© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3807 |
| Gene name | |
| Location | Contig_2013:2218..2890 |
| Strand | - |
| Gene length (bp) | 672 |
| Transcript length (bp) | 591 |
| Coding sequence length (bp) | 591 |
| Protein length (aa) | 197 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4B3I5|A3024_ARTBC | Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 | 36 | 146 | 1.0E-12 |
| sp|P0DN32|CUPR1_ARTBC | Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 | 4 | 191 | 1.0E-11 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular|Cell membrane | 0.0604 | 0.0335 | 0.744 | 0.6932 | 0.1002 | 0.01 | 0.2367 | 0.146 | 0.1356 | 0.0064 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.999317 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 173 | 195 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 6115 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3807 MRSVQTFVAAVAAMAGCVAGADGNVIRVTAQSDNSFNPSTVIAKRGDVIEFHFQPNNHSVVSGSYESPCSPMQLG SGFYSGFLSCQGGEAGRIFRVTVRSEDPMPFYSSQGDECPRGMVGLINPNGQKTLDEYRTRAKTLSRAVTPGTTP YGGELEENTDPSAVRNPDGTVRAAAGALAVPVTGLAAAVAMALLMA* |
| Coding | >Hirsu2|3807 ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGGGAGGATCTTCCGCGTCACGGTCCGGAGC GAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAACCCCAAC GGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACCACGCCC TACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCCGCCGCC GGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA |
| Transcript | >Hirsu2|3807 ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGGGAGGATCTTCCGCGTCACGGTCCGGAGC GAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAACCCCAAC GGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACCACGCCC TACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCCGCCGCC GGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA |
| Gene | >Hirsu2|3807 ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGTGCGTTGTCTTCCCTCTTCTTCCACTTTT CCCGCTCTCCGTGCGCTGACAAGGTTCCGTCGGCTTGCCGCCCGGTTCCAGGGGAGGATCTTCCGCGTCACGGTC CGGAGCGAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAAC CCCAACGGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACC ACGCCCTACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCC GCCGCCGGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA |