Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3864
Gene name
LocationContig_2038:2139..3204
Strand+
Gene length (bp)1065
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12588 PSDC Phophatidylserine decarboxylase 7.7E-46 107 237

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 29 0.45

Transmembrane Domains

Domain # Start End Length
1 12 31 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3864
MRFATASSGGRSSLLLLLLSGAFVAVSGLAAEQASSYAPRHRDDRPRYGAQEDLLRPKSPPMSDVLPDYTLIRNP
DAWRSQERRNYHDMIARMAKHVDRNPADKLTPALEELKILIETNPRIYMYFVQMFDEIPHRFPYNSDGVGKPVLR
DYRHMLQVLNHIVTRGPDVDTVGVPMVIILAYPMGTASGHAAFLDPTVNKAFKKVLREWGHFLLSPASCDVLGTS
DSGWFGKQKLHELEQAANAPYHTHKTFEQLFECDPSAESHGYKSWDGKSAAPGP*
Coding >Hirsu2|3864
ATGAGATTCGCAACCGCCTCTTCTGGCGGCCGAAGCAGCCTGCTGCTCCTGCTGCTCTCCGGCGCCTTTGTCGCC
GTCTCGGGCCTCGCCGCTGAGCAGGCGTCGTCTTACGCGCCTCGCCATCGTGATGACAGGCCCCGATATGGCGCC
CAGGAAGACCTTCTCCGTCCCAAGTCGCCGCCCATGTCGGATGTCCTGCCGGACTACACCCTCATCCGCAACCCC
GATGCGTGGCGGTCCCAAGAGCGGCGCAACTACCACGACATGATCGCGCGCATGGCCAAGCACGTCGACCGGAAC
CCGGCGGACAAGCTGACGCCGGCGCTGGAGGAGCTCAAGATCCTGATCGAGACGAACCCCCGTATATACATGTAC
TTTGTCCAGATGTTTGACGAGATCCCGCATCGCTTCCCGTACAATTCGGACGGGGTGGGCAAGCCCGTCCTCCGC
GACTATCGTCACATGCTGCAGGTCCTCAACCACATCGTCACCCGTGGCCCGGACGTGGACACGGTGGGCGTGCCG
ATGGTCATTATCCTGGCCTATCCGATGGGCACAGCGAGTGGCCACGCCGCGTTCCTCGACCCGACGGTGAACAAG
GCGTTCAAGAAGGTGCTCCGAGAATGGGGTCACTTCCTACTGTCTCCGGCCTCGTGCGACGTCCTCGGCACGAGC
GACTCCGGCTGGTTCGGCAAGCAGAAGCTGCACGAGCTCGAGCAGGCGGCCAACGCCCCGTACCACACGCACAAG
ACGTTTGAGCAGCTGTTCGAGTGCGACCCGTCGGCCGAGTCTCACGGGTACAAGTCCTGGGACGGTAAGTCTGCT
GCTCCTGGCCCGTAA
Transcript >Hirsu2|3864
ATGAGATTCGCAACCGCCTCTTCTGGCGGCCGAAGCAGCCTGCTGCTCCTGCTGCTCTCCGGCGCCTTTGTCGCC
GTCTCGGGCCTCGCCGCTGAGCAGGCGTCGTCTTACGCGCCTCGCCATCGTGATGACAGGCCCCGATATGGCGCC
CAGGAAGACCTTCTCCGTCCCAAGTCGCCGCCCATGTCGGATGTCCTGCCGGACTACACCCTCATCCGCAACCCC
GATGCGTGGCGGTCCCAAGAGCGGCGCAACTACCACGACATGATCGCGCGCATGGCCAAGCACGTCGACCGGAAC
CCGGCGGACAAGCTGACGCCGGCGCTGGAGGAGCTCAAGATCCTGATCGAGACGAACCCCCGTATATACATGTAC
TTTGTCCAGATGTTTGACGAGATCCCGCATCGCTTCCCGTACAATTCGGACGGGGTGGGCAAGCCCGTCCTCCGC
GACTATCGTCACATGCTGCAGGTCCTCAACCACATCGTCACCCGTGGCCCGGACGTGGACACGGTGGGCGTGCCG
ATGGTCATTATCCTGGCCTATCCGATGGGCACAGCGAGTGGCCACGCCGCGTTCCTCGACCCGACGGTGAACAAG
GCGTTCAAGAAGGTGCTCCGAGAATGGGGTCACTTCCTACTGTCTCCGGCCTCGTGCGACGTCCTCGGCACGAGC
GACTCCGGCTGGTTCGGCAAGCAGAAGCTGCACGAGCTCGAGCAGGCGGCCAACGCCCCGTACCACACGCACAAG
ACGTTTGAGCAGCTGTTCGAGTGCGACCCGTCGGCCGAGTCTCACGGGTACAAGTCCTGGGACGGTAAGTCTGCT
GCTCCTGGCCCGTAA
Gene >Hirsu2|3864
ATGAGATTCGCAACCGCCTCTTCTGGCGGCCGAAGCAGCCTGCTGCTCCTGCTGCTCTCCGGCGCCTTTGTCGCC
GTCTCGGGCCTCGCCGCTGAGCAGGCGTCGTCTTACGCGCCTCGCCATCGTGATGACAGGCCCCGATATGGCGCC
CAGGAAGACCTTCTCCGTCCCAAGTCGCCGCCCATGTCGGATGTCCTGCCGGACTACACCCTCATCCGCAAGTCA
GTCCTCCGCCCCCGGCACCCCGTGGATCGAGAGCGGTAGGCAGAGCAAAGGATGGTGAAAGGCTGATGGGAGTCG
TTTCCGCCTTGCCCAGCCCCGATGCGTGGCGGTCCCAAGAGCGGCGCAACTACCACGACATGATCGCGCGCATGG
CCAAGCACGTCGACCGGAACCCGGCGGACAAGCTGACGCCGGCGCTGGAGGAGCTCAAGATCCTGATCGAGACGA
ACCCCCGTATATACATGTACTTTGTCCAGATGTTTGACGAGATCCCGCATCGCTTCCCGTACAATTCGGACGGGG
TGGGCAAGCCCGTCCTCCGCGACTATCGTCACATGCTGCAGGTCCTCAACCACATCGTCACCCGTGGCCCGGACG
TGGACACGGTGGGCGTGCCGATGGTCATTATCCTGGCCTATCCGATGGGCACAGCGAGGTCGGTGCTCCCGTCTC
GCCTCGGAGGGGCCTAGCATCACCCAAGCACGAGAAAGGGAGCTGACTGGAGACGGCATCGCAGTGGCCACGCCG
CGTTCCTCGACCCGACGGTGAACAAGGCGTTCAAGAAGGTGCTCCGAGAATGGGGTCACTTCCTACTGGTATGCC
GTCTTGCTTCCGGGATAGGATTTATCTGATGCGCTTTGTCAGTCTCCGGCCTCGTGCGACGTCCTCGGCACGAGC
GACTCCGGCTGGTTCGGCAAGCAGAAGCTGCACGAGCTCGAGCAGGCGGCCAACGCCCCGTACCACACGCACAAG
ACGTTTGAGCAGCTGTTCGAGTGCGACCCGTCGGCCGAGTCTCACGGGTACAAGTCCTGGGACGGTAAGTCTGCT
GCTCCTGGCCCGTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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