© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3777 |
| Gene name | |
| Location | Contig_2003:635..4002 |
| Strand | + |
| Gene length (bp) | 3367 |
| Transcript length (bp) | 3057 |
| Coding sequence length (bp) | 3057 |
| Protein length (aa) | 1019 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74910|RAF1_SCHPO | Rik1-associated factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=raf1 PE=1 SV=1 | 292 | 819 | 1.0E-20 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.3319 | 0.9032 | 0.1067 | 0.0126 | 0.0437 | 0.0093 | 0.0353 | 0.0192 | 0.0147 | 0.0045 |
| Orthofinder run ID | 4 |
| Orthogroup | 2550 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3777 MQTFIDLTTEDDLPPPPPPPSSRPQGQTFGLRVPCDEPPAKRRRSDDAAFKKRDLKACVQEHVLPHVVRAVARLS REEYAVDSIAIQAVTTLTRSPSFRMSMAEAATSNLPLYYPGADLAAADVVEKLMALPQYQIQSQPASVREKPPAG ATEIKIEQDQTTLSKGPSPNAAKLKLEPRPRLAFRPRNRTKDPDAPQRPYKWLRIKARPYLPAAERDLILQGTKR PLAWRHDAVETWPLVYHVDFTSDEIGQIFTHLSTRYNTEVPQDLDLNWLTALCHRHHVASIVGDGVIPGRSVEDL RNFFTDLMADQACAPDRATVFSLEREVRDARRENRRNSRIPSLLLAREMEGNARFGRMRRFENFQNEFKKAHEDG LSIVAEFTNCAGDISAMSWVPDGNILCGTTAHSDSHNQQYNKPGNLVLCSTSQGTLRAFADHRIPRPLVDKGENS TEAMRQSQDPWLYSSVVSSDYDEVRGRAYTSSFDKTVKVWDIAKDGGFMRCIATWHHDGNVNFVSAAKDGSGRVA SAADVPTQAIRVYTIRADDDDVDGSPFQAISCTRTDADGSDMWAYFPATMQWGRAPGTTHLLIVGYSPRGLANDD RDIPEDKKNSGEIMIWDAARGCRVPVMTATTANVFEVIWHPRLPRFVAATSPCGIIEHGVRTQIHLFQLDLERED GAYSEFQKLDCFASDINELTIMPNSLRHAYVTAGCTDGRTYVWDTAQGDHPVHILQHGYPLDDYSYDREKEDTGV KFTAWGTTPDRLYTGSSDGVVKVWNVRNERPFVRNLLEAPGPISIGAFSPDYSQLAIGDATGRLFLLSLDERDQH GANFTTLPGTNRRIRRPKPFIPHPEPPPPPGNGEADADESDAEGDSELVSAYARRRYLDSGQLVLHRNPVVGAVQ GPAYASTGLFRREAHLGEEPTAPLLTEYERLQRESEHASGARRRRSERRLKNPLAADGNDEDRARRHAANRRLDL DGLRLEFAELWDSMRRERAVLTADEDEDWGFAYEEMPEWEAGA* |
| Coding | >Hirsu2|3777 ATGCAGACCTTCATCGACCTGACTACCGAAGACGACTTGCCGCCGCCGCCGCCGCCGCCATCATCGCGGCCGCAG GGCCAGACGTTCGGCCTTCGCGTTCCGTGCGATGAACCGCCTGCCAAGCGAAGGCGCTCCGACGATGCGGCCTTC AAGAAACGTGACTTGAAGGCCTGCGTCCAAGAGCACGTTCTACCCCACGTCGTCCGAGCCGTGGCTCGCCTCTCC CGAGAGGAATATGCCGTGGACAGCATCGCGATCCAGGCTGTCACGACGCTCACCAGAAGCCCGTCGTTCCGCATG TCTATGGCCGAAGCTGCGACTTCAAACCTACCACTGTACTACCCGGGGGCCGACCTGGCCGCCGCCGATGTCGTC GAGAAGCTCATGGCGCTACCGCAATATCAAATCCAATCCCAACCAGCTTCTGTCAGAGAAAAACCGCCGGCAGGC GCTACAGAGATAAAAATTGAGCAAGATCAAACGACGCTCTCCAAAGGCCCTTCTCCCAACGCAGCCAAGCTTAAG CTCGAGCCTCGACCGCGACTTGCCTTCAGACCGCGCAACAGAACGAAGGACCCTGACGCTCCCCAAAGACCATAC AAGTGGCTTCGAATCAAGGCACGACCGTACCTCCCCGCGGCCGAGCGCGACCTGATTCTTCAGGGCACGAAGCGC CCTCTCGCGTGGCGCCACGATGCCGTGGAGACGTGGCCGCTGGTCTATCACGTGGACTTTACATCAGACGAGATC GGGCAGATTTTCACCCACCTGTCGACCCGTTACAATACCGAGGTCCCTCAGGATCTCGACTTGAACTGGCTGACG GCGTTGTGCCATCGACACCATGTCGCCTCTATCGTCGGCGATGGCGTCATTCCGGGCCGGTCCGTCGAAGATCTG CGTAACTTCTTCACTGATCTCATGGCCGACCAAGCCTGTGCCCCAGATCGAGCCACGGTGTTTTCGCTGGAACGA GAGGTTCGAGATGCACGGAGGGAGAACCGACGCAATAGCCGCATCCCGTCGCTGCTTCTCGCGCGGGAAATGGAG GGAAACGCTCGGTTCGGCCGCATGAGGCGATTCGAGAACTTCCAGAACGAGTTCAAGAAGGCTCACGAGGATGGC TTGTCCATCGTGGCCGAGTTTACAAACTGTGCCGGCGACATCTCGGCCATGTCGTGGGTCCCCGACGGCAACATC CTGTGCGGCACGACGGCCCATTCCGACTCGCACAACCAGCAGTACAACAAGCCCGGGAACCTGGTTCTCTGCTCG ACGTCGCAGGGCACGCTACGCGCCTTCGCCGACCACCGGATCCCGCGGCCGCTGGTAGACAAGGGCGAGAACTCG ACCGAGGCCATGCGCCAGAGCCAGGACCCCTGGCTCTACTCATCCGTCGTCTCGTCCGACTACGACGAGGTACGT GGACGGGCGTACACGTCCAGTTTCGACAAGACGGTCAAGGTATGGGACATCGCCAAGGACGGCGGCTTCATGAGA TGCATAGCAACGTGGCACCACGACGGCAACGTCAACTTCGTGTCGGCGGCCAAGGATGGCTCGGGTCGTGTTGCC TCGGCGGCAGACGTCCCGACCCAGGCGATCCGCGTCTACACGATCCGGGCAGACGACGACGACGTGGACGGGAGC CCCTTCCAGGCCATTTCCTGCACGCGGACCGACGCCGACGGTTCCGACATGTGGGCGTACTTCCCAGCCACGATG CAGTGGGGAAGGGCCCCGGGGACGACTCACCTCCTCATCGTCGGCTACTCGCCGAGGGGCCTGGCCAACGACGAC CGCGACATCCCCGAGGACAAGAAGAACTCGGGCGAGATCATGATATGGGACGCCGCTCGGGGCTGCCGGGTCCCC GTGATGACGGCAACGACGGCCAACGTGTTCGAGGTCATTTGGCATCCCCGGCTGCCGCGCTTCGTCGCCGCCACG TCGCCCTGCGGAATCATCGAGCACGGCGTGCGCACGCAGATTCACCTCTTCCAGCTCGACCTGGAGCGGGAGGAC GGCGCGTACAGCGAGTTCCAGAAGCTCGACTGCTTCGCCTCCGACATCAACGAGCTGACCATCATGCCCAACTCG CTGCGGCACGCCTACGTGACGGCCGGCTGCACCGACGGCAGGACCTACGTCTGGGACACAGCCCAGGGCGACCAC CCGGTCCACATCCTGCAGCACGGCTACCCGCTCGACGACTACTCGTACGACCGTGAGAAGGAGGACACGGGCGTC AAGTTCACGGCCTGGGGCACGACGCCGGACAGGCTCTACACCGGCTCGAGCGACGGCGTTGTCAAGGTGTGGAAC GTGCGGAACGAGAGGCCCTTTGTGCGCAACCTGCTGGAGGCCCCCGGCCCCATCTCCATCGGCGCCTTCTCGCCG GACTACTCGCAACTGGCCATCGGCGACGCGACAGGACGCCTGTTTCTGCTCTCGCTGGACGAGCGCGATCAGCAC GGGGCCAACTTTACGACGCTGCCGGGGACGAACCGCAGGATCCGGCGCCCGAAACCGTTCATCCCCCACCCGGAG CCGCCGCCGCCGCCCGGGAACGGGGAGGCGGACGCGGACGAATCGGATGCGGAAGGCGACTCGGAGCTCGTCTCC GCCTACGCGCGGCGGCGGTACCTCGACTCGGGCCAGCTCGTCCTGCACCGCAACCCGGTCGTCGGGGCGGTGCAG GGCCCCGCGTACGCGTCGACGGGCCTGTTCCGGCGCGAGGCGCACCTGGGCGAGGAGCCGACGGCGCCGCTGCTG ACCGAGTACGAGCGGCTGCAGCGCGAGAGCGAGCACGCGAGCGGCGCGCGCCGGCGCCGCTCGGAGCGCCGCCTC AAGAACCCGTTGGCCGCCGACGGCAACGACGAAGACCGCGCGCGCCGCCACGCCGCCAACCGCCGCCTCGACCTC GACGGGCTGCGGCTGGAGTTTGCGGAGCTGTGGGACAGCATGCGGCGCGAGCGGGCGGTGCTGACGGCCGACGAG GACGAGGACTGGGGCTTTGCGTACGAGGAGATGCCGGAGTGGGAGGCGGGGGCATGA |
| Transcript | >Hirsu2|3777 ATGCAGACCTTCATCGACCTGACTACCGAAGACGACTTGCCGCCGCCGCCGCCGCCGCCATCATCGCGGCCGCAG GGCCAGACGTTCGGCCTTCGCGTTCCGTGCGATGAACCGCCTGCCAAGCGAAGGCGCTCCGACGATGCGGCCTTC AAGAAACGTGACTTGAAGGCCTGCGTCCAAGAGCACGTTCTACCCCACGTCGTCCGAGCCGTGGCTCGCCTCTCC CGAGAGGAATATGCCGTGGACAGCATCGCGATCCAGGCTGTCACGACGCTCACCAGAAGCCCGTCGTTCCGCATG TCTATGGCCGAAGCTGCGACTTCAAACCTACCACTGTACTACCCGGGGGCCGACCTGGCCGCCGCCGATGTCGTC GAGAAGCTCATGGCGCTACCGCAATATCAAATCCAATCCCAACCAGCTTCTGTCAGAGAAAAACCGCCGGCAGGC GCTACAGAGATAAAAATTGAGCAAGATCAAACGACGCTCTCCAAAGGCCCTTCTCCCAACGCAGCCAAGCTTAAG CTCGAGCCTCGACCGCGACTTGCCTTCAGACCGCGCAACAGAACGAAGGACCCTGACGCTCCCCAAAGACCATAC AAGTGGCTTCGAATCAAGGCACGACCGTACCTCCCCGCGGCCGAGCGCGACCTGATTCTTCAGGGCACGAAGCGC CCTCTCGCGTGGCGCCACGATGCCGTGGAGACGTGGCCGCTGGTCTATCACGTGGACTTTACATCAGACGAGATC GGGCAGATTTTCACCCACCTGTCGACCCGTTACAATACCGAGGTCCCTCAGGATCTCGACTTGAACTGGCTGACG GCGTTGTGCCATCGACACCATGTCGCCTCTATCGTCGGCGATGGCGTCATTCCGGGCCGGTCCGTCGAAGATCTG CGTAACTTCTTCACTGATCTCATGGCCGACCAAGCCTGTGCCCCAGATCGAGCCACGGTGTTTTCGCTGGAACGA GAGGTTCGAGATGCACGGAGGGAGAACCGACGCAATAGCCGCATCCCGTCGCTGCTTCTCGCGCGGGAAATGGAG GGAAACGCTCGGTTCGGCCGCATGAGGCGATTCGAGAACTTCCAGAACGAGTTCAAGAAGGCTCACGAGGATGGC TTGTCCATCGTGGCCGAGTTTACAAACTGTGCCGGCGACATCTCGGCCATGTCGTGGGTCCCCGACGGCAACATC CTGTGCGGCACGACGGCCCATTCCGACTCGCACAACCAGCAGTACAACAAGCCCGGGAACCTGGTTCTCTGCTCG ACGTCGCAGGGCACGCTACGCGCCTTCGCCGACCACCGGATCCCGCGGCCGCTGGTAGACAAGGGCGAGAACTCG ACCGAGGCCATGCGCCAGAGCCAGGACCCCTGGCTCTACTCATCCGTCGTCTCGTCCGACTACGACGAGGTACGT GGACGGGCGTACACGTCCAGTTTCGACAAGACGGTCAAGGTATGGGACATCGCCAAGGACGGCGGCTTCATGAGA TGCATAGCAACGTGGCACCACGACGGCAACGTCAACTTCGTGTCGGCGGCCAAGGATGGCTCGGGTCGTGTTGCC TCGGCGGCAGACGTCCCGACCCAGGCGATCCGCGTCTACACGATCCGGGCAGACGACGACGACGTGGACGGGAGC CCCTTCCAGGCCATTTCCTGCACGCGGACCGACGCCGACGGTTCCGACATGTGGGCGTACTTCCCAGCCACGATG CAGTGGGGAAGGGCCCCGGGGACGACTCACCTCCTCATCGTCGGCTACTCGCCGAGGGGCCTGGCCAACGACGAC CGCGACATCCCCGAGGACAAGAAGAACTCGGGCGAGATCATGATATGGGACGCCGCTCGGGGCTGCCGGGTCCCC GTGATGACGGCAACGACGGCCAACGTGTTCGAGGTCATTTGGCATCCCCGGCTGCCGCGCTTCGTCGCCGCCACG TCGCCCTGCGGAATCATCGAGCACGGCGTGCGCACGCAGATTCACCTCTTCCAGCTCGACCTGGAGCGGGAGGAC GGCGCGTACAGCGAGTTCCAGAAGCTCGACTGCTTCGCCTCCGACATCAACGAGCTGACCATCATGCCCAACTCG CTGCGGCACGCCTACGTGACGGCCGGCTGCACCGACGGCAGGACCTACGTCTGGGACACAGCCCAGGGCGACCAC CCGGTCCACATCCTGCAGCACGGCTACCCGCTCGACGACTACTCGTACGACCGTGAGAAGGAGGACACGGGCGTC AAGTTCACGGCCTGGGGCACGACGCCGGACAGGCTCTACACCGGCTCGAGCGACGGCGTTGTCAAGGTGTGGAAC GTGCGGAACGAGAGGCCCTTTGTGCGCAACCTGCTGGAGGCCCCCGGCCCCATCTCCATCGGCGCCTTCTCGCCG GACTACTCGCAACTGGCCATCGGCGACGCGACAGGACGCCTGTTTCTGCTCTCGCTGGACGAGCGCGATCAGCAC GGGGCCAACTTTACGACGCTGCCGGGGACGAACCGCAGGATCCGGCGCCCGAAACCGTTCATCCCCCACCCGGAG CCGCCGCCGCCGCCCGGGAACGGGGAGGCGGACGCGGACGAATCGGATGCGGAAGGCGACTCGGAGCTCGTCTCC GCCTACGCGCGGCGGCGGTACCTCGACTCGGGCCAGCTCGTCCTGCACCGCAACCCGGTCGTCGGGGCGGTGCAG GGCCCCGCGTACGCGTCGACGGGCCTGTTCCGGCGCGAGGCGCACCTGGGCGAGGAGCCGACGGCGCCGCTGCTG ACCGAGTACGAGCGGCTGCAGCGCGAGAGCGAGCACGCGAGCGGCGCGCGCCGGCGCCGCTCGGAGCGCCGCCTC AAGAACCCGTTGGCCGCCGACGGCAACGACGAAGACCGCGCGCGCCGCCACGCCGCCAACCGCCGCCTCGACCTC GACGGGCTGCGGCTGGAGTTTGCGGAGCTGTGGGACAGCATGCGGCGCGAGCGGGCGGTGCTGACGGCCGACGAG GACGAGGACTGGGGCTTTGCGTACGAGGAGATGCCGGAGTGGGAGGCGGGGGCATGA |
| Gene | >Hirsu2|3777 ATGCAGTAAGTCGAAGAAGCTCCTTACGCGACGAAGACGCGTCTCTTTTCCCTCGGAGCCTCTCGCGCATCCCCG CCGAGGCCCAGGAGGTCGAGCCTTTGGAGAGCGAGAGCCAGCAGCCCTCGCCACACGTCCGATTCCCGGTGGGCG TCATGCTCACCGCCACGGTTTCTAGGACCTTCATCGACCTGACTACCGAAGACGACTTGCCGCCGCCGCCGCCGC CGCCATCATCGCGGCCGCAGGGCCAGACGTTCGGCCTTCGCGTTCCGTGCGATGAACCGCCTGCCAAGCGAAGGC GCTCCGACGATGCGGCCTTCAAGAAACGTGACTTGAAGGCCTGCGTCCAAGAGCACGTTCTACCCCACGTCGTCC GAGCCGTGGCTCGCCTCTCCCGAGAGGAATATGCCGTGGACAGCATCGCGATCCAGGTACCGCTCCCGTACCGAT CTCTGGCCCGCCACAAGGCTGTCATCTCGTCGCTGACCGGACGCGTCAGGCTGTCACGACGCTCACCAGAAGCCC GTCGTTCCGCATGTCTATGGCCGAAGCTGCGACTTCAAACCTACCACTGTACTACCCGGGGGCCGACCTGGCCGC CGCCGATGTCGTCGAGAAGCTCATGGCGCTACCGGTACGGAATGGGTTCATGCCCGGGCTGCCTCGACGATTGTT GAGCTCCGTTTGCTGACGTGACGTGGGGCAGCAATATCAAATCCAATCCCAACCAGCTTCTGTCAGAGAAAAACC GCCGGCAGGCGCTACAGAGATAAAAATTGAGCAAGATCAAACGACGCTCTCCAAAGGCCCTTCTCCCAACGCAGC CAAGCTTAAGCTCGAGCCTCGACCGCGACTTGCCTTCAGACCGCGCAACAGAACGAAGGACCCTGACGCTCCCCA AAGACCATACAAGTGGCTTCGAATCAAGGCACGACCGTACCTCCCCGCGGCCGAGCGCGACCTGATTCTTCAGGG CACGAAGCGCCCTCTCGCGTGGCGCCACGATGCCGTGGAGACGTGGCCGCTGGTCTATCACGTGGACTTTACATC AGACGAGATCGGGCAGATTTTCACCCACCTGTCGACCCGTTACAATACCGAGGTCCCTCAGGATCTCGACTTGAA CTGGCTGACGGCGTTGTGCCATCGACACCATGTCGCCTCTATCGTCGGCGATGGCGTCATTCCGGGCCGGTCCGT CGAAGATCTGCGTAACTTCTTCACTGATCTCATGGCCGACCAAGCCTGTGCCCCAGATCGAGCCACGGTGTTTTC GCTGGAACGAGAGGTTCGAGATGCACGGAGGGAGAACCGACGCAATAGCCGCATCCCGTCGCTGCTTCTCGCGCG GGAAATGGAGGGAAACGCTCGGTTCGGCCGCATGAGGCGATTCGAGAACTTCCAGAACGAGTTCAAGAAGGCTCA CGAGGATGGCTTGTCCATCGTGGCCGAGTTTACAAACTGTGCCGGCGACATCTCGGCCATGTCGTGGGTCCCCGA CGGCAACATCCTGTGCGGCACGACGGCCCATTCCGACTCGCACAACCAGCAGTACAACAAGCCCGGGAACCTGGT TCTCTGCTCGACGTCGCAGGGCACGCTACGCGCCTTCGCCGACCACCGGATCCCGCGGCCGCTGGTAGACAAGGG CGAGAACTCGACCGAGGCCATGCGCCAGAGCCAGGACCCCTGGCTCTACTCATCCGTCGTCTCGTCCGACTACGA CGAGGTACGTGGACGGGCGTACACGTCCAGTTTCGACAAGACGGTCAAGGTATGGGACATCGCCAAGGACGGCGG CTTCATGAGATGCATAGCAACGTGGCACCACGACGGCAACGTCAACTTCGTGTCGGCGGCCAAGGATGGCTCGGG TCGTGTTGCCTCGGCGGCAGACGTCCCGACCCAGGCGATCCGCGTCTACACGATCCGGGCAGACGACGACGACGT GGACGGGAGCCCCTTCCAGGCCATTTCCTGCACGCGGACCGACGCCGACGGTTCCGACATGTGGGCGTACTTCCC AGCCACGATGCAGTGGGGAAGGGCCCCGGGGACGACTCACCTCCTCATCGTCGGCTACTCGCCGAGGGGCCTGGC CAACGACGACCGCGACATCCCCGAGGACAAGAAGAACTCGGGCGAGATCATGATATGGGACGCCGCTCGGGGCTG CCGGGTCCCCGTGATGACGGCAACGACGGCCAACGTGTTCGAGGTCATTTGGCATCCCCGGCTGCCGCGCTTCGT CGCCGCCACGTCGCCCTGCGGAATCATCGAGCACGGCGTGCGCACGCAGATTCACCTCTTCCAGCTCGACCTGGA GCGGGAGGACGGCGCGTACAGCGAGTTCCAGAAGCTCGACTGCTTCGCCTCCGACATCAACGAGCTGACCATCAT GCCCAACTCGCTGCGGCACGCCTACGTGACGGCCGGCTGCACCGACGGCAGGACCTACGTCTGGGACACAGCCCA GGGCGACCACCCGGTCCACATCCTGCAGCACGGCTACCCGCTCGACGACTACTCGTACGACCGTGAGAAGGAGGA CACGGGCGTCAAGTTCACGGCCTGGGGCACGACGCCGGACAGGCTCTACACCGGCTCGAGCGACGGCGTTGTCAA GGTGTGGAACGTGCGGAACGAGAGGCCCTTTGTGCGCAACCTGCTGGAGGCCCCCGGCCCCATCTCCATCGGCGC CTTCTCGCCGGACTACTCGCAACTGGCCATCGGCGACGCGACAGGACGCCTGTTTCTGCTCTCGCTGGACGAGCG CGATCAGCACGGGGCCAACTTTACGACGCTGCCGGGGACGAACCGCAGGATCCGGCGCCCGAAACCGTTCATCCC CCACCCGGAGCCGCCGCCGCCGCCCGGGAACGGGGAGGCGGACGCGGACGAATCGGATGCGGAAGGCGACTCGGA GCTCGTCTCCGCCTACGCGCGGCGGCGGTACCTCGACTCGGGCCAGCTCGTCCTGCACCGCAACCCGGTCGTCGG GGCGGTGCAGGGCCCCGCGTACGCGTCGACGGGCCTGTTCCGGCGCGAGGCGCACCTGGGCGAGGAGCCGACGGC GCCGCTGCTGACCGAGTACGAGCGGCTGCAGCGCGAGAGCGAGCACGCGAGCGGCGCGCGCCGGCGCCGCTCGGA GCGCCGCCTCAAGAACCCGTTGGCCGCCGACGGCAACGACGAAGACCGCGCGCGCCGCCACGCCGCCAACCGCCG CCTCGACCTCGACGGGCTGCGGCTGGAGTTTGCGGAGCTGTGGGACAGCATGCGGCGCGAGCGGGCGGTGCTGAC GGCCGACGAGGACGAGGACTGGGGCTTTGCGTACGAGGAGATGCCGGAGTGGGAGGCGGGGGCATGA |