Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3862
Gene name
LocationContig_2035:2879..3366
Strand+
Gene length (bp)487
Transcript length (bp)279
Coding sequence length (bp)279
Protein length (aa) 93

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03663 Glyco_hydro_76 Glycosyl hydrolase family 76 2.4E-20 36 91

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q6FLP9|DCW1_CANGA Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 1 91 8.0E-14
sp|Q75DG6|DCW1_ASHGO Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 27 84 2.0E-12
sp|P36091|DCW1_YEAST Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 27 84 6.0E-12
sp|Q5AD78|DCW1_CANAL Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DCW1 PE=1 SV=1 15 83 2.0E-07
sp|Q5ACZ2|DFG5_CANAL Mannan endo-1,6-alpha-mannosidase DFG5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DFG5 PE=1 SV=1 27 84 9.0E-07
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Swissprot ID Swissprot Description Start End E-value
sp|Q6FLP9|DCW1_CANGA Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 1 91 8.0E-14
sp|Q75DG6|DCW1_ASHGO Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 27 84 2.0E-12
sp|P36091|DCW1_YEAST Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 27 84 6.0E-12
sp|Q5AD78|DCW1_CANAL Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DCW1 PE=1 SV=1 15 83 2.0E-07
sp|Q5ACZ2|DFG5_CANAL Mannan endo-1,6-alpha-mannosidase DFG5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DFG5 PE=1 SV=1 27 84 9.0E-07
sp|O74556|YCZ2_SCHPO Putative mannan endo-1,6-alpha-mannosidase C970.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC970.02 PE=3 SV=1 8 91 2.0E-06
sp|Q05031|DFG5_YEAST Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG5 PE=1 SV=1 7 91 9.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3862
MRTTRNRLGLVACVVVPSLWHPLALGLELNVDDEGSIKLAASTAAFGMMRYYTGNNSGDVPGNLPDPYYWWTAGA
MFGTVIDYWQLTGDESR*
Coding >Hirsu2|3862
ATGAGGACGACACGGAACCGGCTCGGCCTCGTGGCCTGCGTCGTTGTCCCCTCGCTGTGGCACCCGCTGGCTCTG
GGCCTGGAGCTGAACGTCGACGACGAAGGCTCGATCAAGCTGGCGGCCAGCACGGCGGCCTTCGGCATGATGCGC
TACTACACCGGCAACAACTCGGGCGACGTGCCGGGAAACCTGCCGGACCCCTACTACTGGTGGACGGCCGGCGCC
ATGTTCGGGACCGTCATCGACTACTGGCAGCTGACGGGCGACGAGTCACGATGA
Transcript >Hirsu2|3862
ATGAGGACGACACGGAACCGGCTCGGCCTCGTGGCCTGCGTCGTTGTCCCCTCGCTGTGGCACCCGCTGGCTCTG
GGCCTGGAGCTGAACGTCGACGACGAAGGCTCGATCAAGCTGGCGGCCAGCACGGCGGCCTTCGGCATGATGCGC
TACTACACCGGCAACAACTCGGGCGACGTGCCGGGAAACCTGCCGGACCCCTACTACTGGTGGACGGCCGGCGCC
ATGTTCGGGACCGTCATCGACTACTGGCAGCTGACGGGCGACGAGTCACGATGA
Gene >Hirsu2|3862
ATGAGGACGACACGGAACCGGCTCGGCCTCGTGGCCTGCGTCGTTGTCCCCTCGCTGTGGCACCCGCTGGCTCTG
GGCCTGGAGCTGAACGTCGACGACGAAGGTCAGAGAGAAGATGGCGGTTGAGGAAAGGTCTGCTCGAGATGCTGA
TGTCGCTCGCGCCGCCCCTTTACACATAGGCTCGATCAAGCTGGCGGCCAGCACGGCGGCCTTCGGCATGATGCG
CTACTACACCGGCAACAACTCGGGCGACGTGCCGGGAAACCTGCCGGACCCCTACTACTGTGAGTCCGGGCGACA
AGACGGGAGAGGCGGATCGCTGACGGCCCGAGGTCGAGGCCAGGGTGGACGGCCGGCGCCATGTTCGGGACCGTC
ATCGACTACTGGCAGCTGACGGGCGACGAGTCGTACAACGAGGTGACGCGGCAGGCGCTGGTGCACCAGGCGGCC
GAGACGCGCGACTTCATGCCGACGAACCAGACGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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