© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3857 |
| Gene name | |
| Location | Contig_2030:1443..3398 |
| Strand | - |
| Gene length (bp) | 1955 |
| Transcript length (bp) | 1590 |
| Coding sequence length (bp) | 1590 |
| Protein length (aa) | 530 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.2E-37 | 86 | 454 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 9 | 529 | 3.0E-96 |
| sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 49 | 528 | 9.0E-84 |
| sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 2 | 527 | 2.0E-73 |
| sp|O94572|YGDF_SCHPO | Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 | 51 | 528 | 7.0E-73 |
| sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 47 | 528 | 8.0E-66 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 9 | 529 | 3.0E-96 |
| sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 49 | 528 | 9.0E-84 |
| sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 2 | 527 | 2.0E-73 |
| sp|O94572|YGDF_SCHPO | Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 | 51 | 528 | 7.0E-73 |
| sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 47 | 528 | 8.0E-66 |
| sp|B5BP49|YP55_SCHPO | Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 | 23 | 529 | 2.0E-63 |
| sp|Q9C0V8|YHJ1_SCHPO | Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 | 43 | 524 | 8.0E-53 |
| sp|Q9C0U9|YQD3_SCHPO | Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 | 2 | 468 | 4.0E-45 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 73 | 527 | 1.0E-35 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 72 | 527 | 2.0E-34 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 47 | 499 | 2.0E-31 |
| sp|Q12235|YCT1_YEAST | High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 | 16 | 522 | 1.0E-30 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 56 | 527 | 2.0E-30 |
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 76 | 412 | 5.0E-29 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 65 | 358 | 7.0E-29 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 72 | 529 | 2.0E-26 |
| sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 72 | 386 | 3.0E-25 |
| sp|P39709|SEO1_YEAST | Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 | 17 | 393 | 6.0E-25 |
| sp|O43000|LIZ1_SCHPO | Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 | 65 | 285 | 6.0E-24 |
| sp|P40445|YIQ6_YEAST | Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 | 24 | 525 | 1.0E-21 |
| sp|P76470|RHMT_ECOLI | Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 | 71 | 327 | 7.0E-21 |
| sp|Q05181|PHT1_PSEPU | Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 | 71 | 394 | 3.0E-19 |
| sp|P25621|FEN2_YEAST | Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 | 68 | 486 | 5.0E-19 |
| sp|P53241|VHT1_YEAST | Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 | 2 | 392 | 7.0E-17 |
| sp|Q9SDI4|PHT41_ORYSJ | Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1 | 80 | 317 | 1.0E-10 |
| sp|O13880|VHT1_SCHPO | Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 | 71 | 452 | 2.0E-10 |
| sp|Q8GX78|ANTR2_ARATH | Ascorbate transporter, chloroplastic OS=Arabidopsis thaliana GN=PHT4;4 PE=1 SV=1 | 80 | 349 | 1.0E-09 |
| sp|P0CF20|YO163_YEAST | Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 | 157 | 272 | 3.0E-09 |
| sp|Q652N5|PHT44_ORYSJ | Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1 | 80 | 374 | 1.0E-08 |
| sp|O82390|ANTR1_ARATH | Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1 | 80 | 315 | 2.0E-07 |
| sp|O13879|YE1F_SCHPO | Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 | 71 | 342 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 82 | 104 | 22 |
| 2 | 119 | 141 | 22 |
| 3 | 146 | 168 | 22 |
| 4 | 173 | 195 | 22 |
| 5 | 208 | 230 | 22 |
| 6 | 240 | 262 | 22 |
| 7 | 314 | 336 | 22 |
| 8 | 346 | 368 | 22 |
| 9 | 375 | 394 | 19 |
| 10 | 404 | 426 | 22 |
| 11 | 438 | 457 | 19 |
| 12 | 472 | 494 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3857 MSSSSVGEEKMGQHDVDVRHLASSSSSETPARAPPASGFDDAPRPASGAVDAAWKFLDDHRDARGVDAVDLKALR RKIDWHIVPLMFCCYTMQFLDKVILNYAAVMGISKDLSLKGNDFSNIATFLFVGLLCFEIPNIYFLQKFPAAKWL GFNVTFWGVATACGAAARNYPTLLASRIFLGIFEATIGPSLMLISSQWYTKSEQAPRFSFWYLGLGLGQIIGGAV SYAFQHVAPGAGLAGWRVMFLLLGVLTVLFGLCTFFFLPDTPMQAPWLSSTEKVALLKHVSVNQTGIQSRTFRPK EIVEALLDPQIWLLILSVVLLSVSSGVVTTYSATLIKNLGYNPKQAALMNMPSGVVSIFFTLLVGFGIRKQSHRW AWIIACIIPAILGGALMSFLNPHSNRSGVLAGIYLVNAVVAPLTIFYNWTVANCAGGTKRALASALVSGSFSLGN IIGPQTFQARDAPDFRPAKLAVMGTQAGCALTTFALFLYYVWANKRRNDRSRQQEESFMSPDVWASMTDKENKHF RYTY* |
| Coding | >Hirsu2|3857 ATGTCTTCCTCGTCCGTGGGCGAAGAGAAGATGGGCCAGCACGACGTCGACGTCCGCCACCTCGCCTCGTCCTCC TCGAGCGAAACGCCGGCCCGGGCCCCGCCGGCCTCCGGCTTCGACGATGCCCCGCGCCCGGCCTCCGGCGCCGTC GACGCCGCCTGGAAGTTCCTCGACGACCACCGCGACGCCCGGGGCGTCGACGCCGTCGACCTCAAGGCCCTGCGC CGCAAGATCGACTGGCACATCGTCCCGCTCATGTTCTGCTGCTACACCATGCAGTTCCTCGACAAAGTTATCCTC AACTACGCCGCCGTCATGGGCATCAGCAAGGACCTGTCGCTCAAGGGCAACGACTTCTCCAACATAGCCACCTTT CTCTTCGTCGGCCTCCTCTGCTTCGAGATCCCCAACATCTACTTCCTCCAAAAGTTCCCGGCCGCCAAGTGGCTC GGCTTCAACGTCACCTTCTGGGGCGTGGCGACGGCGTGCGGCGCCGCGGCGCGCAACTACCCGACGCTGCTGGCG TCGCGCATCTTCCTCGGCATCTTCGAGGCCACCATCGGGCCGTCGCTCATGCTCATCAGCAGCCAGTGGTACACC AAGTCGGAGCAGGCCCCGCGCTTCTCCTTCTGGTACCTCGGCCTCGGCCTCGGCCAGATCATCGGCGGCGCCGTC TCGTACGCCTTCCAGCACGTCGCCCCGGGCGCCGGCCTGGCCGGCTGGCGCGTCATGTTCCTCCTCCTCGGCGTC CTCACCGTCCTCTTCGGCCTCTGCACCTTCTTCTTCCTGCCCGACACCCCGATGCAGGCCCCCTGGCTGTCGAGC ACGGAGAAGGTGGCGCTGCTCAAGCACGTCAGCGTCAACCAGACCGGCATCCAGAGCCGCACGTTCCGCCCCAAG GAGATCGTCGAGGCCCTGCTCGACCCCCAGATCTGGCTGCTCATCCTGTCCGTCGTCCTCCTGTCCGTCTCGAGC GGCGTCGTCACCACCTACTCCGCCACCCTCATCAAGAACCTCGGCTACAACCCCAAGCAGGCCGCCCTCATGAAC ATGCCCTCCGGCGTCGTCAGCATCTTCTTCACCCTCCTCGTCGGCTTCGGCATCCGCAAGCAGTCCCACCGCTGG GCCTGGATCATCGCCTGCATCATTCCTGCAATCCTCGGCGGCGCCCTCATGTCCTTCCTGAACCCCCACTCCAAC CGGTCTGGCGTCCTGGCCGGCATCTACCTCGTTAATGCCGTCGTCGCCCCCCTGACCATCTTCTACAACTGGACC GTCGCCAACTGCGCCGGCGGCACCAAGCGCGCCTTGGCCTCCGCTCTCGTCAGCGGCTCCTTCTCGCTCGGCAAC ATCATCGGGCCCCAGACCTTCCAGGCCCGCGACGCGCCCGACTTCCGCCCGGCCAAGCTGGCCGTCATGGGCACC CAGGCCGGCTGCGCCCTCACCACCTTCGCCCTCTTCCTCTACTACGTCTGGGCCAACAAGCGCCGCAACGACCGC AGCAGGCAGCAGGAGGAGTCCTTCATGTCCCCCGACGTCTGGGCCTCGATGACGGACAAGGAGAACAAGCACTTC CGATACACGTACTAG |
| Transcript | >Hirsu2|3857 ATGTCTTCCTCGTCCGTGGGCGAAGAGAAGATGGGCCAGCACGACGTCGACGTCCGCCACCTCGCCTCGTCCTCC TCGAGCGAAACGCCGGCCCGGGCCCCGCCGGCCTCCGGCTTCGACGATGCCCCGCGCCCGGCCTCCGGCGCCGTC GACGCCGCCTGGAAGTTCCTCGACGACCACCGCGACGCCCGGGGCGTCGACGCCGTCGACCTCAAGGCCCTGCGC CGCAAGATCGACTGGCACATCGTCCCGCTCATGTTCTGCTGCTACACCATGCAGTTCCTCGACAAAGTTATCCTC AACTACGCCGCCGTCATGGGCATCAGCAAGGACCTGTCGCTCAAGGGCAACGACTTCTCCAACATAGCCACCTTT CTCTTCGTCGGCCTCCTCTGCTTCGAGATCCCCAACATCTACTTCCTCCAAAAGTTCCCGGCCGCCAAGTGGCTC GGCTTCAACGTCACCTTCTGGGGCGTGGCGACGGCGTGCGGCGCCGCGGCGCGCAACTACCCGACGCTGCTGGCG TCGCGCATCTTCCTCGGCATCTTCGAGGCCACCATCGGGCCGTCGCTCATGCTCATCAGCAGCCAGTGGTACACC AAGTCGGAGCAGGCCCCGCGCTTCTCCTTCTGGTACCTCGGCCTCGGCCTCGGCCAGATCATCGGCGGCGCCGTC TCGTACGCCTTCCAGCACGTCGCCCCGGGCGCCGGCCTGGCCGGCTGGCGCGTCATGTTCCTCCTCCTCGGCGTC CTCACCGTCCTCTTCGGCCTCTGCACCTTCTTCTTCCTGCCCGACACCCCGATGCAGGCCCCCTGGCTGTCGAGC ACGGAGAAGGTGGCGCTGCTCAAGCACGTCAGCGTCAACCAGACCGGCATCCAGAGCCGCACGTTCCGCCCCAAG GAGATCGTCGAGGCCCTGCTCGACCCCCAGATCTGGCTGCTCATCCTGTCCGTCGTCCTCCTGTCCGTCTCGAGC GGCGTCGTCACCACCTACTCCGCCACCCTCATCAAGAACCTCGGCTACAACCCCAAGCAGGCCGCCCTCATGAAC ATGCCCTCCGGCGTCGTCAGCATCTTCTTCACCCTCCTCGTCGGCTTCGGCATCCGCAAGCAGTCCCACCGCTGG GCCTGGATCATCGCCTGCATCATTCCTGCAATCCTCGGCGGCGCCCTCATGTCCTTCCTGAACCCCCACTCCAAC CGGTCTGGCGTCCTGGCCGGCATCTACCTCGTTAATGCCGTCGTCGCCCCCCTGACCATCTTCTACAACTGGACC GTCGCCAACTGCGCCGGCGGCACCAAGCGCGCCTTGGCCTCCGCTCTCGTCAGCGGCTCCTTCTCGCTCGGCAAC ATCATCGGGCCCCAGACCTTCCAGGCCCGCGACGCGCCCGACTTCCGCCCGGCCAAGCTGGCCGTCATGGGCACC CAGGCCGGCTGCGCCCTCACCACCTTCGCCCTCTTCCTCTACTACGTCTGGGCCAACAAGCGCCGCAACGACCGC AGCAGGCAGCAGGAGGAGTCCTTCATGTCCCCCGACGTCTGGGCCTCGATGACGGACAAGGAGAACAAGCACTTC CGATACACGTACTAG |
| Gene | >Hirsu2|3857 ATGTCTTCCTCGTCCGTGGGCGAAGAGAAGATGGGCCAGCACGACGTCGACGTCCGCCACCTCGCCTCGTCCTCC TCGAGCGAAACGCCGGCCCGGGCCCCGCCGGCCTCCGGCTTCGACGATGCCCCGCGCCCGGCCTCCGGCGCCGTC GACGCCGCCTGGAAGTTCCTCGACGACCACCGCGACGCCCGGGGCGTCGACGCCGTCGACCTCAAGGCCCTGCGC CGCAAGATCGACTGGCACATCGTCCCGCTCATGTTCTGCTGCTACACCATGCAGTTCCTCGACAAAGTTATCCTC AACGTCCGTCTTCTCTCATCATCTCTTCCCCCCTTTTCCCTATTGCTTTCTCTCCTCGCCTTGCGCTGACGCCGA CTCGACCGTGGAAACCTACAGTACGCCGCCGTCATGGGCATCAGCAAGGACCTGTCGCTCAAGGGCAACGACTTC TCCAACATAGCCACCTTTCTCTTCGTCGGCCTCCTCTGCTTCGAGATCCCCAACAGTGCGTCGTCCTCTCTCTCT CTCTCTCTCTACCTCCCCCGTCTCGCCGCCTTGTACCGCGCCCGTCCGTCCCGAGATTCTTGGTCTGACGCTCCG TCGAAATCCCGCGCAGTCTACTTCCTCCAAAAGTTCCCGGCCGCCAAGTGGCTCGGCTTCAACGTCACCTTCTGG GGCGTGGCGACGGCGTGCGGCGCCGCGGCGCGCAACTACCCGACGCTGCTGGCGTCGCGCATCTTCCTCGGCATC TTCGAGGCCACCATCGGGCCGTCGCTCATGCTCATCAGCAGCCAGTGGTACACCAAGTCGGAGCAGGCCCCGCGC TTCTCCTTCTGGTACCTCGGCCTCGGCCTCGGCCAGATCATCGGCGGCGCCGTCTCGTACGCCTTCCAGCACGTC GCCCCGGGCGCCGGCCTGGCCGGCTGGCGCGTCATGTTCCTCCTCCTCGGCGTCCTCACCGTCCTCTTCGGCCTC TGCACCTTCTTCTTCCTGCCCGACACCCCGATGCAGGCCCCCTGGCTGTCGAGCACGGAGAAGGTGGCGCTGCTC AAGCACGTCAGCGTCAACCAGACCGGCATCCAGAGCCGCACGTTCCGCCCCAAGGAGATCGTCGAGGCCCTGCTC GACCCCCAGATCTGGCTGCTCATCCTGTCCGTCGTCCTCCTGTCCGTCTCGAGCGGCGTCGTCACCACCTACTCC GCCACCCTCATCAAGAACCTCGGCTACAACCCCAAGCAGGCCGCCCTCATGAACATGCCCTCCGGCGTCGTCAGC ATCTTCTTCACCCTCCTCGTCGGCTTCGGCATCCGCAAGCAGTCCCACCGCTGGGCCTGGATCATCGCCTGCATC ATTCCTGCGTACGAACCCCGTCCTTCTCCCTCCCCCATCTCACAGGCGCCGTCCGTCTATACATCTATACTGACC GTCCGTCCGTCTTCTCCAGAATCCTCGGCGGCGCCCTCATGTCCTTCCTGAACCCCCACTCCAACCGGTCTGGCG TCCTGGCCGGCATCTACCTCGTTAATGCCGTCGTCGCCCCCCTGACCATCTTCTACAACGTACGTCCCTGTTCTT CCATCCTCTCCTCCCCTGGCAACGTCGGCCGGCTGACTTTCTCTCTCGCCTCTGACCAGTGGACCGTCGCCAACT GCGCCGGCGGCACCAAGCGCGCCTTGGCCTCCGCTCTCGTCAGCGGCTCCTTCTCGCTCGGCAACATCATCGGGC CCCAGACCTTCCAGGCCCGCGACGCGCCCGACTTCCGCCCGGCCAAGCTGGCCGTCATGGGCACCCAGGCCGGCT GCGCCCTCACCACCTTCGCCCTCTTCCTCTACTACGTCTGGGCCAACAAGCGCCGCAACGACCGCAGCAGGCAGC AGGAGGAGTCCTTCATGTCCCCCGACGTCTGGGCCTCGATGACGGACAAGGAGAACAAGCACTTCCGATACACGT ACTAG |