Protein ID | Hirsu2|3837 |
Gene name | |
Location | Contig_2023:53..2867 |
Strand | + |
Gene length (bp) | 2814 |
Transcript length (bp) | 2403 |
Coding sequence length (bp) | 2403 |
Protein length (aa) | 801 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13632 | Glyco_trans_2_3 | Glycosyl transferase family group 2 | 5.6E-49 | 420 | 623 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane | Signal peptide|Transmembrane domain | 0.1739 | 0.093 | 0.0562 | 0.5607 | 0.0803 | 0.0044 | 0.4463 | 0.4583 | 0.6289 | 0.004 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 219 | 241 | 22 |
2 | 614 | 636 | 22 |
3 | 649 | 671 | 22 |
4 | 691 | 713 | 22 |
5 | 741 | 763 | 22 |
6 | 773 | 795 | 22 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GT2_Glyco_trans_2_3 | 2.0E-49 | 420 | 642 |
Orthofinder run ID | 4 |
Orthogroup | 220 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3837 MVSYLHRRAIASGWIPPDSARNHDDCLGVLLRRSRGSYVTAPDPVHAVLLDACLRLNLAVAVTLRPQMLDGILRS LAPGQAELRFKGGSQIQVVESLASVNSSNIKKFQYALVSRQEHLVLAWHDDLERIIPMATQVEEKLLSLVWGEGK LPFNIGLPSGAPSIMSSGMSSPNGTMTPALEKAGAKIQISESTEELEEDSGFERPESVERPVARASAVFIGLAMC LTLCLLLGVYCGQLVTEFYSGQKPSLRRAYADGFVPPKITIQMPVYKEGMESVIIPTVKSLQAAISFYELRGGSA NLMICDDGLRAGLSAEEVSKRRAFYHDNDIGWVARPKHNGDEGFVRKGKFKKASNMNFALNASQKVEAYLQEMVD AKVASGQSDLVDEADEADMYKSALARVLEENPLVWAEGDIRIGEIILLVDSDTRVPVDCLLYAAAELFLSPEVGI IQHATGVMQVSHDYFENAITYFTNLVYTAISFSISSGESAPFVGHNAFLRWGAIQDVCPEEVEYTPYWSESHVSE DFDIALRLQMKNFIIRVASYHGNGFKEGVSLTVYDEIMRWQKYSYGVSEMIFHPLHRWLFRGPFTPLFYTFLGSD IMYSSKISILAYMCSYYALGAALPLSVMNYFIVGWFRDELASVYLTSWNVFLSLVVVFNLASPVALAVYRYRTGE RSLLGALFENFKWMPAMTTFFGGISFHIGAALLAHLFHVDMQWGATSKEKEDSNFFQEIPRIFRTFKIMYLVLFL IAGAMIYLGIFAPPDWAITDFSVIIPLSLNLGFHALVPLVLNPSLMIFHY* |
Coding | >Hirsu2|3837 ATGGTGAGCTACCTTCACCGGAGGGCCATCGCCAGCGGCTGGATACCCCCGGACTCGGCCCGGAACCACGACGAC TGCCTGGGCGTCCTGCTGCGGCGCTCCCGCGGCAGCTACGTCACCGCCCCGGACCCTGTCCACGCCGTCCTCCTC GATGCCTGCCTCCGGCTGAACCTGGCGGTTGCGGTTACCCTTCGGCCGCAGATGCTTGACGGGATCCTCCGCTCG CTGGCACCGGGCCAGGCCGAACTCAGGTTCAAGGGTGGCTCGCAGATCCAGGTCGTCGAGTCGCTGGCCTCGGTC AACTCGTCCAACATCAAGAAGTTCCAGTACGCCTTAGTCTCTCGTCAAGAGCACCTAGTCCTCGCGTGGCATGAT GATTTGGAGCGTATTATTCCGATGGCCACGCAGGTCGAGGAGAAGCTGCTTTCGCTGGTCTGGGGAGAGGGCAAG CTGCCGTTCAACATCGGCCTGCCCAGCGGCGCTCCCTCCATCATGTCTTCCGGCATGTCCAGCCCCAACGGCACA ATGACGCCGGCGCTGGAGAAGGCCGGTGCCAAGATCCAAATAAGCGAGAGCACAGAAGAGCTGGAAGAGGACTCG GGCTTTGAGCGGCCCGAGTCGGTTGAAAGGCCCGTCGCCCGCGCGAGCGCCGTCTTCATCGGCCTCGCCATGTGC TTAACGCTTTGCCTGTTGCTAGGTGTCTACTGCGGCCAGCTCGTAACTGAATTTTACAGTGGCCAAAAACCTTCG CTGCGGCGCGCCTACGCAGACGGCTTCGTGCCGCCCAAGATCACCATCCAGATGCCCGTCTACAAGGAGGGCATG GAGTCGGTCATCATCCCGACCGTCAAAAGTTTGCAAGCCGCCATCTCGTTCTACGAGCTCCGCGGCGGCTCTGCC AATCTCATGATTTGTGACGACGGTTTGAGAGCCGGCCTCTCAGCTGAAGAGGTTTCGAAGCGACGAGCCTTCTAC CACGACAATGACATCGGCTGGGTAGCGCGACCCAAGCACAACGGCGACGAGGGCTTCGTGCGCAAAGGGAAATTC AAAAAAGCCAGCAACATGAACTTCGCCCTCAACGCGTCTCAAAAAGTCGAGGCGTACTTGCAGGAGATGGTCGAC GCAAAGGTCGCCTCGGGCCAGTCCGACCTGGTCGACGAGGCCGACGAGGCCGACATGTACAAGTCGGCGCTGGCG CGCGTGCTCGAGGAGAACCCGCTGGTATGGGCCGAGGGCGACATCCGGATCGGCGAGATCATCCTCCTCGTCGAC TCCGACACCCGCGTGCCGGTCGACTGCCTGCTCTACGCCGCGGCCGAACTCTTTCTCTCGCCCGAGGTCGGCATA ATCCAGCACGCCACGGGTGTGATGCAAGTTAGCCACGATTATTTCGAGAACGCCATTACCTACTTTACCAACCTG GTCTATACCGCCATCAGCTTCTCTATTAGTTCGGGGGAGTCTGCTCCTTTCGTGGGCCATAACGCCTTTCTCCGA TGGGGAGCCATCCAGGACGTATGCCCGGAAGAGGTCGAGTACACGCCGTATTGGAGTGAGAGTCACGTCTCTGAA GACTTCGATATCGCGCTACGATTACAAATGAAAAATTTCATCATCCGGGTGGCGAGTTACCACGGCAATGGGTTC AAGGAGGGCGTATCGCTCACGGTTTACGACGAGATCATGCGGTGGCAAAAGTACTCGTACGGCGTCAGCGAGATG ATCTTCCACCCCTTGCACCGCTGGCTCTTCCGGGGGCCCTTCACGCCGCTCTTCTACACCTTCCTGGGCTCCGAC ATCATGTACTCGTCCAAGATCTCGATCCTGGCGTACATGTGCTCGTACTACGCGCTCGGGGCGGCGCTGCCGCTG TCGGTCATGAACTACTTCATCGTCGGCTGGTTCCGCGACGAGCTGGCGTCGGTCTACCTGACGTCGTGGAACGTC TTCCTCTCGCTCGTCGTCGTCTTCAACCTGGCCAGCCCCGTGGCGCTGGCCGTCTACCGGTACCGCACGGGCGAG CGCTCGCTGCTGGGCGCGCTGTTCGAGAACTTCAAATGGATGCCGGCGATGACGACCTTCTTCGGCGGGATCAGT TTCCACATCGGCGCCGCCCTGCTCGCCCACCTCTTCCACGTCGACATGCAGTGGGGCGCCACGTCCAAGGAGAAG GAGGACAGCAACTTCTTCCAGGAGATACCGCGCATCTTCCGCACCTTCAAGATCATGTACCTGGTGCTTTTCCTC ATTGCCGGCGCCATGATCTACCTCGGCATCTTTGCGCCGCCCGACTGGGCCATCACCGACTTCAGCGTCATCATA CCGCTCTCTCTCAACCTCGGCTTCCACGCGCTCGTCCCCCTGGTTTTGAATCCGAGTCTTATGATCTTTCACTAT TAG |
Transcript | >Hirsu2|3837 ATGGTGAGCTACCTTCACCGGAGGGCCATCGCCAGCGGCTGGATACCCCCGGACTCGGCCCGGAACCACGACGAC TGCCTGGGCGTCCTGCTGCGGCGCTCCCGCGGCAGCTACGTCACCGCCCCGGACCCTGTCCACGCCGTCCTCCTC GATGCCTGCCTCCGGCTGAACCTGGCGGTTGCGGTTACCCTTCGGCCGCAGATGCTTGACGGGATCCTCCGCTCG CTGGCACCGGGCCAGGCCGAACTCAGGTTCAAGGGTGGCTCGCAGATCCAGGTCGTCGAGTCGCTGGCCTCGGTC AACTCGTCCAACATCAAGAAGTTCCAGTACGCCTTAGTCTCTCGTCAAGAGCACCTAGTCCTCGCGTGGCATGAT GATTTGGAGCGTATTATTCCGATGGCCACGCAGGTCGAGGAGAAGCTGCTTTCGCTGGTCTGGGGAGAGGGCAAG CTGCCGTTCAACATCGGCCTGCCCAGCGGCGCTCCCTCCATCATGTCTTCCGGCATGTCCAGCCCCAACGGCACA ATGACGCCGGCGCTGGAGAAGGCCGGTGCCAAGATCCAAATAAGCGAGAGCACAGAAGAGCTGGAAGAGGACTCG GGCTTTGAGCGGCCCGAGTCGGTTGAAAGGCCCGTCGCCCGCGCGAGCGCCGTCTTCATCGGCCTCGCCATGTGC TTAACGCTTTGCCTGTTGCTAGGTGTCTACTGCGGCCAGCTCGTAACTGAATTTTACAGTGGCCAAAAACCTTCG CTGCGGCGCGCCTACGCAGACGGCTTCGTGCCGCCCAAGATCACCATCCAGATGCCCGTCTACAAGGAGGGCATG GAGTCGGTCATCATCCCGACCGTCAAAAGTTTGCAAGCCGCCATCTCGTTCTACGAGCTCCGCGGCGGCTCTGCC AATCTCATGATTTGTGACGACGGTTTGAGAGCCGGCCTCTCAGCTGAAGAGGTTTCGAAGCGACGAGCCTTCTAC CACGACAATGACATCGGCTGGGTAGCGCGACCCAAGCACAACGGCGACGAGGGCTTCGTGCGCAAAGGGAAATTC AAAAAAGCCAGCAACATGAACTTCGCCCTCAACGCGTCTCAAAAAGTCGAGGCGTACTTGCAGGAGATGGTCGAC GCAAAGGTCGCCTCGGGCCAGTCCGACCTGGTCGACGAGGCCGACGAGGCCGACATGTACAAGTCGGCGCTGGCG CGCGTGCTCGAGGAGAACCCGCTGGTATGGGCCGAGGGCGACATCCGGATCGGCGAGATCATCCTCCTCGTCGAC TCCGACACCCGCGTGCCGGTCGACTGCCTGCTCTACGCCGCGGCCGAACTCTTTCTCTCGCCCGAGGTCGGCATA ATCCAGCACGCCACGGGTGTGATGCAAGTTAGCCACGATTATTTCGAGAACGCCATTACCTACTTTACCAACCTG GTCTATACCGCCATCAGCTTCTCTATTAGTTCGGGGGAGTCTGCTCCTTTCGTGGGCCATAACGCCTTTCTCCGA TGGGGAGCCATCCAGGACGTATGCCCGGAAGAGGTCGAGTACACGCCGTATTGGAGTGAGAGTCACGTCTCTGAA GACTTCGATATCGCGCTACGATTACAAATGAAAAATTTCATCATCCGGGTGGCGAGTTACCACGGCAATGGGTTC AAGGAGGGCGTATCGCTCACGGTTTACGACGAGATCATGCGGTGGCAAAAGTACTCGTACGGCGTCAGCGAGATG ATCTTCCACCCCTTGCACCGCTGGCTCTTCCGGGGGCCCTTCACGCCGCTCTTCTACACCTTCCTGGGCTCCGAC ATCATGTACTCGTCCAAGATCTCGATCCTGGCGTACATGTGCTCGTACTACGCGCTCGGGGCGGCGCTGCCGCTG TCGGTCATGAACTACTTCATCGTCGGCTGGTTCCGCGACGAGCTGGCGTCGGTCTACCTGACGTCGTGGAACGTC TTCCTCTCGCTCGTCGTCGTCTTCAACCTGGCCAGCCCCGTGGCGCTGGCCGTCTACCGGTACCGCACGGGCGAG CGCTCGCTGCTGGGCGCGCTGTTCGAGAACTTCAAATGGATGCCGGCGATGACGACCTTCTTCGGCGGGATCAGT TTCCACATCGGCGCCGCCCTGCTCGCCCACCTCTTCCACGTCGACATGCAGTGGGGCGCCACGTCCAAGGAGAAG GAGGACAGCAACTTCTTCCAGGAGATACCGCGCATCTTCCGCACCTTCAAGATCATGTACCTGGTGCTTTTCCTC ATTGCCGGCGCCATGATCTACCTCGGCATCTTTGCGCCGCCCGACTGGGCCATCACCGACTTCAGCGTCATCATA CCGCTCTCTCTCAACCTCGGCTTCCACGCGCTCGTCCCCCTGGTTTTGAATCCGAGTCTTATGATCTTTCACTAT TAG |
Gene | >Hirsu2|3837 ATGGTGAGCTACCTTCACCGGAGGGCCATCGCCAGCGGCTGGATACCCCCGGACTCGGCCCGGAACCACGACGAC TGCCTGGGCGTCCTGCTGCGGCGCTCCCGCGGCAGCTACGTCACCGCCCCGGACCCTGTCCACGCCGTCCTCCTC GATGCCTGCCTCCGGCTGAACCTGGCGGTTGCGGTTACCCTTCGGCCGCAGATGCTTGACGGGATCCTCCGCTCG CTGGCACCGGGCCAGGCCGAACTCAGGTTCAAGGGTGGCTCGCAGATCCAGGTCGTCGAGTCGCTGGCCTCGGTC AACTCGTCCAACATCAAGAAGTTCCAGTACGCCTTAGTCTCTCGTCAAGAGCACCTAGTCCTCGCGTGGCATGAT GATTTGGAGCGTATTATTCCGATGGCCACGCAGGTCGAGGAGAAGCTGCTTTCGCTGGTAAGTCCCCTTTATGTT TTACCCCTTTTCTTTCGACTGACGCGAATTTCCGTCTGCCAGGTCTGGGGAGAGGGCAAGCTGCCGTTCAACATC GGCCTGCCCAGCGGCGCTCCCTCCATCATGTCTTCCGGCATGTCCAGCCCCAACGGCACAATGACGCCGGCGCTG GAGAAGGCCGGTGCCAAGATCCAAATAAGCGAGAGCACAGAAGAGCTGGAAGAGGACTCGGGCTTTGAGCGGCCC GAGTCGGTTGAAAGGCCCGTCGCCCGCGCGAGCGCCGTCTTCATCGGCCTCGCCATGTGCTTAACGCTTTGCCTG TTGCTAGGTGTCTACTGCGGCCAGCTCGTAACTGAGTGCATCCTCGACGGCTCGTGGACCCGGCTAGCGCTCCTC CTCGCGGTTCCCCTCCTTGCACTGATCTCACTTTTTTTTTTCGTCATTTTGTGGACCGACCTTTTTCAACTTATT GGCCCGATTGGTGCTGCTGCCGCCAACTCTAGATTTTACAGTGGCCAAAAACCTTCGCTGCGGCGCGCCTACGCA GACGGCTTCGTGCCGCCCAAGATCACCATCCAGATGCCCGTCTACAAGGAGGGCATGGAGTCGGTCATCATCCCG ACCGTCAAAAGTTTGCAAGCCGCCATCTCGTTCTACGAGCTCCGCGGCGGCTCTGCCAATCTCATGATTTGTGAC GACGGTTTGAGAGCCGGCCTCTCAGCTGAAGAGGTTTCGAAGCGACGAGCCTTCTACCACGACAATGACATCGGC TGGGTAGCGCGACCCAAGCACAACGGCGACGAGGGCTTCGTGCGCAAAGGGAAATTCAAAAAAGCCAGCAACATG AACTTCGCCCTCAACGCGTCTCAAAAAGTCGAGGCGTACTTGCAGGAGATGGTCGACGCAAAGGTCGCCTCGGGC CAGTCCGACCTGGTCGACGAGGCCGACGAGGCCGACATGTACAAGTCGGCGCTGGCGCGCGTGCTCGAGGAGAAC CCGCTGGTATGGGCCGAGGGCGACATCCGGATCGGCGAGATCATCCTCCTCGTCGACTCCGACACCCGCGTGGTG AGTGCCTTGTCCTCCGTTGCTGCGACGGCAGCTGACTCGAGATGCAGCCGGTCGACTGCCTGCTCTACGCCGCGG CCGAACTCTTTCTCTCGCCCGAGGTCGGCATAATCCAGCACGCCACGGGTGTGATGCAAGTTAGCCACGATTATT TCGAGAACGCCATTACCTACTTTACCAACCTGGTCTATACCGCCATCAGCTTCTCTATTAGTTCGGGGGAGTCTG CTCCTTTCGTGGGCCATAACGCCTTTCTCCGATGGGGAGGTGAGTGAGTTCCTAGTTCATGCCCCCTTTTCGGCC CCCTTTCTGGCCTCTCGGCCGTCTGCCCCGCTTTTCGGCCGTCTGGAACTGCCCGCGATGCACATAGCCGGCAGC ACGTCGTCCGCGGCTAGGTGGCTAATTTGGATACACCCCGTAGCCATCCAGGACGTATGCCCGGAAGAGGTCGAG TACACGCCGTATTGGAGTGAGAGTCACGTCTCTGAAGACTTCGATATCGCGCTACGATTACAAATGAAAAATTTC ATCATCCGGGTGGCGAGTTACCACGGCAATGGGTTCAAGGAGGGCGTATCGCTCACGGTTTACGACGAGATCATG CGGTGGCAAAAGTACTCGTACGGCGTCAGCGAGATGATCTTCCACCCCTTGCACCGCTGGCTCTTCCGGGGGCCC TTCACGCCGCTCTTCTACACCTTCCTGGGCTCCGACATCATGTACTCGTCCAAGATCTCGATCCTGGCGTACATG TGCTCGTACTACGCGCTCGGGGCGGCGCTGCCGCTGTCGGTCATGAACTACTTCATCGTCGGCTGGTTCCGCGAC GAGCTGGCGTCGGTCTACCTGACGTCGTGGAACGTCTTCCTCTCGCTCGTCGTCGTCTTCAACCTGGCCAGCCCC GTGGCGCTGGCCGTCTACCGGTACCGCACGGGCGAGCGCTCGCTGCTGGGCGCGCTGTTCGAGAACTTCAAATGG ATGCCGGCGATGACGACCTTCTTCGGCGGGATCAGTTTCCACATCGGCGCCGCCCTGCTCGCCCACCTCTTCCAC GTCGACATGCAGTGGGGCGCCACGTCCAAGGAGAAGGAGGACAGCAACTTCTTCCAGGAGATACCGCGCATCTTC CGCACCTTCAAGATCATGTACCTGGTGCTTTTCCTCATTGCCGGCGCCATGATCTACCTCGGCATCTTTGCGCCG CCCGACTGGGCCATCACCGACTTCAGCGTCATCATACCGCTCTCTCTCAACCTCGGCTTCCACGCGCTCGTCCCC CTGGTTTTGAATCCGAGTCTTATGATCTTTCACTATTAG |