© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|378 |
| Gene name | |
| Location | Contig_1072:1029..3639 |
| Strand | - |
| Gene length (bp) | 2610 |
| Transcript length (bp) | 2403 |
| Coding sequence length (bp) | 2403 |
| Protein length (aa) | 801 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 9.5E-169 | 104 | 754 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 12 | 800 | 0.0E+00 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 29 | 781 | 0.0E+00 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 83 | 780 | 9.0E-156 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 71 | 783 | 7.0E-155 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 83 | 791 | 2.0E-152 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 12 | 800 | 0.0E+00 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 29 | 781 | 0.0E+00 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 83 | 780 | 9.0E-156 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 71 | 783 | 7.0E-155 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 83 | 791 | 2.0E-152 |
| sp|O23482|OPT3_ARATH | Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 | 71 | 783 | 5.0E-150 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 20 | 780 | 4.0E-149 |
| sp|O82485|OPT7_ARATH | Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1 | 85 | 783 | 3.0E-146 |
| sp|Q9FME8|OPT4_ARATH | Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=1 SV=1 | 74 | 795 | 2.0E-145 |
| sp|Q9T095|OPT6_ARATH | Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 | 73 | 795 | 7.0E-143 |
| sp|Q9FJD1|OPT8_ARATH | Oligopeptide transporter 8 OS=Arabidopsis thaliana GN=OPT8 PE=2 SV=1 | 72 | 783 | 5.0E-138 |
| sp|Q9FJD2|OPT9_ARATH | Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 | 89 | 791 | 1.0E-130 |
| sp|Q06593|OPT2_YEAST | Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT2 PE=1 SV=1 | 37 | 772 | 3.0E-118 |
| sp|Q7LL00|YQJC_SCHPO | Uncharacterized oligopeptide transporter C1840.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.12 PE=3 SV=2 | 21 | 783 | 6.0E-97 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:0042887 | amide transmembrane transporter activity | No |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 106 | 128 | 22 |
| 2 | 133 | 155 | 22 |
| 3 | 210 | 232 | 22 |
| 4 | 236 | 258 | 22 |
| 5 | 279 | 301 | 22 |
| 6 | 321 | 343 | 22 |
| 7 | 352 | 374 | 22 |
| 8 | 428 | 450 | 22 |
| 9 | 480 | 497 | 17 |
| 10 | 507 | 529 | 22 |
| 11 | 536 | 558 | 22 |
| 12 | 589 | 611 | 22 |
| 13 | 656 | 678 | 22 |
| 14 | 701 | 723 | 22 |
| 15 | 736 | 758 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|378 MGFKDRFRVKASETPVDSAESTGAEILPSVSADHNPDRELRRFRKQHKWDPFLDIDKLDNIDDALASGNAEKEAA VDESLIQEDSPYPEVRASVPPHDIDMPVNTLRAWVIGGFLCTVVAACNILLNLRRTPISITSTVVQLIAYPMGVG WARFVPEKSFRIFGYTLELNPCPFNVKEHTIITMMTAAGSSISYSIDILLAQEIFYKQEFKWGFQILLMLSTQAM GFGIAGIARRFLVWPSSMVWPATLITCSVMYSLHDHRASDPSETNGWRIGRYKFFLLVALVTFTWEWFPLVIAPF LSLFLFATWIAPTNVVVNQIFGGQSGLGLLPISFDWSVVTAFLNSPLQTPAFAIFNVCAGIMLTTVGAIGLAWAG PEFYRYLPLSANQNFDRFAEPYNTSRILTPDFTVNETAYKAYSPILLGPTFSLSYGLSFATLISTVTHVALFYGA DVWNRAWDSKYEEPDVHLKLMRKYKEAPEWWFLSIFAVSFAFGMIASQVWKTHLPWWAYIICILIGVVLFIPIGM VQAITNQQTGLNVITEMIVGYMMPGRPVAMMLFKSWGYMLSYNGLNYISDMKVGHYMKIPPRSMFAAQAFAVVWL SFVQISTYNFLRGNIKGICTKEQAQGLTCPNARTFYNASVIWGVIGPAKVFGAGSIYAWTNWFWLIGFAVPVIQW AAARRYPRSWARYLVSPALFGAAGMIPPATLFYLFQWVIVGLIFNFFIRRRFFGWWTRYNYPLSGALDIGTALCT VISGLGLGLSETQFPRWWGTDVVGNTLDANSTAVTKTFMEGQAPIGPSSW* |
| Coding | >Hirsu2|378 ATGGGCTTCAAGGACCGCTTTCGCGTCAAGGCGAGCGAGACGCCCGTTGACAGCGCCGAGTCGACGGGCGCCGAG ATCCTGCCCTCCGTCTCCGCCGACCACAACCCGGACCGCGAGCTGCGCCGCTTCCGCAAGCAGCACAAGTGGGAT CCCTTCCTCGACATCGACAAGCTCGACAACATCGACGATGCCCTCGCCTCGGGCAACGCCGAGAAGGAGGCCGCC GTCGACGAGTCGCTCATCCAGGAGGACTCGCCCTACCCCGAAGTCCGCGCCTCGGTGCCGCCCCACGACATCGAC ATGCCCGTCAACACCCTCCGCGCCTGGGTCATCGGCGGTTTTCTCTGCACCGTCGTCGCCGCCTGCAACATCCTC CTCAACCTGCGGCGCACCCCCATCTCCATCACCTCCACCGTCGTCCAGCTGATCGCGTACCCGATGGGCGTCGGC TGGGCGAGATTCGTGCCGGAAAAGTCGTTTCGCATCTTCGGCTACACCCTCGAGCTGAATCCCTGCCCCTTCAAC GTCAAGGAGCACACCATCATCACCATGATGACGGCCGCCGGCTCCTCCATCAGCTACTCCATCGACATCCTGCTC GCCCAGGAAATCTTCTACAAGCAAGAGTTCAAGTGGGGCTTCCAGATCCTGCTCATGCTGTCTACCCAGGCCATG GGCTTCGGCATCGCCGGCATCGCCCGCCGCTTCCTCGTCTGGCCCTCGTCCATGGTCTGGCCCGCCACCCTCATC ACCTGCTCCGTCATGTACTCGCTGCACGACCACCGGGCCTCGGACCCGTCCGAGACCAACGGCTGGCGCATCGGC CGCTACAAGTTCTTCCTGCTTGTCGCCCTCGTCACCTTCACCTGGGAGTGGTTCCCCCTCGTCATCGCCCCCTTC CTCTCCCTCTTCCTCTTCGCCACCTGGATCGCGCCGACCAACGTCGTCGTCAACCAAATCTTCGGCGGCCAGTCC GGCCTCGGCCTGCTGCCCATCTCCTTCGACTGGTCCGTCGTCACCGCCTTCCTCAACTCGCCGCTGCAGACGCCG GCCTTTGCCATCTTCAACGTCTGCGCCGGCATCATGCTCACCACCGTCGGCGCCATCGGCCTCGCCTGGGCCGGC CCCGAGTTCTACCGCTACCTGCCCCTCAGCGCCAACCAGAACTTCGACCGCTTCGCCGAGCCCTACAACACGAGC CGCATCCTGACGCCCGACTTCACCGTCAACGAGACGGCCTACAAGGCCTACTCGCCCATCCTGCTCGGGCCCACC TTCTCGCTCTCGTACGGCCTCTCCTTCGCCACCCTCATCTCCACCGTCACCCACGTCGCCCTCTTCTACGGCGCC GACGTCTGGAACCGCGCCTGGGACTCCAAGTACGAGGAGCCCGACGTCCACCTCAAGCTCATGCGCAAGTACAAG GAGGCCCCCGAGTGGTGGTTCCTGTCCATCTTCGCCGTCAGCTTCGCCTTCGGCATGATTGCCTCCCAGGTCTGG AAGACGCACCTGCCCTGGTGGGCCTACATCATCTGCATCCTCATCGGCGTCGTCCTCTTCATCCCCATCGGCATG GTCCAGGCCATCACCAACCAGCAGACGGGCCTCAACGTCATCACCGAGATGATCGTCGGCTACATGATGCCCGGC CGCCCCGTCGCCATGATGCTCTTCAAGTCGTGGGGCTACATGCTGTCCTACAACGGCCTCAACTACATCTCGGAC ATGAAGGTCGGCCACTACATGAAGATTCCGCCCCGCAGCATGTTCGCCGCCCAGGCCTTCGCCGTCGTCTGGCTC TCCTTCGTCCAGATCTCCACCTACAACTTCCTGCGCGGCAACATCAAGGGTATCTGCACCAAGGAGCAGGCCCAG GGCCTGACGTGCCCCAACGCCCGCACCTTTTACAACGCCAGCGTCATCTGGGGCGTCATCGGCCCGGCCAAGGTC TTCGGCGCCGGCAGCATCTACGCCTGGACCAACTGGTTCTGGCTCATCGGCTTCGCCGTGCCCGTCATCCAGTGG GCGGCCGCCCGCCGCTACCCGCGCTCCTGGGCCCGCTACCTCGTCTCGCCCGCCCTGTTCGGCGCCGCCGGCATG ATCCCGCCCGCCACCCTCTTCTACCTCTTCCAGTGGGTCATCGTCGGCCTCATCTTCAACTTCTTCATCCGCAGG CGCTTCTTTGGCTGGTGGACGCGCTACAACTATCCGCTCTCGGGCGCCCTCGACATCGGGACCGCCCTGTGCACC GTCATCTCCGGGCTCGGCCTGGGCCTGAGCGAGACGCAGTTCCCCCGGTGGTGGGGCACCGACGTGGTCGGCAAC ACGCTCGACGCCAACAGCACCGCCGTCACCAAGACGTTTATGGAAGGCCAGGCGCCCATCGGACCCTCGAGCTGG TAG |
| Transcript | >Hirsu2|378 ATGGGCTTCAAGGACCGCTTTCGCGTCAAGGCGAGCGAGACGCCCGTTGACAGCGCCGAGTCGACGGGCGCCGAG ATCCTGCCCTCCGTCTCCGCCGACCACAACCCGGACCGCGAGCTGCGCCGCTTCCGCAAGCAGCACAAGTGGGAT CCCTTCCTCGACATCGACAAGCTCGACAACATCGACGATGCCCTCGCCTCGGGCAACGCCGAGAAGGAGGCCGCC GTCGACGAGTCGCTCATCCAGGAGGACTCGCCCTACCCCGAAGTCCGCGCCTCGGTGCCGCCCCACGACATCGAC ATGCCCGTCAACACCCTCCGCGCCTGGGTCATCGGCGGTTTTCTCTGCACCGTCGTCGCCGCCTGCAACATCCTC CTCAACCTGCGGCGCACCCCCATCTCCATCACCTCCACCGTCGTCCAGCTGATCGCGTACCCGATGGGCGTCGGC TGGGCGAGATTCGTGCCGGAAAAGTCGTTTCGCATCTTCGGCTACACCCTCGAGCTGAATCCCTGCCCCTTCAAC GTCAAGGAGCACACCATCATCACCATGATGACGGCCGCCGGCTCCTCCATCAGCTACTCCATCGACATCCTGCTC GCCCAGGAAATCTTCTACAAGCAAGAGTTCAAGTGGGGCTTCCAGATCCTGCTCATGCTGTCTACCCAGGCCATG GGCTTCGGCATCGCCGGCATCGCCCGCCGCTTCCTCGTCTGGCCCTCGTCCATGGTCTGGCCCGCCACCCTCATC ACCTGCTCCGTCATGTACTCGCTGCACGACCACCGGGCCTCGGACCCGTCCGAGACCAACGGCTGGCGCATCGGC CGCTACAAGTTCTTCCTGCTTGTCGCCCTCGTCACCTTCACCTGGGAGTGGTTCCCCCTCGTCATCGCCCCCTTC CTCTCCCTCTTCCTCTTCGCCACCTGGATCGCGCCGACCAACGTCGTCGTCAACCAAATCTTCGGCGGCCAGTCC GGCCTCGGCCTGCTGCCCATCTCCTTCGACTGGTCCGTCGTCACCGCCTTCCTCAACTCGCCGCTGCAGACGCCG GCCTTTGCCATCTTCAACGTCTGCGCCGGCATCATGCTCACCACCGTCGGCGCCATCGGCCTCGCCTGGGCCGGC CCCGAGTTCTACCGCTACCTGCCCCTCAGCGCCAACCAGAACTTCGACCGCTTCGCCGAGCCCTACAACACGAGC CGCATCCTGACGCCCGACTTCACCGTCAACGAGACGGCCTACAAGGCCTACTCGCCCATCCTGCTCGGGCCCACC TTCTCGCTCTCGTACGGCCTCTCCTTCGCCACCCTCATCTCCACCGTCACCCACGTCGCCCTCTTCTACGGCGCC GACGTCTGGAACCGCGCCTGGGACTCCAAGTACGAGGAGCCCGACGTCCACCTCAAGCTCATGCGCAAGTACAAG GAGGCCCCCGAGTGGTGGTTCCTGTCCATCTTCGCCGTCAGCTTCGCCTTCGGCATGATTGCCTCCCAGGTCTGG AAGACGCACCTGCCCTGGTGGGCCTACATCATCTGCATCCTCATCGGCGTCGTCCTCTTCATCCCCATCGGCATG GTCCAGGCCATCACCAACCAGCAGACGGGCCTCAACGTCATCACCGAGATGATCGTCGGCTACATGATGCCCGGC CGCCCCGTCGCCATGATGCTCTTCAAGTCGTGGGGCTACATGCTGTCCTACAACGGCCTCAACTACATCTCGGAC ATGAAGGTCGGCCACTACATGAAGATTCCGCCCCGCAGCATGTTCGCCGCCCAGGCCTTCGCCGTCGTCTGGCTC TCCTTCGTCCAGATCTCCACCTACAACTTCCTGCGCGGCAACATCAAGGGTATCTGCACCAAGGAGCAGGCCCAG GGCCTGACGTGCCCCAACGCCCGCACCTTTTACAACGCCAGCGTCATCTGGGGCGTCATCGGCCCGGCCAAGGTC TTCGGCGCCGGCAGCATCTACGCCTGGACCAACTGGTTCTGGCTCATCGGCTTCGCCGTGCCCGTCATCCAGTGG GCGGCCGCCCGCCGCTACCCGCGCTCCTGGGCCCGCTACCTCGTCTCGCCCGCCCTGTTCGGCGCCGCCGGCATG ATCCCGCCCGCCACCCTCTTCTACCTCTTCCAGTGGGTCATCGTCGGCCTCATCTTCAACTTCTTCATCCGCAGG CGCTTCTTTGGCTGGTGGACGCGCTACAACTATCCGCTCTCGGGCGCCCTCGACATCGGGACCGCCCTGTGCACC GTCATCTCCGGGCTCGGCCTGGGCCTGAGCGAGACGCAGTTCCCCCGGTGGTGGGGCACCGACGTGGTCGGCAAC ACGCTCGACGCCAACAGCACCGCCGTCACCAAGACGTTTATGGAAGGCCAGGCGCCCATCGGACCCTCGAGCTGG TAG |
| Gene | >Hirsu2|378 ATGGGCTTCAAGGACCGCTTTCGCGTCAAGGCGAGCGAGACGCCCGTTGACAGCGCCGAGTCGACGGGCGCCGAG ATCCTGCCCTCCGTCTCCGCCGACCACAACCCGGACCGCGAGCTGCGCCGCTTCCGCAAGCAGCACAAGTGGGAT CCCTTCCTCGACATCGACAAGCTCGACAACATCGACGATGCCCTCGCCTCGGGCAACGCCGAGAAGGAGGCCGCC GTCGACGAGTCGCTCATCCAGGAGGACTCGCCCTACCCCGAAGTCCGCGCCTCGGTGAGCGCGCCCCGCCGTCCG GGTCCGCCCACGCTTCCTGCTGACCTCGCCCGCTCCCCAGGTGCCGCCCCACGACATCGACATGCCCGTCAACAC CCTCCGCGCCTGGGTCATCGGCGGTTTTCTCTGCACCGTCGTCGCCGCCTGCAACATCCTCCTCAACCTGCGGCG CACCCCCATCTCCATCACCTCCACCGTCGTCCAGCTGATCGCGTACCCGTGAGTGCCTCCCTCGAGCCAATCCCC CCCCCTTTCCGCCGCGACGACCCAATTGACCTCGCTCTTTTCTCCCCGCGCACAGGATGGGCGTCGGCTGGGCGA GATTCGTGCCGGAAAAGTCGTTTCGCATCTTCGGCTACACCCTCGAGCTGAATCCCTGCCCCTTCAACGTCAAGG AGCACACCATCATCACCATGATGACGGCCGCCGGCTCCTCCATCAGCTACTCCATCGACATCCTGCTCGCCCAGG AAATCTTCTACAAGCAAGAGTTCAAGTGGGGCTTCCAGATCCTGCTCATGCTGTCTACCCAGGCCATGGGCTTCG GCATCGCCGGCATCGCCCGCCGCTTCCTCGTCTGGCCCTCGTCCATGGTCTGGCCCGCCACCCTCATCACCTGCT CCGTCATGTACTCGCTGCACGACCACCGGGCCTCGGACCCGTCCGAGACCAACGGCTGGCGCATCGGCCGCTACA AGTTCTTCCTGCTTGTCGCCCTCGTCACCTTCACCTGGGAGTGGTTCCCCCTCGTCATCGCCCCCTTCCTCTCCC TCTTCCTCTTCGCCACCTGGATCGCGCCGACCAACGTCGTCGTCAACCAAATCTTCGGCGGCCAGTCCGGCCTCG GCCTGCTGCCCATCTCCTTCGACTGGTCCGTCGTCACCGCCTTCCTCAACTCGCCGCTGCAGACGCCGGCCTTTG CCATCTTCAACGTCTGCGCCGGCATCATGCTCACCACCGTCGGCGCCATCGGCCTCGCCTGGGCCGGCCCCGAGT TCTACCGCTACCTGCCCCTCAGCGCCAACCAGAACTTCGACCGCTTCGCCGAGCCCTACAACACGAGCCGCATCC TGACGCCCGACTTCACCGTCAACGAGACGGCCTACAAGGCCTACTCGCCCATCCTGCTCGGGCCCACCTTCTCGC TCTCGTACGGCCTCTCCTTCGCCACCCTCATCTCCACCGTCACCCACGTCGCCCTCTTCTACGGCGCCGACGTCT GGAACCGCGCCTGGGACTCCAAGTACGAGGAGCCCGACGTCCACCTCAAGCTCATGCGCAAGTACAAGGAGGCCC CCGAGTGGTGGTTCCTGTCCATCTTCGCCGTCAGCTTCGCCTTCGGCATGATTGCCTCCCAGGTCTGGAAGACGC ACCTGCCCTGGTGGGCCTACATCATCTGCATCCTCATCGGCGTCGTCCTCTTCATCCCCATCGGCATGGTCCAGG CCATCACCAACCAGCAGACGGGCCTCAACGTCATCACCGAGATGATCGTCGGCTACATGATGCCCGGCCGCCCCG TCGCCATGATGCTCTTCAAGTCGTGGGGCTACATGCTGTCCTACAACGGCCTCAACTACATCTCGGACATGAAGG TCGGCCACTACATGAAGATTCCGCCCCGCAGCATGTTCGCCGCCCAGGCCTTCGCCGTCGTCTGGCTCTCCTTCG TCCAGATCTCCACCTACAACTTCCTGCGCGGCAACATCAAGGGTATCTGCACCAAGGAGCAGGCCCAGGGCCTGA CGTGCCCCAACGCCCGCACCTTTTACAACGCCAGCGTCATCTGGGGCGTCATCGGCCCGGCCAAGGTCTTCGGCG CCGGCAGCATCTACGCCTGGACCAACTGGTTCTGGCTCATCGGCTTCGCCGTGCCCGTCATCCAGTGGGCGGCCG CCCGCCGCTACCCGCGCTCCTGGGCCCGCTACCTCGTCTCGCCCGCCCTGTTCGGCGCCGCCGGCATGATCCCGC CCGCCACCCTCTTCTACCTCTTCCAGTGGGTCATCGTCGGCCTCATCTTCAACTTCTTCATCCGCAGGCGCTTCT TTGGCTGGTGGAGTAAGTGTGCCCCCTTCCCGCGCCCCGGTCACGGTGGTCTCGAGGCTGACGGTGCGCTCGGCA GCGCGCTACAACTATCCGCTCTCGGGCGCCCTCGACATCGGGACCGCCCTGTGCACCGTCATCTCCGGGCTCGGC CTGGGCCTGAGCGAGACGCAGTTCCCCCGGTGGTGGGGCACCGACGTGGTCGGCAACACGCTCGACGCCAACAGC ACCGCCGTCACCAAGACGTTTATGGAAGGCCAGGCGCCCATCGGACCCTCGAGCTGGTAG |