© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3830 |
| Gene name | |
| Location | Contig_202:26023..26403 |
| Strand | - |
| Gene length (bp) | 380 |
| Transcript length (bp) | 294 |
| Coding sequence length (bp) | 294 |
| Protein length (aa) | 98 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09730|SFT1_SCHPO | Protein transport protein sft1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sft1 PE=3 SV=1 | 10 | 97 | 9.0E-11 |
| sp|P43682|SFT1_YEAST | Protein transport protein SFT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SFT1 PE=1 SV=1 | 6 | 96 | 5.0E-09 |
| sp|Q9NYM9|BET1L_HUMAN | BET1-like protein OS=Homo sapiens GN=BET1L PE=1 SV=1 | 8 | 91 | 2.0E-06 |
| sp|Q5RBX2|BET1L_PONAB | BET1-like protein OS=Pongo abelii GN=BET1L PE=3 SV=1 | 8 | 91 | 3.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 15 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 73 | 95 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3830 MSEAYERERQNNARLDELSAKVSALRGVTIDIYDNARTQDVIDNTSDTFSSMATQMKGSAGRLTRMAASGNKVAI LKLSGIVIALFLVLYYGLKIFF* |
| Coding | >Hirsu2|3830 ATGTCGGAAGCCTACGAGCGCGAGCGTCAGAACAACGCCCGCCTCGATGAGCTCTCGGCCAAGGTCTCTGCCCTT CGCGGCGTCACCATCGACATCTACGACAATGCGCGTACCCAGGATGTCATCGACAATACCTCCGATACCTTCTCC TCCATGGCGACGCAAATGAAGGGCTCCGCCGGCCGCCTCACCCGCATGGCCGCCTCCGGCAACAAGGTCGCCATC TTGAAGCTTTCGGGCATCGTCATCGCCCTGTTTCTTGTCCTCTACTACGGCCTGAAGATATTCTTCTAG |
| Transcript | >Hirsu2|3830 ATGTCGGAAGCCTACGAGCGCGAGCGTCAGAACAACGCCCGCCTCGATGAGCTCTCGGCCAAGGTCTCTGCCCTT CGCGGCGTCACCATCGACATCTACGACAATGCGCGTACCCAGGATGTCATCGACAATACCTCCGATACCTTCTCC TCCATGGCGACGCAAATGAAGGGCTCCGCCGGCCGCCTCACCCGCATGGCCGCCTCCGGCAACAAGGTCGCCATC TTGAAGCTTTCGGGCATCGTCATCGCCCTGTTTCTTGTCCTCTACTACGGCCTGAAGATATTCTTCTAG |
| Gene | >Hirsu2|3830 ATGTCGGAAGCCTACGAGCGCGAGCGTCAGAACAACGCCCGCCTCGATGAGCTCTCGGCCAAGGTCTCTGCCCTT CGCGGCGTCACCATCGACATCTACGACAATGCGCGTACCCAGGATGTCATCGACAATACCGTCCGTCCTCGCCTT TCCCCTACTATACCTCCACGCGTCCCTTCGCCCGGCGGAGTGTCGATTCCCTGCTGACAACGCGCTCCCAGTCCG ATACCTTCTCCTCCATGGCGACGCAAATGAAGGGCTCCGCCGGCCGCCTCACCCGCATGGCCGCCTCCGGCAACA AGGTCGCCATCTTGAAGCTTTCGGGCATCGTCATCGCCCTGTTTCTTGTCCTCTACTACGGCCTGAAGATATTCT TCTAG |