCGTGGGGTCAGTGTAGAACCATGTCGAGGCCTCTGACGACC
CTCATTGTGGGCGCTAACAACCAGCAGTCTTGTTTTCCAGCCTGGGCAGCACCGTTTCACGCCTGACCTACCTCA
CCCGACAGCTACTCCCACAGGGGCTCACGGGACTGCGCTGTGTCTATCTCGGCGGTCTCTGCGCTTACACGTCCC
TGGTAGCCATCGAAGGAGTGACGGTCATCTGTCTGCTCCGTATCAAGTGGAGCCGCCTTCCGAACAGCGTCGGAA
TGGGCATGTGTCTGTTTCAAGTCTTGTTCACGGCTACCAAGATGAAGACCGCCCAGCGCATCCTGGCCGTGTATC
GGAATGAAGCGGAGACGGCCCGCGGGCAACCGAAGCTTATACTAACGGCCAAAAAGTTCTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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