© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3847 |
| Gene name | |
| Location | Contig_203:7339..8023 |
| Strand | - |
| Gene length (bp) | 684 |
| Transcript length (bp) | 684 |
| Coding sequence length (bp) | 684 |
| Protein length (aa) | 228 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03061 | 4HBT | Thioesterase superfamily | 1.4E-09 | 129 | 212 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5T1C6|THEM4_HUMAN | Acyl-coenzyme A thioesterase THEM4 OS=Homo sapiens GN=THEM4 PE=1 SV=1 | 113 | 225 | 2.0E-10 |
| sp|A1A4L1|THEM4_BOVIN | Acyl-coenzyme A thioesterase THEM4 OS=Bos taurus GN=THEM4 PE=2 SV=1 | 113 | 226 | 4.0E-08 |
| sp|Q3UUI3|THEM4_MOUSE | Acyl-coenzyme A thioesterase THEM4 OS=Mus musculus GN=Them4 PE=1 SV=1 | 113 | 226 | 1.0E-07 |
| sp|Q566R0|THEM4_RAT | Acyl-coenzyme A thioesterase THEM4 OS=Rattus norvegicus GN=Them4 PE=2 SV=1 | 113 | 225 | 3.0E-07 |
| sp|Q6GLK2|THEM4_XENLA | Acyl-coenzyme A thioesterase THEM4 OS=Xenopus laevis GN=them4 PE=2 SV=2 | 113 | 225 | 1.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3847 MPDEAAAAAAPFRVLCPALGLVPAQTPPGLYEAAVRHFAAVPWCAALLSPAADGAEPAIAFVPQCFNPAPGGGED QFVGATLARAPGALLQMLCLFRPDDAAHVRDPARPIGRVSTLYALGDGLSGYRGILHGGVVATLMDETLGIVHEL NAVLGKAGAAPAGATNVTARLAVSFRRPVPVPGHVRVTAWVCAVDGRKTRMACEVAGPDGTVMAEAESVWVMVGP KM* |
| Coding | >Hirsu2|3847 ATGCCGGACGAGGCCGCCGCCGCCGCGGCGCCGTTCCGGGTGCTCTGCCCGGCGCTCGGGCTGGTGCCGGCGCAG ACGCCGCCGGGGCTGTACGAGGCGGCGGTGCGGCACTTCGCGGCGGTGCCGTGGTGCGCGGCGCTGCTGTCGCCG GCGGCGGACGGGGCGGAGCCGGCCATCGCCTTCGTGCCGCAGTGCTTCAACCCGGCGCCCGGCGGGGGCGAGGAC CAGTTCGTGGGCGCGACGCTGGCCCGGGCGCCGGGCGCGCTGCTGCAGATGCTGTGCCTGTTCCGGCCCGACGAC GCGGCCCACGTGCGCGACCCGGCGCGGCCCATCGGCCGCGTCTCGACCCTGTACGCCCTCGGCGACGGCCTGTCG GGCTACCGCGGCATCCTGCACGGCGGCGTCGTCGCGACCCTGATGGACGAGACGCTCGGCATCGTGCACGAGCTC AACGCCGTCCTCGGCAAGGCCGGCGCCGCCCCGGCCGGCGCCACCAACGTCACCGCCCGCCTGGCCGTCTCCTTC CGCCGCCCCGTGCCGGTGCCGGGCCACGTCCGCGTCACGGCCTGGGTCTGCGCCGTCGACGGCCGCAAGACCCGC ATGGCCTGCGAGGTCGCCGGCCCGGACGGCACCGTCATGGCCGAGGCCGAGAGCGTCTGGGTCATGGTCGGGCCC AAGATGTAG |
| Transcript | >Hirsu2|3847 ATGCCGGACGAGGCCGCCGCCGCCGCGGCGCCGTTCCGGGTGCTCTGCCCGGCGCTCGGGCTGGTGCCGGCGCAG ACGCCGCCGGGGCTGTACGAGGCGGCGGTGCGGCACTTCGCGGCGGTGCCGTGGTGCGCGGCGCTGCTGTCGCCG GCGGCGGACGGGGCGGAGCCGGCCATCGCCTTCGTGCCGCAGTGCTTCAACCCGGCGCCCGGCGGGGGCGAGGAC CAGTTCGTGGGCGCGACGCTGGCCCGGGCGCCGGGCGCGCTGCTGCAGATGCTGTGCCTGTTCCGGCCCGACGAC GCGGCCCACGTGCGCGACCCGGCGCGGCCCATCGGCCGCGTCTCGACCCTGTACGCCCTCGGCGACGGCCTGTCG GGCTACCGCGGCATCCTGCACGGCGGCGTCGTCGCGACCCTGATGGACGAGACGCTCGGCATCGTGCACGAGCTC AACGCCGTCCTCGGCAAGGCCGGCGCCGCCCCGGCCGGCGCCACCAACGTCACCGCCCGCCTGGCCGTCTCCTTC CGCCGCCCCGTGCCGGTGCCGGGCCACGTCCGCGTCACGGCCTGGGTCTGCGCCGTCGACGGCCGCAAGACCCGC ATGGCCTGCGAGGTCGCCGGCCCGGACGGCACCGTCATGGCCGAGGCCGAGAGCGTCTGGGTCATGGTCGGGCCC AAGATGTAG |
| Gene | >Hirsu2|3847 ATGCCGGACGAGGCCGCCGCCGCCGCGGCGCCGTTCCGGGTGCTCTGCCCGGCGCTCGGGCTGGTGCCGGCGCAG ACGCCGCCGGGGCTGTACGAGGCGGCGGTGCGGCACTTCGCGGCGGTGCCGTGGTGCGCGGCGCTGCTGTCGCCG GCGGCGGACGGGGCGGAGCCGGCCATCGCCTTCGTGCCGCAGTGCTTCAACCCGGCGCCCGGCGGGGGCGAGGAC CAGTTCGTGGGCGCGACGCTGGCCCGGGCGCCGGGCGCGCTGCTGCAGATGCTGTGCCTGTTCCGGCCCGACGAC GCGGCCCACGTGCGCGACCCGGCGCGGCCCATCGGCCGCGTCTCGACCCTGTACGCCCTCGGCGACGGCCTGTCG GGCTACCGCGGCATCCTGCACGGCGGCGTCGTCGCGACCCTGATGGACGAGACGCTCGGCATCGTGCACGAGCTC AACGCCGTCCTCGGCAAGGCCGGCGCCGCCCCGGCCGGCGCCACCAACGTCACCGCCCGCCTGGCCGTCTCCTTC CGCCGCCCCGTGCCGGTGCCGGGCCACGTCCGCGTCACGGCCTGGGTCTGCGCCGTCGACGGCCGCAAGACCCGC ATGGCCTGCGAGGTCGCCGGCCCGGACGGCACCGTCATGGCCGAGGCCGAGAGCGTCTGGGTCATGGTCGGGCCC AAGATGTAG |