Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3781
Gene name
LocationContig_2004:3541..3932
Strand+
Gene length (bp)391
Transcript length (bp)270
Coding sequence length (bp)270
Protein length (aa) 90

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Transmembrane domain 0.0952 0.0841 0.1536 0.1109 0.6063 0.0603 0.7532 0.1581 0.4903 0.1885

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 20 42 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup335
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7477
Ophiocordyceps australis map64 (Brazil) OphauB2|3631
Ophiocordyceps australis map64 (Brazil) OphauB2|3633
Ophiocordyceps camponoti-floridani Ophcf2|05060
Ophiocordyceps camponoti-floridani Ophcf2|05061
Ophiocordyceps camponoti-rufipedis Ophun1|3950
Ophiocordyceps kimflemingae Ophio5|4580
Ophiocordyceps kimflemingae Ophio5|4581
Ophiocordyceps subramaniannii Hirsu2|3781 (this protein)
Ophiocordyceps subramaniannii Hirsu2|6104

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3781
MADLSLDSYWQLPPLSRSVATAAFAISASVHLGFLPGWWFVFYPRFLWKIPPQIWRFGTAFLLTGPKLGLLFDTR
TSSGISPLSAAPSW*
Coding >Hirsu2|3781
ATGGCCGACCTGTCGCTCGACAGCTACTGGCAGCTGCCGCCGTTGTCGAGGTCCGTCGCGACGGCGGCCTTCGCC
ATCTCTGCCAGCGTCCACCTCGGCTTCCTCCCCGGCTGGTGGTTCGTCTTTTACCCGCGCTTCCTCTGGAAGATT
CCGCCGCAGATATGGCGCTTCGGGACCGCATTCCTCCTCACGGGACCCAAGCTGGGCCTGCTCTTTGACACGAGG
ACCTCCTCTGGTATCTCACCTTTATCGGCGGCACCATCATGGTAA
Transcript >Hirsu2|3781
ATGGCCGACCTGTCGCTCGACAGCTACTGGCAGCTGCCGCCGTTGTCGAGGTCCGTCGCGACGGCGGCCTTCGCC
ATCTCTGCCAGCGTCCACCTCGGCTTCCTCCCCGGCTGGTGGTTCGTCTTTTACCCGCGCTTCCTCTGGAAGATT
CCGCCGCAGATATGGCGCTTCGGGACCGCATTCCTCCTCACGGGACCCAAGCTGGGCCTGCTCTTTGACACGAGG
ACCTCCTCTGGTATCTCACCTTTATCGGCGGCACCATCATGGTAA
Gene >Hirsu2|3781
ATGGCCGACCTGTCGCTCGACAGCTACTGGCAGCTGCCGCCGTTGTCGAGGTGCGCACATGATTCCCTCGCGGTC
ATCTCCTCGTCGTGCTAACGCATCGTCCGTCACAGGTCCGTCGCGACGGCGGCCTTCGCCATCTCTGCCAGCGTC
CACCTCGGCTTCCTCCCCGGCTGGTGGTTCGTCTTTTACCCGCGCTTCCTCTGGAAGATTCCGCCGCAGATATGG
CGCTTCGGGACCGCATTCCTCCTCACGGGACCCAAGCTGGGCCTGCTCTTTGACACGTACTTTCTCTATTCGTAT
CTCAGCCAGCTGGAGGTCGGCAACCCTCGCTTCTCTCGCAAGGAGGACCTCCTCTGGTATCTCACCTTTATCGGC
GGCACCATCATGGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail