© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3862 |
| Gene name | |
| Location | Contig_2035:2879..3366 |
| Strand | + |
| Gene length (bp) | 487 |
| Transcript length (bp) | 279 |
| Coding sequence length (bp) | 279 |
| Protein length (aa) | 93 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03663 | Glyco_hydro_76 | Glycosyl hydrolase family 76 | 2.4E-20 | 36 | 91 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6FLP9|DCW1_CANGA | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 | 1 | 91 | 8.0E-14 |
| sp|Q75DG6|DCW1_ASHGO | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 | 27 | 84 | 2.0E-12 |
| sp|P36091|DCW1_YEAST | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 | 27 | 84 | 6.0E-12 |
| sp|Q5AD78|DCW1_CANAL | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DCW1 PE=1 SV=1 | 15 | 83 | 2.0E-07 |
| sp|Q5ACZ2|DFG5_CANAL | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DFG5 PE=1 SV=1 | 27 | 84 | 9.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6FLP9|DCW1_CANGA | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 | 1 | 91 | 8.0E-14 |
| sp|Q75DG6|DCW1_ASHGO | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 | 27 | 84 | 2.0E-12 |
| sp|P36091|DCW1_YEAST | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 | 27 | 84 | 6.0E-12 |
| sp|Q5AD78|DCW1_CANAL | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DCW1 PE=1 SV=1 | 15 | 83 | 2.0E-07 |
| sp|Q5ACZ2|DFG5_CANAL | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DFG5 PE=1 SV=1 | 27 | 84 | 9.0E-07 |
| sp|O74556|YCZ2_SCHPO | Putative mannan endo-1,6-alpha-mannosidase C970.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC970.02 PE=3 SV=1 | 8 | 91 | 2.0E-06 |
| sp|Q05031|DFG5_YEAST | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG5 PE=1 SV=1 | 7 | 91 | 9.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1263 | 0.0945 | 0.8491 | 0.0847 | 0.1075 | 0.2033 | 0.5598 | 0.3754 | 0.1932 | 0.0607 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 26 | 0.834541 |
| Orthofinder run ID | 4 |
| Orthogroup | 7 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3862 MRTTRNRLGLVACVVVPSLWHPLALGLELNVDDEGSIKLAASTAAFGMMRYYTGNNSGDVPGNLPDPYYWWTAGA MFGTVIDYWQLTGDESR* |
| Coding | >Hirsu2|3862 ATGAGGACGACACGGAACCGGCTCGGCCTCGTGGCCTGCGTCGTTGTCCCCTCGCTGTGGCACCCGCTGGCTCTG GGCCTGGAGCTGAACGTCGACGACGAAGGCTCGATCAAGCTGGCGGCCAGCACGGCGGCCTTCGGCATGATGCGC TACTACACCGGCAACAACTCGGGCGACGTGCCGGGAAACCTGCCGGACCCCTACTACTGGTGGACGGCCGGCGCC ATGTTCGGGACCGTCATCGACTACTGGCAGCTGACGGGCGACGAGTCACGATGA |
| Transcript | >Hirsu2|3862 ATGAGGACGACACGGAACCGGCTCGGCCTCGTGGCCTGCGTCGTTGTCCCCTCGCTGTGGCACCCGCTGGCTCTG GGCCTGGAGCTGAACGTCGACGACGAAGGCTCGATCAAGCTGGCGGCCAGCACGGCGGCCTTCGGCATGATGCGC TACTACACCGGCAACAACTCGGGCGACGTGCCGGGAAACCTGCCGGACCCCTACTACTGGTGGACGGCCGGCGCC ATGTTCGGGACCGTCATCGACTACTGGCAGCTGACGGGCGACGAGTCACGATGA |
| Gene | >Hirsu2|3862 ATGAGGACGACACGGAACCGGCTCGGCCTCGTGGCCTGCGTCGTTGTCCCCTCGCTGTGGCACCCGCTGGCTCTG GGCCTGGAGCTGAACGTCGACGACGAAGGTCAGAGAGAAGATGGCGGTTGAGGAAAGGTCTGCTCGAGATGCTGA TGTCGCTCGCGCCGCCCCTTTACACATAGGCTCGATCAAGCTGGCGGCCAGCACGGCGGCCTTCGGCATGATGCG CTACTACACCGGCAACAACTCGGGCGACGTGCCGGGAAACCTGCCGGACCCCTACTACTGTGAGTCCGGGCGACA AGACGGGAGAGGCGGATCGCTGACGGCCCGAGGTCGAGGCCAGGGTGGACGGCCGGCGCCATGTTCGGGACCGTC ATCGACTACTGGCAGCTGACGGGCGACGAGTCGTACAACGAGGTGACGCGGCAGGCGCTGGTGCACCAGGCGGCC GAGACGCGCGACTTCATGCCGACGAACCAGACGATGA |