Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3780
Gene name
LocationContig_2004:2530..3059
Strand-
Gene length (bp)529
Transcript length (bp)333
Coding sequence length (bp)333
Protein length (aa) 111

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion Transmembrane domain|Mitochondrial transit peptide 0.0557 0.1622 0.0122 0.0367 0.8973 0.2203 0.3329 0.1044 0.0917 0.0219

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 31 53 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup541
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|3634
Ophiocordyceps camponoti-floridani Ophcf2|05059
Ophiocordyceps camponoti-rufipedis Ophun1|3951
Ophiocordyceps camponoti-rufipedis Ophun1|6365
Ophiocordyceps kimflemingae Ophio5|4582
Ophiocordyceps subramaniannii Hirsu2|3780 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5737
Ophiocordyceps subramaniannii Hirsu2|9977

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3780
MPSSHSALNSDEANDAAWEAGKGALVGAAKWGAGTAVLGAIGFVCSPVYRATTIQFKVYIQMSGMLLGGMIEADR
SLRQYEYQMKMQRRWHQEKAKWERYEEEFSGRNDK*
Coding >Hirsu2|3780
ATGCCGTCGTCGCACAGCGCCCTGAACAGCGACGAGGCCAACGACGCCGCCTGGGAGGCCGGCAAGGGCGCTCTG
GTCGGCGCCGCCAAATGGGGCGCCGGCACGGCCGTGCTGGGCGCCATCGGCTTCGTCTGCTCGCCGGTATATCGC
GCAACCACCATCCAGTTCAAAGTATACATCCAAATGTCCGGCATGCTGCTCGGCGGCATGATCGAGGCAGACCGG
AGCCTGAGGCAGTACGAGTATCAGATGAAGATGCAGAGGCGCTGGCACCAGGAAAAGGCCAAGTGGGAGCGATAC
GAGGAGGAGTTCTCGGGCAGGAACGACAAGTGA
Transcript >Hirsu2|3780
ATGCCGTCGTCGCACAGCGCCCTGAACAGCGACGAGGCCAACGACGCCGCCTGGGAGGCCGGCAAGGGCGCTCTG
GTCGGCGCCGCCAAATGGGGCGCCGGCACGGCCGTGCTGGGCGCCATCGGCTTCGTCTGCTCGCCGGTATATCGC
GCAACCACCATCCAGTTCAAAGTATACATCCAAATGTCCGGCATGCTGCTCGGCGGCATGATCGAGGCAGACCGG
AGCCTGAGGCAGTACGAGTATCAGATGAAGATGCAGAGGCGCTGGCACCAGGAAAAGGCCAAGTGGGAGCGATAC
GAGGAGGAGTTCTCGGGCAGGAACGACAAGTGA
Gene >Hirsu2|3780
ATGCCGTCGTCGCACAGCGCCCTGAACAGCGACGAGGCCAACGACGCCGCCTGGGAGGCCGGCAAGGGCGCTCTG
GTCGGCGCCGCCAAATGGGGCGCCGGCACGGCCGTGCTGGGCGCCATCGGCTTCGTCTGCTCGCCGGTATATCGC
GCAACCACCATCCAGTTCAAAGTGTGAGGCGGCACCATCAGTCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNN
NNNNCCCCTTCCCCCTCCTCCCCTGCCCTCTTTTCCTCTTCCCGTCTGGCGAGGACTTTTCCTCGCCCCGTTTGG
CGAGGACAGGGGGTGGCGCGTGGTCTGCTCCCTCCGCCGAGGGCTCAGATGGCTCATCCAACGCCGCAGATACAT
CCAAATGTCCGGCATGCTGCTCGGCGGCATGATCGAGGCAGACCGGAGCCTGAGGCAGTACGAGTATCAGATGAA
GATGCAGAGGCGCTGGCACCAGGAAAAGGCCAAGTGGGAGCGATACGAGGAGGAGTTCTCGGGCAGGAACGACAA
GTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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