Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|3827
Gene name
Location	Contig_202:18329..19082
Strand	-
Gene length (bp)	753
Transcript length (bp)	753
Coding sequence length (bp)	753
Protein length (aa)	251

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00501	AMP-binding	AMP-binding enzyme	4.3E-19	46	217

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P29698\|ENTF_SHIFL	Enterobactin synthase component F OS=Shigella flexneri GN=entF PE=3 SV=2	52	226	4.0E-06
sp\|Q8XBV9\|ENTF_ECO57	Enterobactin synthase component F OS=Escherichia coli O157:H7 GN=entF PE=3 SV=1	52	226	9.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 34	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|3827 MERADEIGHFLQKHGAPHFVTLGVSSDMSPANGFDVTIDKCLGLDASGPGVVMFTSGTSTGIPKAAVLPRQCLVQ NRPPKLGEATLSYRPPYWRGGFASLIGPLLSGMKLYSVVQNAPTEAIWDALRHHHITNLVFNPTLLRQMKEVYTA KLNTLADAEREAYVNGFRNLGRIRCSGAFLAPPLLEFWTGLTGLPLKNAYGSTECGGGVTEVNVNRQSKAKVRAA TARRCRRDEALDLTKYVNSTRSVNW*
Coding	>Hirsu2\|3827 ATGGAACGTGCCGATGAAATCGGCCACTTCTTGCAGAAGCATGGAGCGCCGCATTTCGTCACACTTGGGGTCTCC AGCGACATGTCACCTGCAAACGGCTTCGATGTCACGATTGATAAGTGTCTCGGCCTGGACGCCAGCGGTCCAGGT GTGGTCATGTTCACCTCTGGGACCTCGACCGGAATCCCAAAGGCAGCAGTGCTACCGAGGCAGTGTCTGGTCCAG AACCGCCCTCCGAAGCTGGGCGAAGCGACTCTTAGCTACAGGCCTCCGTATTGGCGTGGCGGATTTGCCAGCCTG ATTGGGCCGCTCTTGTCCGGCATGAAGCTGTACTCGGTTGTGCAGAATGCCCCGACCGAGGCCATTTGGGACGCT CTGCGGCATCATCACATCACCAACCTCGTTTTCAATCCCACTTTGCTTCGGCAGATGAAGGAGGTCTACACTGCG AAACTGAACACCCTCGCCGACGCGGAGAGGGAGGCCTACGTCAACGGGTTCAGGAACCTGGGCAGGATTCGATGT AGCGGTGCCTTTCTTGCGCCGCCCTTGTTGGAGTTCTGGACCGGCCTGACGGGACTGCCGCTCAAGAACGCGTAC GGCTCGACCGAGTGCGGCGGAGGCGTGACGGAGGTCAACGTCAACAGGCAGTCGAAAGCCAAAGTAAGAGCAGCT ACAGCCAGACGATGCCGACGCGATGAAGCTTTGGATTTGACCAAATACGTCAATAGCACTCGGTCGGTCAACTGG TAA
Transcript	>Hirsu2\|3827 ATGGAACGTGCCGATGAAATCGGCCACTTCTTGCAGAAGCATGGAGCGCCGCATTTCGTCACACTTGGGGTCTCC AGCGACATGTCACCTGCAAACGGCTTCGATGTCACGATTGATAAGTGTCTCGGCCTGGACGCCAGCGGTCCAGGT GTGGTCATGTTCACCTCTGGGACCTCGACCGGAATCCCAAAGGCAGCAGTGCTACCGAGGCAGTGTCTGGTCCAG AACCGCCCTCCGAAGCTGGGCGAAGCGACTCTTAGCTACAGGCCTCCGTATTGGCGTGGCGGATTTGCCAGCCTG ATTGGGCCGCTCTTGTCCGGCATGAAGCTGTACTCGGTTGTGCAGAATGCCCCGACCGAGGCCATTTGGGACGCT CTGCGGCATCATCACATCACCAACCTCGTTTTCAATCCCACTTTGCTTCGGCAGATGAAGGAGGTCTACACTGCG AAACTGAACACCCTCGCCGACGCGGAGAGGGAGGCCTACGTCAACGGGTTCAGGAACCTGGGCAGGATTCGATGT AGCGGTGCCTTTCTTGCGCCGCCCTTGTTGGAGTTCTGGACCGGCCTGACGGGACTGCCGCTCAAGAACGCGTAC GGCTCGACCGAGTGCGGCGGAGGCGTGACGGAGGTCAACGTCAACAGGCAGTCGAAAGCCAAAGTAAGAGCAGCT ACAGCCAGACGATGCCGACGCGATGAAGCTTTGGATTTGACCAAATACGTCAATAGCACTCGGTCGGTCAACTGG TAA
Gene	>Hirsu2\|3827 ATGGAACGTGCCGATGAAATCGGCCACTTCTTGCAGAAGCATGGAGCGCCGCATTTCGTCACACTTGGGGTCTCC AGCGACATGTCACCTGCAAACGGCTTCGATGTCACGATTGATAAGTGTCTCGGCCTGGACGCCAGCGGTCCAGGT GTGGTCATGTTCACCTCTGGGACCTCGACCGGAATCCCAAAGGCAGCAGTGCTACCGAGGCAGTGTCTGGTCCAG AACCGCCCTCCGAAGCTGGGCGAAGCGACTCTTAGCTACAGGCCTCCGTATTGGCGTGGCGGATTTGCCAGCCTG ATTGGGCCGCTCTTGTCCGGCATGAAGCTGTACTCGGTTGTGCAGAATGCCCCGACCGAGGCCATTTGGGACGCT CTGCGGCATCATCACATCACCAACCTCGTTTTCAATCCCACTTTGCTTCGGCAGATGAAGGAGGTCTACACTGCG AAACTGAACACCCTCGCCGACGCGGAGAGGGAGGCCTACGTCAACGGGTTCAGGAACCTGGGCAGGATTCGATGT AGCGGTGCCTTTCTTGCGCCGCCCTTGTTGGAGTTCTGGACCGGCCTGACGGGACTGCCGCTCAAGAACGCGTAC GGCTCGACCGAGTGCGGCGGAGGCGTGACGGAGGTCAACGTCAACAGGCAGTCGAAAGCCAAAGTAAGAGCAGCT ACAGCCAGACGATGCCGACGCGATGAAGCTTTGGATTTGACCAAATACGTCAATAGCACTCGGTCGGTCAACTGG TAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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