Protein ID | Hirsu2|3826 |
Gene name | |
Location | Contig_202:17559..18130 |
Strand | - |
Gene length (bp) | 571 |
Transcript length (bp) | 498 |
Coding sequence length (bp) | 498 |
Protein length (aa) | 166 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13193 | AMP-binding_C | AMP-binding enzyme C-terminal domain | 1.4E-06 | 28 | 109 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | Peroxisomal targeting signal | 0.4929 | 0.3216 | 0.0813 | 0.1764 | 0.1856 | 0.0961 | 0.1403 | 0.0521 | 0.0718 | 0.4171 |
Orthofinder run ID | 4 |
Orthogroup | 7016 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps australis 1348a (Ghana) | OphauG2|633 |
Ophiocordyceps australis map64 (Brazil) | OphauB2|1191 |
Ophiocordyceps subramaniannii | Hirsu2|3826 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3826 MGHVVGDEYVFEGRKTDDFIERVPRLAVEEAISSLPYVSEAHVLRVPDHETRSVCGALVRIKENSIPAGDMSIRR LHADLDDTLPAYMRPYLLRILKDGEEVPCTASQKPIRSEMLRRFFGVMDFWNSDTASPEVEVWHERFAPADRIEG ANPRPWDWATWQTSV* |
Coding | >Hirsu2|3826 ATGGGGCACGTAGTTGGGGACGAGTACGTCTTTGAAGGACGCAAAACCGACGATTTCATCGAGCGCGTTCCCCGG CTTGCCGTGGAGGAAGCCATCAGCAGCTTGCCCTATGTCTCCGAGGCCCACGTGCTCCGAGTTCCGGACCACGAG ACGAGGTCCGTGTGCGGAGCGCTCGTTCGCATCAAGGAGAACAGCATCCCGGCCGGGGACATGTCCATCAGGCGT CTTCACGCGGACCTCGACGACACGTTGCCCGCGTACATGCGTCCGTACCTGCTGCGAATCCTCAAGGATGGCGAG GAGGTCCCTTGCACGGCGTCGCAAAAGCCCATCAGATCCGAGATGCTGAGGAGATTCTTTGGCGTCATGGACTTT TGGAACTCGGACACGGCCAGCCCCGAAGTCGAGGTTTGGCATGAGCGCTTCGCGCCCGCCGACCGGATCGAGGGC GCCAATCCGAGGCCGTGGGATTGGGCAACATGGCAAACGTCAGTCTGA |
Transcript | >Hirsu2|3826 ATGGGGCACGTAGTTGGGGACGAGTACGTCTTTGAAGGACGCAAAACCGACGATTTCATCGAGCGCGTTCCCCGG CTTGCCGTGGAGGAAGCCATCAGCAGCTTGCCCTATGTCTCCGAGGCCCACGTGCTCCGAGTTCCGGACCACGAG ACGAGGTCCGTGTGCGGAGCGCTCGTTCGCATCAAGGAGAACAGCATCCCGGCCGGGGACATGTCCATCAGGCGT CTTCACGCGGACCTCGACGACACGTTGCCCGCGTACATGCGTCCGTACCTGCTGCGAATCCTCAAGGATGGCGAG GAGGTCCCTTGCACGGCGTCGCAAAAGCCCATCAGATCCGAGATGCTGAGGAGATTCTTTGGCGTCATGGACTTT TGGAACTCGGACACGGCCAGCCCCGAAGTCGAGGTTTGGCATGAGCGCTTCGCGCCCGCCGACCGGATCGAGGGC GCCAATCCGAGGCCGTGGGATTGGGCAACATGGCAAACGTCAGTCTGA |
Gene | >Hirsu2|3826 ATGGGGCACGTAGTTGGGGACGAGTACGTCTTTGAAGGACGCAAAACCGACGATTGTGAGTCGCTCGGATCCTGT CGCCCGACGTCAATCTGCCGGAGGTGGCTCACATTCGTCCGGCACGTACACAGTCATCGAGCGCGTTCCCCGGCT TGCCGTGGAGGAAGCCATCAGCAGCTTGCCCTATGTCTCCGAGGCCCACGTGCTCCGAGTTCCGGACCACGAGAC GAGGTCCGTGTGCGGAGCGCTCGTTCGCATCAAGGAGAACAGCATCCCGGCCGGGGACATGTCCATCAGGCGTCT TCACGCGGACCTCGACGACACGTTGCCCGCGTACATGCGTCCGTACCTGCTGCGAATCCTCAAGGATGGCGAGGA GGTCCCTTGCACGGCGTCGCAAAAGCCCATCAGATCCGAGATGCTGAGGAGATTCTTTGGCGTCATGGACTTTTG GAACTCGGACACGGCCAGCCCCGAAGTCGAGGTTTGGCATGAGCGCTTCGCGCCCGCCGACCGGATCGAGGGCGC CAATCCGAGGCCGTGGGATTGGGCAACATGGCAAACGTCAGTCTGA |