Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3807
Gene name
LocationContig_2013:2218..2890
Strand-
Gene length (bp)672
Transcript length (bp)591
Coding sequence length (bp)591
Protein length (aa) 197

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B3I5|A3024_ARTBC Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 36 146 1.0E-12
sp|P0DN32|CUPR1_ARTBC Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 4 191 1.0E-11

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular|Cell membrane 0.0604 0.0335 0.744 0.6932 0.1002 0.01 0.2367 0.146 0.1356 0.0064

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.999317

Transmembrane Domains

Domain # Start End Length
1 173 195 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6115
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|03920
Ophiocordyceps kimflemingae Ophio5|8129
Ophiocordyceps subramaniannii Hirsu2|3807 (this protein)
Ophiocordyceps subramaniannii Hirsu2|4242

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3807
MRSVQTFVAAVAAMAGCVAGADGNVIRVTAQSDNSFNPSTVIAKRGDVIEFHFQPNNHSVVSGSYESPCSPMQLG
SGFYSGFLSCQGGEAGRIFRVTVRSEDPMPFYSSQGDECPRGMVGLINPNGQKTLDEYRTRAKTLSRAVTPGTTP
YGGELEENTDPSAVRNPDGTVRAAAGALAVPVTGLAAAVAMALLMA*
Coding >Hirsu2|3807
ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC
ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG
TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC
AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGGGAGGATCTTCCGCGTCACGGTCCGGAGC
GAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAACCCCAAC
GGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACCACGCCC
TACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCCGCCGCC
GGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA
Transcript >Hirsu2|3807
ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC
ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG
TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC
AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGGGAGGATCTTCCGCGTCACGGTCCGGAGC
GAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAACCCCAAC
GGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACCACGCCC
TACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCCGCCGCC
GGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA
Gene >Hirsu2|3807
ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC
ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG
TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC
AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGTGCGTTGTCTTCCCTCTTCTTCCACTTTT
CCCGCTCTCCGTGCGCTGACAAGGTTCCGTCGGCTTGCCGCCCGGTTCCAGGGGAGGATCTTCCGCGTCACGGTC
CGGAGCGAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAAC
CCCAACGGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACC
ACGCCCTACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCC
GCCGCCGGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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