Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3849
Gene name
LocationContig_203:11774..12801
Strand+
Gene length (bp)1027
Transcript length (bp)939
Coding sequence length (bp)939
Protein length (aa) 313

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 1.8E-13 7 284

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4APQ6|TRXR_ARTBC Probable thioredoxin reductase ARB_06224 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_06224 PE=1 SV=1 7 305 6.0E-23

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3849
MSVDLIDVAILGGGPAGLTAAATLARQLHTAVVFDSKSYRNERASRMHMVAGWEKADPREFRAKARRDIESNYPS
VRFADCAVARVEKQTDCLFRLWDDGGREWSSRKVLLAVGSSDTYPDLEGYEALWARKIFHCLFCHGYEDRGAPSV
GVLAVAPVVVPFLVLHMAENAAQLGERVVIYTNGNAELTEQLGSTFEVEPRPIRRLVDKAGTDCVTVELADGTAR
DETFLVHNPQTGVKGPFVAQLGLETTPMGDVQAKAPTYQTSVRGVFAAGDCITPYKVIPGALSSGCNAAVAASTQ
LQAEKHHQTPMF*
Coding >Hirsu2|3849
ATGTCTGTCGACCTCATCGACGTCGCCATCCTGGGAGGCGGGCCCGCCGGCCTCACCGCCGCCGCGACCCTGGCC
CGTCAACTGCACACGGCCGTCGTGTTCGACTCCAAGAGCTACCGGAACGAACGGGCCTCGCGCATGCACATGGTC
GCCGGCTGGGAGAAGGCCGACCCGCGCGAGTTCCGGGCCAAGGCGAGGAGGGACATCGAGTCCAACTACCCGTCG
GTCCGGTTTGCCGACTGCGCCGTGGCCAGGGTCGAGAAGCAGACCGACTGCCTCTTCCGCCTCTGGGACGACGGC
GGCCGGGAATGGAGCTCCCGAAAGGTCCTGCTGGCCGTCGGCTCGTCGGACACGTATCCGGACCTGGAGGGATAC
GAGGCCCTGTGGGCGAGGAAGATCTTCCACTGCCTGTTCTGCCACGGCTACGAGGACCGCGGCGCCCCGTCCGTC
GGCGTCCTCGCCGTGGCCCCCGTCGTCGTCCCGTTCCTGGTGCTGCACATGGCGGAGAACGCGGCCCAGCTGGGC
GAGCGGGTCGTCATCTACACCAACGGCAACGCGGAGCTGACGGAGCAGCTCGGCAGCACGTTCGAGGTCGAGCCT
CGGCCGATCCGGCGGCTGGTCGACAAGGCCGGGACCGACTGCGTCACCGTCGAGCTCGCCGACGGCACCGCCCGG
GACGAGACGTTCCTGGTGCACAACCCGCAGACGGGCGTCAAGGGCCCCTTCGTCGCCCAGCTCGGGCTCGAGACG
ACGCCCATGGGCGACGTCCAGGCCAAGGCGCCCACGTACCAGACCAGCGTGCGCGGCGTCTTCGCCGCCGGCGAC
TGCATCACTCCCTACAAGGTGATCCCGGGCGCCCTGTCGAGCGGCTGCAACGCGGCCGTGGCCGCCAGCACGCAG
CTGCAGGCCGAGAAGCATCATCAGACGCCCATGTTCTGA
Transcript >Hirsu2|3849
ATGTCTGTCGACCTCATCGACGTCGCCATCCTGGGAGGCGGGCCCGCCGGCCTCACCGCCGCCGCGACCCTGGCC
CGTCAACTGCACACGGCCGTCGTGTTCGACTCCAAGAGCTACCGGAACGAACGGGCCTCGCGCATGCACATGGTC
GCCGGCTGGGAGAAGGCCGACCCGCGCGAGTTCCGGGCCAAGGCGAGGAGGGACATCGAGTCCAACTACCCGTCG
GTCCGGTTTGCCGACTGCGCCGTGGCCAGGGTCGAGAAGCAGACCGACTGCCTCTTCCGCCTCTGGGACGACGGC
GGCCGGGAATGGAGCTCCCGAAAGGTCCTGCTGGCCGTCGGCTCGTCGGACACGTATCCGGACCTGGAGGGATAC
GAGGCCCTGTGGGCGAGGAAGATCTTCCACTGCCTGTTCTGCCACGGCTACGAGGACCGCGGCGCCCCGTCCGTC
GGCGTCCTCGCCGTGGCCCCCGTCGTCGTCCCGTTCCTGGTGCTGCACATGGCGGAGAACGCGGCCCAGCTGGGC
GAGCGGGTCGTCATCTACACCAACGGCAACGCGGAGCTGACGGAGCAGCTCGGCAGCACGTTCGAGGTCGAGCCT
CGGCCGATCCGGCGGCTGGTCGACAAGGCCGGGACCGACTGCGTCACCGTCGAGCTCGCCGACGGCACCGCCCGG
GACGAGACGTTCCTGGTGCACAACCCGCAGACGGGCGTCAAGGGCCCCTTCGTCGCCCAGCTCGGGCTCGAGACG
ACGCCCATGGGCGACGTCCAGGCCAAGGCGCCCACGTACCAGACCAGCGTGCGCGGCGTCTTCGCCGCCGGCGAC
TGCATCACTCCCTACAAGGTGATCCCGGGCGCCCTGTCGAGCGGCTGCAACGCGGCCGTGGCCGCCAGCACGCAG
CTGCAGGCCGAGAAGCATCATCAGACGCCCATGTTCTGA
Gene >Hirsu2|3849
ATGTCTGTCGACCTCATCGACGTCGCCATCCTGGGAGGCGGGCCCGCCGGCCTCACCGCCGCCGCGACCCTGGCC
CGTCAACTGCACACGGCCGTCGTGTTCGACTCCAAGAGCTACCGGAACGAACGGGCCTCGCGCATGCACATGGTC
GCCGGCTGGGAGAAGGCCGACCCGCGCGAGTTCCGGGCCAAGGCGAGGAGGGACATCGAGTCCAACTACCCGTCG
GTCCGGTTTGCCGACTGCGCCGTGGCCAGGGTCGAGAAGCAGACCGACTGCCTCTTCCGCCTCTGGGACGACGGC
GGCCGGGAATGGAGCTCCCGAAAGGTCCTGCTGGCCGTCGGCTCGTCGGACACGTATCCGGACCTGGAGGGATAC
GAGGCCCTGTGGGCGAGGAAGATGTGAGCCCCCCCGCCCTTGCCCCGTGCAACTCGTGATGCTCCGAGTCCGCCG
GCTGACTGCCGTCGCCTCGTCTTCAACGCTTGACAGCTTCCACTGCCTGTTCTGCCACGGCTACGAGGACCGCGG
CGCCCCGTCCGTCGGCGTCCTCGCCGTGGCCCCCGTCGTCGTCCCGTTCCTGGTGCTGCACATGGCGGAGAACGC
GGCCCAGCTGGGCGAGCGGGTCGTCATCTACACCAACGGCAACGCGGAGCTGACGGAGCAGCTCGGCAGCACGTT
CGAGGTCGAGCCTCGGCCGATCCGGCGGCTGGTCGACAAGGCCGGGACCGACTGCGTCACCGTCGAGCTCGCCGA
CGGCACCGCCCGGGACGAGACGTTCCTGGTGCACAACCCGCAGACGGGCGTCAAGGGCCCCTTCGTCGCCCAGCT
CGGGCTCGAGACGACGCCCATGGGCGACGTCCAGGCCAAGGCGCCCACGTACCAGACCAGCGTGCGCGGCGTCTT
CGCCGCCGGCGACTGCATCACTCCCTACAAGGTGATCCCGGGCGCCCTGTCGAGCGGCTGCAACGCGGCCGTGGC
CGCCAGCACGCAGCTGCAGGCCGAGAAGCATCATCAGACGCCCATGTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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