Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3864
Gene name
LocationContig_2038:2139..3204
Strand+
Gene length (bp)1065
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12588 PSDC Phophatidylserine decarboxylase 4.4E-46 107 238

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1647 0.0642 0.8656 0.1265 0.086 0.054 0.4838 0.3794 0.3281 0.0079

SignalP

SignalP signal predicted Location Score
Yes 1 - 30 0.975612

Transmembrane Domains

Domain # Start End Length
1 12 31 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup309
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2710
Ophiocordyceps australis map64 (Brazil) OphauB2|5632
Ophiocordyceps australis map64 (Brazil) OphauB2|5656
Ophiocordyceps camponoti-floridani Ophcf2|00043
Ophiocordyceps camponoti-rufipedis Ophun1|6281
Ophiocordyceps kimflemingae Ophio5|2558
Ophiocordyceps subramaniannii Hirsu2|1125
Ophiocordyceps subramaniannii Hirsu2|3028
Ophiocordyceps subramaniannii Hirsu2|3864 (this protein)
Ophiocordyceps subramaniannii Hirsu2|989

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3864
MRFATASSGGRSSLLLLLLSGAFVAVSGLAAEQASSYAPRHRDDRPRYGAQEDLLRPKSPPMSDVLPDYTLIRNP
DAWRSQERRNYHDMIARMAKHVDRNPADKLTPALEELKILIETNPRIYMYFVQMFDEIPHRFPYNSDGVGKPVLR
DYRHMLQVLNHIVTRGPDVDTVGVPMVIILAYPMGTASGHAAFLDPTVNKAFKKVLREWGHFLLSPASCDVLGTS
DSGWFGKQKLHELEQAANAPYHTHKTFEQLFECDPSAESHGYKSWDGKSAAPGP*
Coding >Hirsu2|3864
ATGAGATTCGCAACCGCCTCTTCTGGCGGCCGAAGCAGCCTGCTGCTCCTGCTGCTCTCCGGCGCCTTTGTCGCC
GTCTCGGGCCTCGCCGCTGAGCAGGCGTCGTCTTACGCGCCTCGCCATCGTGATGACAGGCCCCGATATGGCGCC
CAGGAAGACCTTCTCCGTCCCAAGTCGCCGCCCATGTCGGATGTCCTGCCGGACTACACCCTCATCCGCAACCCC
GATGCGTGGCGGTCCCAAGAGCGGCGCAACTACCACGACATGATCGCGCGCATGGCCAAGCACGTCGACCGGAAC
CCGGCGGACAAGCTGACGCCGGCGCTGGAGGAGCTCAAGATCCTGATCGAGACGAACCCCCGTATATACATGTAC
TTTGTCCAGATGTTTGACGAGATCCCGCATCGCTTCCCGTACAATTCGGACGGGGTGGGCAAGCCCGTCCTCCGC
GACTATCGTCACATGCTGCAGGTCCTCAACCACATCGTCACCCGTGGCCCGGACGTGGACACGGTGGGCGTGCCG
ATGGTCATTATCCTGGCCTATCCGATGGGCACAGCGAGTGGCCACGCCGCGTTCCTCGACCCGACGGTGAACAAG
GCGTTCAAGAAGGTGCTCCGAGAATGGGGTCACTTCCTACTGTCTCCGGCCTCGTGCGACGTCCTCGGCACGAGC
GACTCCGGCTGGTTCGGCAAGCAGAAGCTGCACGAGCTCGAGCAGGCGGCCAACGCCCCGTACCACACGCACAAG
ACGTTTGAGCAGCTGTTCGAGTGCGACCCGTCGGCCGAGTCTCACGGGTACAAGTCCTGGGACGGTAAGTCTGCT
GCTCCTGGCCCGTAA
Transcript >Hirsu2|3864
ATGAGATTCGCAACCGCCTCTTCTGGCGGCCGAAGCAGCCTGCTGCTCCTGCTGCTCTCCGGCGCCTTTGTCGCC
GTCTCGGGCCTCGCCGCTGAGCAGGCGTCGTCTTACGCGCCTCGCCATCGTGATGACAGGCCCCGATATGGCGCC
CAGGAAGACCTTCTCCGTCCCAAGTCGCCGCCCATGTCGGATGTCCTGCCGGACTACACCCTCATCCGCAACCCC
GATGCGTGGCGGTCCCAAGAGCGGCGCAACTACCACGACATGATCGCGCGCATGGCCAAGCACGTCGACCGGAAC
CCGGCGGACAAGCTGACGCCGGCGCTGGAGGAGCTCAAGATCCTGATCGAGACGAACCCCCGTATATACATGTAC
TTTGTCCAGATGTTTGACGAGATCCCGCATCGCTTCCCGTACAATTCGGACGGGGTGGGCAAGCCCGTCCTCCGC
GACTATCGTCACATGCTGCAGGTCCTCAACCACATCGTCACCCGTGGCCCGGACGTGGACACGGTGGGCGTGCCG
ATGGTCATTATCCTGGCCTATCCGATGGGCACAGCGAGTGGCCACGCCGCGTTCCTCGACCCGACGGTGAACAAG
GCGTTCAAGAAGGTGCTCCGAGAATGGGGTCACTTCCTACTGTCTCCGGCCTCGTGCGACGTCCTCGGCACGAGC
GACTCCGGCTGGTTCGGCAAGCAGAAGCTGCACGAGCTCGAGCAGGCGGCCAACGCCCCGTACCACACGCACAAG
ACGTTTGAGCAGCTGTTCGAGTGCGACCCGTCGGCCGAGTCTCACGGGTACAAGTCCTGGGACGGTAAGTCTGCT
GCTCCTGGCCCGTAA
Gene >Hirsu2|3864
ATGAGATTCGCAACCGCCTCTTCTGGCGGCCGAAGCAGCCTGCTGCTCCTGCTGCTCTCCGGCGCCTTTGTCGCC
GTCTCGGGCCTCGCCGCTGAGCAGGCGTCGTCTTACGCGCCTCGCCATCGTGATGACAGGCCCCGATATGGCGCC
CAGGAAGACCTTCTCCGTCCCAAGTCGCCGCCCATGTCGGATGTCCTGCCGGACTACACCCTCATCCGCAAGTCA
GTCCTCCGCCCCCGGCACCCCGTGGATCGAGAGCGGTAGGCAGAGCAAAGGATGGTGAAAGGCTGATGGGAGTCG
TTTCCGCCTTGCCCAGCCCCGATGCGTGGCGGTCCCAAGAGCGGCGCAACTACCACGACATGATCGCGCGCATGG
CCAAGCACGTCGACCGGAACCCGGCGGACAAGCTGACGCCGGCGCTGGAGGAGCTCAAGATCCTGATCGAGACGA
ACCCCCGTATATACATGTACTTTGTCCAGATGTTTGACGAGATCCCGCATCGCTTCCCGTACAATTCGGACGGGG
TGGGCAAGCCCGTCCTCCGCGACTATCGTCACATGCTGCAGGTCCTCAACCACATCGTCACCCGTGGCCCGGACG
TGGACACGGTGGGCGTGCCGATGGTCATTATCCTGGCCTATCCGATGGGCACAGCGAGGTCGGTGCTCCCGTCTC
GCCTCGGAGGGGCCTAGCATCACCCAAGCACGAGAAAGGGAGCTGACTGGAGACGGCATCGCAGTGGCCACGCCG
CGTTCCTCGACCCGACGGTGAACAAGGCGTTCAAGAAGGTGCTCCGAGAATGGGGTCACTTCCTACTGGTATGCC
GTCTTGCTTCCGGGATAGGATTTATCTGATGCGCTTTGTCAGTCTCCGGCCTCGTGCGACGTCCTCGGCACGAGC
GACTCCGGCTGGTTCGGCAAGCAGAAGCTGCACGAGCTCGAGCAGGCGGCCAACGCCCCGTACCACACGCACAAG
ACGTTTGAGCAGCTGTTCGAGTGCGACCCGTCGGCCGAGTCTCACGGGTACAAGTCCTGGGACGGTAAGTCTGCT
GCTCCTGGCCCGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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