Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3826
Gene name
LocationContig_202:17559..18130
Strand-
Gene length (bp)571
Transcript length (bp)498
Coding sequence length (bp)498
Protein length (aa) 166

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13193 AMP-binding_C AMP-binding enzyme C-terminal domain 1.4E-06 28 109

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Peroxisomal targeting signal 0.4929 0.3216 0.0813 0.1764 0.1856 0.0961 0.1403 0.0521 0.0718 0.4171

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7016
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|633
Ophiocordyceps australis map64 (Brazil) OphauB2|1191
Ophiocordyceps subramaniannii Hirsu2|3826 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3826
MGHVVGDEYVFEGRKTDDFIERVPRLAVEEAISSLPYVSEAHVLRVPDHETRSVCGALVRIKENSIPAGDMSIRR
LHADLDDTLPAYMRPYLLRILKDGEEVPCTASQKPIRSEMLRRFFGVMDFWNSDTASPEVEVWHERFAPADRIEG
ANPRPWDWATWQTSV*
Coding >Hirsu2|3826
ATGGGGCACGTAGTTGGGGACGAGTACGTCTTTGAAGGACGCAAAACCGACGATTTCATCGAGCGCGTTCCCCGG
CTTGCCGTGGAGGAAGCCATCAGCAGCTTGCCCTATGTCTCCGAGGCCCACGTGCTCCGAGTTCCGGACCACGAG
ACGAGGTCCGTGTGCGGAGCGCTCGTTCGCATCAAGGAGAACAGCATCCCGGCCGGGGACATGTCCATCAGGCGT
CTTCACGCGGACCTCGACGACACGTTGCCCGCGTACATGCGTCCGTACCTGCTGCGAATCCTCAAGGATGGCGAG
GAGGTCCCTTGCACGGCGTCGCAAAAGCCCATCAGATCCGAGATGCTGAGGAGATTCTTTGGCGTCATGGACTTT
TGGAACTCGGACACGGCCAGCCCCGAAGTCGAGGTTTGGCATGAGCGCTTCGCGCCCGCCGACCGGATCGAGGGC
GCCAATCCGAGGCCGTGGGATTGGGCAACATGGCAAACGTCAGTCTGA
Transcript >Hirsu2|3826
ATGGGGCACGTAGTTGGGGACGAGTACGTCTTTGAAGGACGCAAAACCGACGATTTCATCGAGCGCGTTCCCCGG
CTTGCCGTGGAGGAAGCCATCAGCAGCTTGCCCTATGTCTCCGAGGCCCACGTGCTCCGAGTTCCGGACCACGAG
ACGAGGTCCGTGTGCGGAGCGCTCGTTCGCATCAAGGAGAACAGCATCCCGGCCGGGGACATGTCCATCAGGCGT
CTTCACGCGGACCTCGACGACACGTTGCCCGCGTACATGCGTCCGTACCTGCTGCGAATCCTCAAGGATGGCGAG
GAGGTCCCTTGCACGGCGTCGCAAAAGCCCATCAGATCCGAGATGCTGAGGAGATTCTTTGGCGTCATGGACTTT
TGGAACTCGGACACGGCCAGCCCCGAAGTCGAGGTTTGGCATGAGCGCTTCGCGCCCGCCGACCGGATCGAGGGC
GCCAATCCGAGGCCGTGGGATTGGGCAACATGGCAAACGTCAGTCTGA
Gene >Hirsu2|3826
ATGGGGCACGTAGTTGGGGACGAGTACGTCTTTGAAGGACGCAAAACCGACGATTGTGAGTCGCTCGGATCCTGT
CGCCCGACGTCAATCTGCCGGAGGTGGCTCACATTCGTCCGGCACGTACACAGTCATCGAGCGCGTTCCCCGGCT
TGCCGTGGAGGAAGCCATCAGCAGCTTGCCCTATGTCTCCGAGGCCCACGTGCTCCGAGTTCCGGACCACGAGAC
GAGGTCCGTGTGCGGAGCGCTCGTTCGCATCAAGGAGAACAGCATCCCGGCCGGGGACATGTCCATCAGGCGTCT
TCACGCGGACCTCGACGACACGTTGCCCGCGTACATGCGTCCGTACCTGCTGCGAATCCTCAAGGATGGCGAGGA
GGTCCCTTGCACGGCGTCGCAAAAGCCCATCAGATCCGAGATGCTGAGGAGATTCTTTGGCGTCATGGACTTTTG
GAACTCGGACACGGCCAGCCCCGAAGTCGAGGTTTGGCATGAGCGCTTCGCGCCCGCCGACCGGATCGAGGGCGC
CAATCCGAGGCCGTGGGATTGGGCAACATGGCAAACGTCAGTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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