Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3788
Gene name
LocationContig_2008:3326..3695
Strand+
Gene length (bp)369
Transcript length (bp)369
Coding sequence length (bp)369
Protein length (aa) 123

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11327 Egh16-like Egh16-like virulence factor 1.2E-10 26 108

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6041 0.3165 0.4491 0.1784 0.1743 0.0187 0.1139 0.1775 0.2009 0.0207

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup421
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7655
Ophiocordyceps australis map64 (Brazil) OphauB2|7384
Ophiocordyceps camponoti-floridani Ophcf2|04627
Ophiocordyceps camponoti-rufipedis Ophun1|2965
Ophiocordyceps kimflemingae Ophio5|4188
Ophiocordyceps kimflemingae Ophio5|7836
Ophiocordyceps subramaniannii Hirsu2|3788 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5369
Ophiocordyceps subramaniannii Hirsu2|9181

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3788
MDQFREFADELQITVRDSDIGLLSITQSQFDSPKMNIDEIERKVVNKCGRSEMGMIDMGAGMLTAAQTGLLTQLK
AGSNCTATIRQINQDGGPEYRCELDQDGQGKFDVVSAASTQRARAQN*
Coding >Hirsu2|3788
ATGGACCAGTTCCGAGAATTCGCGGACGAGCTCCAGATCACGGTGCGCGATTCAGACATCGGGCTGTTGTCCATA
ACCCAGAGCCAGTTCGACAGTCCCAAGATGAACATTGACGAGATCGAGCGCAAGGTCGTCAATAAATGCGGACGC
TCCGAAATGGGCATGATCGACATGGGCGCCGGCATGCTCACCGCCGCACAGACCGGCCTTCTCACCCAGCTCAAG
GCCGGCAGCAATTGCACCGCGACGATCCGCCAGATCAACCAAGACGGTGGCCCGGAGTACAGGTGCGAGTTGGAC
CAAGACGGCCAGGGCAAATTCGACGTGGTGAGTGCAGCGTCTACACAGAGGGCACGAGCGCAGAACTAA
Transcript >Hirsu2|3788
ATGGACCAGTTCCGAGAATTCGCGGACGAGCTCCAGATCACGGTGCGCGATTCAGACATCGGGCTGTTGTCCATA
ACCCAGAGCCAGTTCGACAGTCCCAAGATGAACATTGACGAGATCGAGCGCAAGGTCGTCAATAAATGCGGACGC
TCCGAAATGGGCATGATCGACATGGGCGCCGGCATGCTCACCGCCGCACAGACCGGCCTTCTCACCCAGCTCAAG
GCCGGCAGCAATTGCACCGCGACGATCCGCCAGATCAACCAAGACGGTGGCCCGGAGTACAGGTGCGAGTTGGAC
CAAGACGGCCAGGGCAAATTCGACGTGGTGAGTGCAGCGTCTACACAGAGGGCACGAGCGCAGAACTAA
Gene >Hirsu2|3788
ATGGACCAGTTCCGAGAATTCGCGGACGAGCTCCAGATCACGGTGCGCGATTCAGACATCGGGCTGTTGTCCATA
ACCCAGAGCCAGTTCGACAGTCCCAAGATGAACATTGACGAGATCGAGCGCAAGGTCGTCAATAAATGCGGACGC
TCCGAAATGGGCATGATCGACATGGGCGCCGGCATGCTCACCGCCGCACAGACCGGCCTTCTCACCCAGCTCAAG
GCCGGCAGCAATTGCACCGCGACGATCCGCCAGATCAACCAAGACGGTGGCCCGGAGTACAGGTGCGAGTTGGAC
CAAGACGGCCAGGGCAAATTCGACGTGGTGAGTGCAGCGTCTACACAGAGGGCACGAGCGCAGAACTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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