© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3789 |
| Gene name | |
| Location | Contig_2009:18..954 |
| Strand | + |
| Gene length (bp) | 936 |
| Transcript length (bp) | 936 |
| Coding sequence length (bp) | 936 |
| Protein length (aa) | 312 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00856 | SET | SET domain | 2.2E-09 | 44 | 148 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74405|SET11_SCHPO | Ribosomal lysine N-methyltransferase set11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set11 PE=1 SV=1 | 42 | 177 | 3.0E-11 |
| sp|Q03942|RKM2_YEAST | Ribosomal lysine N-methyltransferase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RKM2 PE=1 SV=1 | 16 | 271 | 6.0E-11 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.5743 | 0.8275 | 0.2212 | 0.0427 | 0.06 | 0.0229 | 0.0764 | 0.04 | 0.0364 | 0.0176 |
| Orthofinder run ID | 4 |
| Orthogroup | 6617 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis map64 (Brazil) | OphauB2|1484 |
| Ophiocordyceps subramaniannii | Hirsu2|3789 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3789 LLAAEIALGRVEAPGWAALVPSWPDLEAAVPFAWPEALREALPCEARRLVAAQEARFRRDWQLFEPAFPGTGRQQ YAHAWFLVGTRTFYYETAETMLFPWSDRLALLPVADLFNHAPAGCLVSYSPDGYTVTADRPYPAGAELFISYGSH SNDFLLAEYGFLLRDNACDRVCLDDLILPKLPDDLKAELDERDVLGNFVLDPRSGICSRTRLAVRLLSCPPSQSR HEWQHLIDEAEHEDDEHVEASASRLLLTLLGEYLDTIDAIQTRLQKRRLGNDSQRALLAQRWRQIEAMVRQAAET GGRGGLKERHS* |
| Coding | >Hirsu2|3789 CTGCTGGCGGCCGAGATCGCCCTCGGCCGCGTCGAGGCCCCGGGCTGGGCCGCCCTCGTGCCGTCCTGGCCCGAC CTCGAGGCCGCCGTCCCGTTCGCCTGGCCCGAGGCCCTGCGCGAGGCCCTGCCGTGCGAGGCCCGGCGCCTGGTG GCCGCCCAGGAGGCCCGCTTCCGCCGCGACTGGCAGCTCTTCGAGCCCGCCTTTCCCGGCACCGGCCGCCAGCAG TACGCCCACGCCTGGTTCCTCGTCGGCACCCGGACCTTCTACTACGAGACGGCCGAGACGATGCTCTTCCCCTGG TCCGACCGCCTGGCCCTGCTGCCCGTCGCCGATCTCTTCAACCACGCCCCGGCCGGCTGCCTCGTCTCCTACTCG CCCGACGGCTATACCGTTACCGCCGACCGGCCCTATCCCGCCGGCGCCGAGCTCTTCATCTCCTACGGCAGCCAC TCCAACGACTTCCTGCTGGCCGAGTATGGCTTCCTGCTGCGGGACAATGCCTGCGATCGCGTCTGTCTCGACGAC CTGATCCTGCCCAAGCTGCCCGACGACCTCAAGGCCGAGCTGGACGAGAGGGACGTCCTCGGCAACTTCGTCCTC GACCCACGCTCGGGCATCTGCAGCAGGACCCGCCTCGCCGTCCGCCTACTCTCTTGCCCGCCGTCGCAGTCGAGA CACGAATGGCAGCACCTCATCGACGAGGCAGAACACGAAGACGACGAGCACGTCGAGGCGTCCGCCAGCCGACTG CTGCTGACTCTCCTTGGCGAGTACTTGGACACCATCGACGCGATCCAGACCCGCCTGCAGAAGCGACGGCTCGGC AACGACTCTCAGCGCGCACTTCTCGCCCAGAGATGGAGGCAGATCGAGGCCATGGTCAGGCAGGCTGCCGAGACG GGCGGCCGTGGTGGACTGAAGGAGCGCCACTCGTGA |
| Transcript | >Hirsu2|3789 CTGCTGGCGGCCGAGATCGCCCTCGGCCGCGTCGAGGCCCCGGGCTGGGCCGCCCTCGTGCCGTCCTGGCCCGAC CTCGAGGCCGCCGTCCCGTTCGCCTGGCCCGAGGCCCTGCGCGAGGCCCTGCCGTGCGAGGCCCGGCGCCTGGTG GCCGCCCAGGAGGCCCGCTTCCGCCGCGACTGGCAGCTCTTCGAGCCCGCCTTTCCCGGCACCGGCCGCCAGCAG TACGCCCACGCCTGGTTCCTCGTCGGCACCCGGACCTTCTACTACGAGACGGCCGAGACGATGCTCTTCCCCTGG TCCGACCGCCTGGCCCTGCTGCCCGTCGCCGATCTCTTCAACCACGCCCCGGCCGGCTGCCTCGTCTCCTACTCG CCCGACGGCTATACCGTTACCGCCGACCGGCCCTATCCCGCCGGCGCCGAGCTCTTCATCTCCTACGGCAGCCAC TCCAACGACTTCCTGCTGGCCGAGTATGGCTTCCTGCTGCGGGACAATGCCTGCGATCGCGTCTGTCTCGACGAC CTGATCCTGCCCAAGCTGCCCGACGACCTCAAGGCCGAGCTGGACGAGAGGGACGTCCTCGGCAACTTCGTCCTC GACCCACGCTCGGGCATCTGCAGCAGGACCCGCCTCGCCGTCCGCCTACTCTCTTGCCCGCCGTCGCAGTCGAGA CACGAATGGCAGCACCTCATCGACGAGGCAGAACACGAAGACGACGAGCACGTCGAGGCGTCCGCCAGCCGACTG CTGCTGACTCTCCTTGGCGAGTACTTGGACACCATCGACGCGATCCAGACCCGCCTGCAGAAGCGACGGCTCGGC AACGACTCTCAGCGCGCACTTCTCGCCCAGAGATGGAGGCAGATCGAGGCCATGGTCAGGCAGGCTGCCGAGACG GGCGGCCGTGGTGGACTGAAGGAGCGCCACTCGTGA |
| Gene | >Hirsu2|3789 CTGCTGGCGGCCGAGATCGCCCTCGGCCGCGTCGAGGCCCCGGGCTGGGCCGCCCTCGTGCCGTCCTGGCCCGAC CTCGAGGCCGCCGTCCCGTTCGCCTGGCCCGAGGCCCTGCGCGAGGCCCTGCCGTGCGAGGCCCGGCGCCTGGTG GCCGCCCAGGAGGCCCGCTTCCGCCGCGACTGGCAGCTCTTCGAGCCCGCCTTTCCCGGCACCGGCCGCCAGCAG TACGCCCACGCCTGGTTCCTCGTCGGCACCCGGACCTTCTACTACGAGACGGCCGAGACGATGCTCTTCCCCTGG TCCGACCGCCTGGCCCTGCTGCCCGTCGCCGATCTCTTCAACCACGCCCCGGCCGGCTGCCTCGTCTCCTACTCG CCCGACGGCTATACCGTTACCGCCGACCGGCCCTATCCCGCCGGCGCCGAGCTCTTCATCTCCTACGGCAGCCAC TCCAACGACTTCCTGCTGGCCGAGTATGGCTTCCTGCTGCGGGACAATGCCTGCGATCGCGTCTGTCTCGACGAC CTGATCCTGCCCAAGCTGCCCGACGACCTCAAGGCCGAGCTGGACGAGAGGGACGTCCTCGGCAACTTCGTCCTC GACCCACGCTCGGGCATCTGCAGCAGGACCCGCCTCGCCGTCCGCCTACTCTCTTGCCCGCCGTCGCAGTCGAGA CACGAATGGCAGCACCTCATCGACGAGGCAGAACACGAAGACGACGAGCACGTCGAGGCGTCCGCCAGCCGACTG CTGCTGACTCTCCTTGGCGAGTACTTGGACACCATCGACGCGATCCAGACCCGCCTGCAGAAGCGACGGCTCGGC AACGACTCTCAGCGCGCACTTCTCGCCCAGAGATGGAGGCAGATCGAGGCCATGGTCAGGCAGGCTGCCGAGACG GGCGGCCGTGGTGGACTGAAGGAGCGCCACTCGTGA |