Protein ID | Hirsu2|3863 |
Gene name | |
Location | Contig_2036:2086..3001 |
Strand | + |
Gene length (bp) | 915 |
Transcript length (bp) | 915 |
Coding sequence length (bp) | 915 |
Protein length (aa) | 305 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4AZV8|SMD_ARTBC | Sphingomyelinase D OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01728 PE=3 SV=1 | 34 | 304 | 6.0E-74 |
sp|F2SCC4|SMD_TRIRC | Sphingomyelinase D OS=Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892) GN=TERG_01406 PE=3 SV=1 | 37 | 304 | 7.0E-74 |
sp|Q59332|PLD_CORUL | Phospholipase D OS=Corynebacterium ulcerans GN=pld PE=3 SV=1 | 30 | 304 | 3.0E-66 |
sp|B8NQ51|SMD_ASPFN | Sphingomyelinase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=AFLA_004420 PE=1 SV=1 | 14 | 304 | 3.0E-66 |
sp|Q59121|PLD_ARCHD | Phospholipase D OS=Arcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018) GN=pld PE=3 SV=2 | 16 | 304 | 9.0E-64 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4AZV8|SMD_ARTBC | Sphingomyelinase D OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01728 PE=3 SV=1 | 34 | 304 | 6.0E-74 |
sp|F2SCC4|SMD_TRIRC | Sphingomyelinase D OS=Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892) GN=TERG_01406 PE=3 SV=1 | 37 | 304 | 7.0E-74 |
sp|Q59332|PLD_CORUL | Phospholipase D OS=Corynebacterium ulcerans GN=pld PE=3 SV=1 | 30 | 304 | 3.0E-66 |
sp|B8NQ51|SMD_ASPFN | Sphingomyelinase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=AFLA_004420 PE=1 SV=1 | 14 | 304 | 3.0E-66 |
sp|Q59121|PLD_ARCHD | Phospholipase D OS=Arcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018) GN=pld PE=3 SV=2 | 16 | 304 | 9.0E-64 |
sp|P20626|PLD_CORPS | Phospholipase D OS=Corynebacterium pseudotuberculosis GN=pld PE=1 SV=1 | 14 | 304 | 1.0E-63 |
sp|J3K844|SMD_COCIM | Sphingomyelinase D OS=Coccidioides immitis (strain RS) GN=CIMG_06182 PE=3 SV=1 | 34 | 304 | 1.0E-55 |
sp|C0NUU1|SMD_AJECG | Sphingomyelinase D OS=Ajellomyces capsulatus (strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432) GN=HCBG_06705 PE=3 SV=1 | 13 | 304 | 6.0E-54 |
sp|C4JUE5|SMD_UNCRE | Sphingomyelinase D OS=Uncinocarpus reesii (strain UAMH 1704) GN=UREG_04748 PE=3 SV=1 | 36 | 304 | 1.0E-51 |
sp|C0S3M9|SMD_PARBP | Sphingomyelinase D OS=Paracoccidioides brasiliensis (strain Pb03) GN=PABG_02293 PE=3 SV=1 | 36 | 276 | 2.0E-51 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular|Lysosome/Vacuole | Signal peptide | 0.2441 | 0.1005 | 0.8383 | 0.3087 | 0.0767 | 0.1617 | 0.5885 | 0.6135 | 0.2058 | 0.0069 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 28 | 0.999512 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 12 | 34 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 36 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3863 MRIGRDQVGGPWTAVLLLLLLLPATAAGVAVRMGPKPFYAIAHRVLMDYGVRDALRHGANALEIDVQPWRDGWYA DHDGTAWSAGHTAERMFRAVAEHRRAGWPVIFVWLDIKNPDWCDGGWASCNIEALRDLARRILEPAGVRVLYGFW ADHQHGRGYRLIRDGLNANEAVALEGDLDVVARAFERDGPADVRKRVYSRGLFVPAFDFGDCADPGGSGVCPELR RAADSGLFGNVFGWTISADEVETGEVLMENTNVDGLIYGFVATHYHDDQDVLYPLSFLYHWTRANTAKRSYATVR DPPW* |
Coding | >Hirsu2|3863 ATGCGGATCGGCCGGGACCAGGTGGGCGGGCCGTGGACGGCCGTCCTGCTGCTGCTGCTGCTGCTCCCGGCGACG GCGGCCGGGGTGGCGGTGCGGATGGGCCCGAAGCCCTTCTACGCCATCGCGCACCGGGTGCTGATGGACTACGGC GTGCGGGACGCGCTCCGGCACGGGGCCAACGCGCTGGAGATCGACGTGCAGCCGTGGCGGGACGGATGGTACGCA GACCACGACGGCACGGCCTGGAGCGCCGGGCACACGGCGGAGCGCATGTTCCGGGCCGTGGCGGAGCACCGGCGC GCGGGCTGGCCCGTCATCTTCGTCTGGCTCGACATCAAGAACCCGGACTGGTGCGACGGCGGCTGGGCCAGCTGC AACATAGAGGCGCTGCGCGACCTGGCGCGGCGCATCCTCGAGCCGGCCGGCGTCCGGGTCCTGTACGGCTTCTGG GCCGACCACCAGCACGGCCGGGGCTACCGCCTCATCCGCGACGGGCTCAACGCCAACGAGGCCGTTGCGCTCGAG GGCGACTTGGACGTCGTCGCCCGCGCCTTCGAACGCGACGGGCCGGCCGACGTCCGCAAGCGCGTCTACTCGCGC GGCCTCTTCGTCCCGGCCTTTGACTTCGGCGACTGCGCCGACCCGGGCGGCTCCGGCGTCTGCCCGGAGCTGCGC CGCGCCGCCGACTCGGGCCTCTTCGGCAACGTCTTCGGCTGGACCATCTCCGCCGACGAGGTCGAGACCGGCGAG GTCCTGATGGAGAACACCAACGTCGACGGCCTCATCTACGGCTTCGTCGCCACCCACTACCACGACGACCAGGAC GTCCTCTACCCCCTGAGCTTCCTCTACCACTGGACCCGCGCCAACACGGCCAAGCGCTCCTACGCCACCGTCCGC GACCCGCCCTGGTGA |
Transcript | >Hirsu2|3863 ATGCGGATCGGCCGGGACCAGGTGGGCGGGCCGTGGACGGCCGTCCTGCTGCTGCTGCTGCTGCTCCCGGCGACG GCGGCCGGGGTGGCGGTGCGGATGGGCCCGAAGCCCTTCTACGCCATCGCGCACCGGGTGCTGATGGACTACGGC GTGCGGGACGCGCTCCGGCACGGGGCCAACGCGCTGGAGATCGACGTGCAGCCGTGGCGGGACGGATGGTACGCA GACCACGACGGCACGGCCTGGAGCGCCGGGCACACGGCGGAGCGCATGTTCCGGGCCGTGGCGGAGCACCGGCGC GCGGGCTGGCCCGTCATCTTCGTCTGGCTCGACATCAAGAACCCGGACTGGTGCGACGGCGGCTGGGCCAGCTGC AACATAGAGGCGCTGCGCGACCTGGCGCGGCGCATCCTCGAGCCGGCCGGCGTCCGGGTCCTGTACGGCTTCTGG GCCGACCACCAGCACGGCCGGGGCTACCGCCTCATCCGCGACGGGCTCAACGCCAACGAGGCCGTTGCGCTCGAG GGCGACTTGGACGTCGTCGCCCGCGCCTTCGAACGCGACGGGCCGGCCGACGTCCGCAAGCGCGTCTACTCGCGC GGCCTCTTCGTCCCGGCCTTTGACTTCGGCGACTGCGCCGACCCGGGCGGCTCCGGCGTCTGCCCGGAGCTGCGC CGCGCCGCCGACTCGGGCCTCTTCGGCAACGTCTTCGGCTGGACCATCTCCGCCGACGAGGTCGAGACCGGCGAG GTCCTGATGGAGAACACCAACGTCGACGGCCTCATCTACGGCTTCGTCGCCACCCACTACCACGACGACCAGGAC GTCCTCTACCCCCTGAGCTTCCTCTACCACTGGACCCGCGCCAACACGGCCAAGCGCTCCTACGCCACCGTCCGC GACCCGCCCTGGTGA |
Gene | >Hirsu2|3863 ATGCGGATCGGCCGGGACCAGGTGGGCGGGCCGTGGACGGCCGTCCTGCTGCTGCTGCTGCTGCTCCCGGCGACG GCGGCCGGGGTGGCGGTGCGGATGGGCCCGAAGCCCTTCTACGCCATCGCGCACCGGGTGCTGATGGACTACGGC GTGCGGGACGCGCTCCGGCACGGGGCCAACGCGCTGGAGATCGACGTGCAGCCGTGGCGGGACGGATGGTACGCA GACCACGACGGCACGGCCTGGAGCGCCGGGCACACGGCGGAGCGCATGTTCCGGGCCGTGGCGGAGCACCGGCGC GCGGGCTGGCCCGTCATCTTCGTCTGGCTCGACATCAAGAACCCGGACTGGTGCGACGGCGGCTGGGCCAGCTGC AACATAGAGGCGCTGCGCGACCTGGCGCGGCGCATCCTCGAGCCGGCCGGCGTCCGGGTCCTGTACGGCTTCTGG GCCGACCACCAGCACGGCCGGGGCTACCGCCTCATCCGCGACGGGCTCAACGCCAACGAGGCCGTTGCGCTCGAG GGCGACTTGGACGTCGTCGCCCGCGCCTTCGAACGCGACGGGCCGGCCGACGTCCGCAAGCGCGTCTACTCGCGC GGCCTCTTCGTCCCGGCCTTTGACTTCGGCGACTGCGCCGACCCGGGCGGCTCCGGCGTCTGCCCGGAGCTGCGC CGCGCCGCCGACTCGGGCCTCTTCGGCAACGTCTTCGGCTGGACCATCTCCGCCGACGAGGTCGAGACCGGCGAG GTCCTGATGGAGAACACCAACGTCGACGGCCTCATCTACGGCTTCGTCGCCACCCACTACCACGACGACCAGGAC GTCCTCTACCCCCTGAGCTTCCTCTACCACTGGACCCGCGCCAACACGGCCAAGCGCTCCTACGCCACCGTCCGC GACCCGCCCTGGTGA |