© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3795 |
| Gene name | |
| Location | Contig_201:5873..7146 |
| Strand | + |
| Gene length (bp) | 1273 |
| Transcript length (bp) | 1182 |
| Coding sequence length (bp) | 1182 |
| Protein length (aa) | 394 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1405 | 0.0737 | 0.9753 | 0.0515 | 0.0686 | 0.0078 | 0.0845 | 0.0439 | 0.0888 | 0.0016 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.999712 |
| Orthofinder run ID | 4 |
| Orthogroup | 9434 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3795 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3795 MKYSVLLAVLAAARPAVYALPAGSHTESADVRADKGSSTVAAVEGSTTSEGGSTQTIQGAAPRRPCRSKGPPTGA GSSMEKGSGASSSAEAAPVGEKPEKDKPSGAEVATAGQDKKPEENKVDNAGPGSEMKAVQGGAGADKESTKTGAR PPCPSNGPEKGAGSKEKGGASNSADTAPVDKKPEENEADNSKLGADQRAVQGGAGAEKGSAETGRSPAARRPCPT KSATGTKGGEPGANASGGDKAAQETKAEDKDINSPEASTGPQAESTDQGVPDTKEPKDSRRGNFRQLSAEDSHQN NTQGNPSTQPTEEQQYDFKNFIPETKETKDGRRDNFRQLSAEDSHQDNIQGNPSTQPTEEQQYEFDIVPGVRPDS DSICDEYWIPLSFHRKVF* |
| Coding | >Hirsu2|3795 ATGAAATACTCAGTCCTGCTCGCTGTCCTCGCGGCGGCCCGGCCGGCCGTCTACGCCTTGCCGGCCGGGAGTCAC ACCGAGTCCGCCGACGTTAGGGCCGACAAAGGCAGCAGCACCGTAGCCGCCGTTGAAGGGAGCACGACGTCCGAG GGCGGGAGCACTCAGACCATCCAAGGCGCCGCACCCCGCCGGCCCTGTCGCAGCAAGGGGCCGCCGACTGGCGCT GGAAGCAGCATGGAGAAGGGTAGCGGCGCAAGCAGCAGCGCCGAGGCAGCGCCCGTGGGTGAGAAGCCCGAAAAA GACAAGCCTAGCGGCGCCGAGGTGGCGACCGCCGGCCAGGATAAGAAGCCCGAGGAAAACAAGGTCGACAACGCT GGGCCGGGGTCCGAGATGAAAGCCGTTCAAGGCGGCGCCGGAGCCGATAAAGAGAGTACTAAGACCGGAGCCCGC CCGCCCTGTCCCAGCAATGGACCGGAGAAGGGCGCTGGAAGCAAGGAGAAGGGTGGCGCGAGCAACAGCGCCGAC ACAGCGCCCGTGGATAAGAAGCCCGAGGAAAATGAGGCCGATAACTCCAAGCTAGGGGCCGACCAGAGAGCCGTT CAAGGCGGCGCCGGAGCCGAGAAAGGCAGCGCCGAGACCGGCCGGAGCCCCGCAGCCCGCCGCCCCTGTCCCACC AAGTCAGCGACCGGCACCAAAGGTGGCGAGCCCGGAGCCAACGCCTCCGGCGGCGACAAGGCCGCGCAGGAGACC AAAGCCGAAGACAAAGACATAAACAGCCCCGAGGCGTCAACGGGACCTCAAGCCGAGTCGACGGACCAAGGCGTT CCCGACACGAAGGAGCCCAAAGACAGCCGTCGTGGCAATTTCCGTCAGCTCAGCGCCGAGGACAGCCATCAGAAC AACACTCAGGGAAACCCTTCAACACAGCCGACAGAGGAGCAACAGTATGACTTCAAAAACTTCATCCCCGAGACG AAGGAGACCAAAGACGGCCGTCGTGACAATTTCCGTCAGCTTAGCGCCGAGGACAGCCATCAGGATAACATTCAG GGAAACCCTTCGACACAGCCTACAGAGGAGCAACAGTATGAATTCGACATCGTGCCCGGCGTCAGACCTGACTCG GACTCAATCTGCGACGAGTATTGGATCCCTCTTTCATTTCACAGAAAGGTCTTCTAA |
| Transcript | >Hirsu2|3795 ATGAAATACTCAGTCCTGCTCGCTGTCCTCGCGGCGGCCCGGCCGGCCGTCTACGCCTTGCCGGCCGGGAGTCAC ACCGAGTCCGCCGACGTTAGGGCCGACAAAGGCAGCAGCACCGTAGCCGCCGTTGAAGGGAGCACGACGTCCGAG GGCGGGAGCACTCAGACCATCCAAGGCGCCGCACCCCGCCGGCCCTGTCGCAGCAAGGGGCCGCCGACTGGCGCT GGAAGCAGCATGGAGAAGGGTAGCGGCGCAAGCAGCAGCGCCGAGGCAGCGCCCGTGGGTGAGAAGCCCGAAAAA GACAAGCCTAGCGGCGCCGAGGTGGCGACCGCCGGCCAGGATAAGAAGCCCGAGGAAAACAAGGTCGACAACGCT GGGCCGGGGTCCGAGATGAAAGCCGTTCAAGGCGGCGCCGGAGCCGATAAAGAGAGTACTAAGACCGGAGCCCGC CCGCCCTGTCCCAGCAATGGACCGGAGAAGGGCGCTGGAAGCAAGGAGAAGGGTGGCGCGAGCAACAGCGCCGAC ACAGCGCCCGTGGATAAGAAGCCCGAGGAAAATGAGGCCGATAACTCCAAGCTAGGGGCCGACCAGAGAGCCGTT CAAGGCGGCGCCGGAGCCGAGAAAGGCAGCGCCGAGACCGGCCGGAGCCCCGCAGCCCGCCGCCCCTGTCCCACC AAGTCAGCGACCGGCACCAAAGGTGGCGAGCCCGGAGCCAACGCCTCCGGCGGCGACAAGGCCGCGCAGGAGACC AAAGCCGAAGACAAAGACATAAACAGCCCCGAGGCGTCAACGGGACCTCAAGCCGAGTCGACGGACCAAGGCGTT CCCGACACGAAGGAGCCCAAAGACAGCCGTCGTGGCAATTTCCGTCAGCTCAGCGCCGAGGACAGCCATCAGAAC AACACTCAGGGAAACCCTTCAACACAGCCGACAGAGGAGCAACAGTATGACTTCAAAAACTTCATCCCCGAGACG AAGGAGACCAAAGACGGCCGTCGTGACAATTTCCGTCAGCTTAGCGCCGAGGACAGCCATCAGGATAACATTCAG GGAAACCCTTCGACACAGCCTACAGAGGAGCAACAGTATGAATTCGACATCGTGCCCGGCGTCAGACCTGACTCG GACTCAATCTGCGACGAGTATTGGATCCCTCTTTCATTTCACAGAAAGGTCTTCTAA |
| Gene | >Hirsu2|3795 ATGAAATACTCAGTCCTGCTCGCTGTCCTCGCGGCGGCCCGGCCGGCCGTCTACGCCTTGCCGGCCGGGAGTCAC ACCGAGTCCGCCGACGTTAGGGCCGACAAAGGCAGCAGCACCGTAGCCGCCGTTGAAGGGAGCACGACGTCCGAG GGCGGGAGCACTCAGACCATCCAAGGCGCCGCACCCCGCCGGCCCTGTCGCAGCAAGGGGCCGCCGACTGGCGCT GGAAGCAGCATGGAGAAGGGTAGCGGCGCAAGCAGCAGCGCCGAGGCAGCGCCCGTGGGTGAGAAGCCCGAAAAA GACAAGCCTAGCGGCGCCGAGGTGGCGACCGCCGGCCAGGATAAGAAGCCCGAGGAAAACAAGGTCGACAACGCT GGGCCGGGGTCCGAGATGAAAGCCGTTCAAGGCGGCGCCGGAGCCGATAAAGAGAGTACTAAGACCGGAGCCCGC CCGCCCTGTCCCAGCAATGGACCGGAGAAGGGCGCTGGAAGCAAGGAGAAGGGTGGCGCGAGCAACAGCGCCGAC ACAGCGCCCGTGGATAAGAAGCCCGAGGAAAATGAGGCCGATAACTCCAAGCTAGGGGCCGACCAGAGAGCCGTT CAAGGCGGCGCCGGAGCCGAGAAAGGCAGCGCCGAGACCGGCCGGAGCCCCGCAGCCCGCCGCCCCTGTCCCACC AAGTCAGCGACCGGCACCAAAGGTGGCGAGCCCGGAGCCAACGCCTCCGGCGGCGACAAGGCCGCGCAGGAGACC AAAGCCGAAGACAAAGACATAAACAGCCCCGAGGCGTCAACGGGACCTCAAGCCGAGTCGACGGACCAAGGCGTT CCCGACACGAAGGAGCCCAAAGACAGCCGTCGTGGCAATTTCCGTCAGCTCAGCGCCGAGGACAGCCATCAGAAC AACACTCAGGGAAACCCTTCAACACAGCCGACAGAGGAGCAACAGTATGACTTCAAAAACTTCATCCCCGAGACG AAGGAGACCAAAGACGGCCGTCGTGACAATTTCCGTCAGCTTAGCGCCGAGGACAGCCATCAGGATAACATTCAG GGAAACCCTTCGACACAGCCTACAGAGGAGCAACAGTATGAATTCGACATCGTGCCCGGCGTCAGACCTGACTCG GACTCAATCTGCGACGAGTATTGGATCCCTCTTTCATTTCACAGTGACTCAAAGGCTTGCCGTCAGGCGGAAAAG GAATGCATTCAAAGAGTTCAAAATATGACGGGTGCCAATATTCCTGACTATGATGAAAGGAAAGGTCTTCTAA |