Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3807
Gene name
LocationContig_2013:2218..2890
Strand-
Gene length (bp)672
Transcript length (bp)591
Coding sequence length (bp)591
Protein length (aa) 197

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B3I5|A3024_ARTBC Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 36 146 1.0E-12
sp|P0DN32|CUPR1_ARTBC Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 4 191 1.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 173 195 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3807
MRSVQTFVAAVAAMAGCVAGADGNVIRVTAQSDNSFNPSTVIAKRGDVIEFHFQPNNHSVVSGSYESPCSPMQLG
SGFYSGFLSCQGGEAGRIFRVTVRSEDPMPFYSSQGDECPRGMVGLINPNGQKTLDEYRTRAKTLSRAVTPGTTP
YGGELEENTDPSAVRNPDGTVRAAAGALAVPVTGLAAAVAMALLMA*
Coding >Hirsu2|3807
ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC
ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG
TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC
AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGGGAGGATCTTCCGCGTCACGGTCCGGAGC
GAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAACCCCAAC
GGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACCACGCCC
TACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCCGCCGCC
GGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA
Transcript >Hirsu2|3807
ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC
ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG
TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC
AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGGGAGGATCTTCCGCGTCACGGTCCGGAGC
GAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAACCCCAAC
GGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACCACGCCC
TACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCCGCCGCC
GGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA
Gene >Hirsu2|3807
ATGCGCTCCGTCCAGACGTTCGTGGCGGCCGTGGCGGCCATGGCGGGCTGCGTGGCCGGCGCCGACGGCAATGTC
ATCCGCGTCACCGCCCAGAGCGACAACAGCTTCAACCCCAGCACCGTCATCGCCAAGCGCGGCGATGTCATCGAG
TTCCACTTCCAGCCCAACAACCACAGCGTCGTATCCGGCTCCTACGAGAGCCCTTGCTCGCCCATGCAGCTTGGC
AGCGGCTTCTACTCGGGCTTTCTGTCCTGCCAAGGGGGCGAGGCTGTGCGTTGTCTTCCCTCTTCTTCCACTTTT
CCCGCTCTCCGTGCGCTGACAAGGTTCCGTCGGCTTGCCGCCCGGTTCCAGGGGAGGATCTTCCGCGTCACGGTC
CGGAGCGAGGACCCGATGCCCTTCTACTCGTCGCAGGGGGACGAGTGCCCGCGCGGCATGGTCGGCCTCATCAAC
CCCAACGGCCAGAAGACGCTGGACGAGTACCGCACCCGGGCCAAGACGCTGTCCCGCGCCGTCACCCCCGGCACC
ACGCCCTACGGCGGCGAGCTGGAGGAGAACACGGACCCGAGCGCGGTCAGGAACCCCGACGGCACCGTCCGCGCC
GCCGCCGGCGCCCTGGCCGTGCCCGTCACCGGCCTGGCCGCTGCCGTCGCCATGGCCCTCCTGATGGCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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