Protein ID | Hirsu2|3807 |
Gene name | |
Location | Contig_2013:2218..2890 |
Strand | - |
Gene length (bp) | 672 |
Transcript length (bp) | 591 |
Coding sequence length (bp) | 591 |
Protein length (aa) | 197 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4B3I5|A3024_ARTBC | Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 | 36 | 146 | 1.0E-12 |
sp|P0DN32|CUPR1_ARTBC | Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 | 4 | 191 | 1.0E-11 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular|Cell membrane | 0.0604 | 0.0335 | 0.744 | 0.6932 | 0.1002 | 0.01 | 0.2367 | 0.146 | 0.1356 | 0.0064 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999317 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 173 | 195 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 6115 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3807 MRSVQTFVAAVAAMAGCVAGADGNVIRVTAQSDNSFNPSTVIAKRGDVIEFHFQPNNHSVVSGSYESPCSPMQLG SGFYSGFLSCQGGEAGRIFRVTVRSEDPMPFYSSQGDECPRGMVGLINPNGQKTLDEYRTRAKTLSRAVTPGTTP YGGELEENTDPSAVRNPDGTVRAAAGALAVPVTGLAAAVAMALLMA* |
Coding | >Hirsu2|3807 ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGGGAGGATCTTCCGCGTCACGGTCCGGAGC GAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAACCCCAAC GGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACCACGCCC TACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCCGCCGCC GGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA |
Transcript | >Hirsu2|3807 ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGGGAGGATCTTCCGCGTCACGGTCCGGAGC GAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAACCCCAAC GGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACCACGCCC TACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCCGCCGCC GGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA |
Gene | >Hirsu2|3807 ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGTGCGTTGTCTTCCCTCTTCTTCCACTTTT CCCGCTCTCCGTGCGCTGACAAGGTTCCGTCGGCTTGCCGCCCGGTTCCAGGGGAGGATCTTCCGCGTCACGGTC CGGAGCGAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAAC CCCAACGGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACC ACGCCCTACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCC GCCGCCGGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA |