© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3805 |
| Gene name | |
| Location | Contig_2011:2860..3985 |
| Strand | - |
| Gene length (bp) | 1125 |
| Transcript length (bp) | 1125 |
| Coding sequence length (bp) | 1125 |
| Protein length (aa) | 375 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF15159 | PIG-Y | Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y | 7.9E-21 | 291 | 368 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C6Y4B7|YIDS_SCHPO | Uncharacterized protein C227.19c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC227.19c PE=2 SV=1 | 291 | 369 | 2.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 295 | 317 | 22 |
| 2 | 337 | 359 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3805 MTSASALETSSAASSAERITLVFSVVHVTPNRSPRHMEEGNKSDNQNDESTTGSTSHRRAPSGSSLLSRLPFMRV SAECRPCQEPDYEELSSPPPSAVPVTIQHHKTRRRRGSLRKVALLGRGGQRDKRDERLLTSHILQITESAPDNSA YSGACVAGHDALGLKIVRQPQQSQDHSLPFQNTSMNPPQALSTMARGGSGSCTERDGERFHLYTSTTDEEDLLHM SPAALPPRTSLSMSSGSESYFGTRGSTDLPRSFKQAKSPLSYSGIPTNPIPPADSDWDYSETEWWGWVVLTVTWF VFVMGMGSCLDVWSWAWDVGKTPYAPPELEDDPTLPIVGYYPALIIMTGVMAWVWVVVAWVGMKYFRHAKISGD* |
| Coding | >Hirsu2|3805 ATGACCTCGGCCAGTGCCCTCGAAACCTCGTCTGCGGCCTCCTCTGCGGAGCGGATCACTCTGGTCTTTTCTGTT GTTCACGTGACGCCCAACCGATCTCCACGACACATGGAGGAAGGAAATAAGAGTGACAACCAGAATGACGAGTCT ACGACGGGTTCTACGTCTCATCGACGAGCGCCCTCGGGCTCCAGTCTGCTTTCAAGGCTTCCCTTCATGAGAGTT TCAGCTGAATGCAGGCCGTGTCAGGAACCCGACTACGAAGAATTATCTTCTCCCCCGCCCTCTGCCGTTCCCGTT ACGATTCAACATCACAAAACGCGACGACGGAGAGGATCCCTCAGGAAGGTGGCCCTCCTTGGCCGGGGGGGCCAG CGCGACAAAAGAGACGAAAGGCTCTTGACGTCGCACATCCTGCAGATAACGGAAAGCGCGCCAGATAATTCAGCA TACAGCGGAGCATGCGTCGCCGGGCATGACGCCCTTGGCCTTAAGATCGTCAGGCAACCTCAGCAGTCGCAAGAT CATTCCTTGCCATTCCAGAACACATCGATGAACCCACCTCAAGCGCTGTCAACGATGGCGAGGGGCGGCTCAGGG TCCTGCACAGAAAGGGATGGAGAACGATTTCATTTGTACACGTCCACTACGGATGAGGAGGACCTGCTTCACATG TCACCGGCCGCTTTGCCGCCACGAACGTCGCTGTCCATGTCCTCGGGATCTGAGTCCTACTTTGGGACACGCGGA AGCACAGATCTCCCAAGATCGTTTAAGCAAGCAAAGTCGCCCTTGTCGTATAGCGGCATCCCAACGAATCCCATT CCGCCAGCCGACTCGGACTGGGATTACTCAGAGACAGAGTGGTGGGGTTGGGTTGTGCTTACAGTTACATGGTTT GTCTTCGTCATGGGGATGGGCTCCTGTCTCGACGTCTGGAGCTGGGCGTGGGACGTTGGCAAAACACCGTACGCG CCGCCGGAGCTTGAAGACGACCCCACTCTGCCTATCGTCGGATATTATCCTGCGCTCATCATAATGACGGGAGTC ATGGCTTGGGTCTGGGTAGTTGTGGCTTGGGTTGGTATGAAATACTTTCGGCACGCCAAAATCAGCGGTGATTGA |
| Transcript | >Hirsu2|3805 ATGACCTCGGCCAGTGCCCTCGAAACCTCGTCTGCGGCCTCCTCTGCGGAGCGGATCACTCTGGTCTTTTCTGTT GTTCACGTGACGCCCAACCGATCTCCACGACACATGGAGGAAGGAAATAAGAGTGACAACCAGAATGACGAGTCT ACGACGGGTTCTACGTCTCATCGACGAGCGCCCTCGGGCTCCAGTCTGCTTTCAAGGCTTCCCTTCATGAGAGTT TCAGCTGAATGCAGGCCGTGTCAGGAACCCGACTACGAAGAATTATCTTCTCCCCCGCCCTCTGCCGTTCCCGTT ACGATTCAACATCACAAAACGCGACGACGGAGAGGATCCCTCAGGAAGGTGGCCCTCCTTGGCCGGGGGGGCCAG CGCGACAAAAGAGACGAAAGGCTCTTGACGTCGCACATCCTGCAGATAACGGAAAGCGCGCCAGATAATTCAGCA TACAGCGGAGCATGCGTCGCCGGGCATGACGCCCTTGGCCTTAAGATCGTCAGGCAACCTCAGCAGTCGCAAGAT CATTCCTTGCCATTCCAGAACACATCGATGAACCCACCTCAAGCGCTGTCAACGATGGCGAGGGGCGGCTCAGGG TCCTGCACAGAAAGGGATGGAGAACGATTTCATTTGTACACGTCCACTACGGATGAGGAGGACCTGCTTCACATG TCACCGGCCGCTTTGCCGCCACGAACGTCGCTGTCCATGTCCTCGGGATCTGAGTCCTACTTTGGGACACGCGGA AGCACAGATCTCCCAAGATCGTTTAAGCAAGCAAAGTCGCCCTTGTCGTATAGCGGCATCCCAACGAATCCCATT CCGCCAGCCGACTCGGACTGGGATTACTCAGAGACAGAGTGGTGGGGTTGGGTTGTGCTTACAGTTACATGGTTT GTCTTCGTCATGGGGATGGGCTCCTGTCTCGACGTCTGGAGCTGGGCGTGGGACGTTGGCAAAACACCGTACGCG CCGCCGGAGCTTGAAGACGACCCCACTCTGCCTATCGTCGGATATTATCCTGCGCTCATCATAATGACGGGAGTC ATGGCTTGGGTCTGGGTAGTTGTGGCTTGGGTTGGTATGAAATACTTTCGGCACGCCAAAATCAGCGGTGATTGA |
| Gene | >Hirsu2|3805 ATGACCTCGGCCAGTGCCCTCGAAACCTCGTCTGCGGCCTCCTCTGCGGAGCGGATCACTCTGGTCTTTTCTGTT GTTCACGTGACGCCCAACCGATCTCCACGACACATGGAGGAAGGAAATAAGAGTGACAACCAGAATGACGAGTCT ACGACGGGTTCTACGTCTCATCGACGAGCGCCCTCGGGCTCCAGTCTGCTTTCAAGGCTTCCCTTCATGAGAGTT TCAGCTGAATGCAGGCCGTGTCAGGAACCCGACTACGAAGAATTATCTTCTCCCCCGCCCTCTGCCGTTCCCGTT ACGATTCAACATCACAAAACGCGACGACGGAGAGGATCCCTCAGGAAGGTGGCCCTCCTTGGCCGGGGGGGCCAG CGCGACAAAAGAGACGAAAGGCTCTTGACGTCGCACATCCTGCAGATAACGGAAAGCGCGCCAGATAATTCAGCA TACAGCGGAGCATGCGTCGCCGGGCATGACGCCCTTGGCCTTAAGATCGTCAGGCAACCTCAGCAGTCGCAAGAT CATTCCTTGCCATTCCAGAACACATCGATGAACCCACCTCAAGCGCTGTCAACGATGGCGAGGGGCGGCTCAGGG TCCTGCACAGAAAGGGATGGAGAACGATTTCATTTGTACACGTCCACTACGGATGAGGAGGACCTGCTTCACATG TCACCGGCCGCTTTGCCGCCACGAACGTCGCTGTCCATGTCCTCGGGATCTGAGTCCTACTTTGGGACACGCGGA AGCACAGATCTCCCAAGATCGTTTAAGCAAGCAAAGTCGCCCTTGTCGTATAGCGGCATCCCAACGAATCCCATT CCGCCAGCCGACTCGGACTGGGATTACTCAGAGACAGAGTGGTGGGGTTGGGTTGTGCTTACAGTTACATGGTTT GTCTTCGTCATGGGGATGGGCTCCTGTCTCGACGTCTGGAGCTGGGCGTGGGACGTTGGCAAAACACCGTACGCG CCGCCGGAGCTTGAAGACGACCCCACTCTGCCTATCGTCGGATATTATCCTGCGCTCATCATAATGACGGGAGTC ATGGCTTGGGTCTGGGTAGTTGTGGCTTGGGTTGGTATGAAATACTTTCGGCACGCCAAAATCAGCGGTGATTGA |