© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3775 |
| Gene name | |
| Location | Contig_2002:23..411 |
| Strand | + |
| Gene length (bp) | 388 |
| Transcript length (bp) | 333 |
| Coding sequence length (bp) | 333 |
| Protein length (aa) | 111 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q96QU6|1A1L1_HUMAN | 1-aminocyclopropane-1-carboxylate synthase-like protein 1 OS=Homo sapiens GN=ACCS PE=1 SV=1 | 1 | 103 | 6.0E-12 |
| sp|Q5E9H2|1A1L1_BOVIN | 1-aminocyclopropane-1-carboxylate synthase-like protein 1 OS=Bos taurus GN=ACCS PE=2 SV=1 | 1 | 99 | 7.0E-10 |
| sp|A2AIG8|1A1L1_MOUSE | 1-aminocyclopropane-1-carboxylate synthase-like protein 1 OS=Mus musculus GN=Accs PE=2 SV=1 | 1 | 102 | 2.0E-08 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Peroxisomal targeting signal | 0.6586 | 0.2542 | 0.1258 | 0.1291 | 0.4506 | 0.179 | 0.3777 | 0.2484 | 0.279 | 0.5247 |
| Orthofinder run ID | 4 |
| Orthogroup | 9429 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3775 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3775 LAAAYRHATAALDGIGVAYLRGGNAGFFLWIDLSPHLPPPEDGDGLGPDFALARRLLDAGVFLHPGEEHSLRPGW FRMVYTQPPDVVSEGIRRIQQVISSASSSSAAAAG* |
| Coding | >Hirsu2|3775 CTGGCGGCCGCCTACCGCCACGCCACGGCCGCGCTCGACGGCATCGGCGTCGCCTACCTGCGCGGCGGCAACGCC GGCTTCTTCCTCTGGATCGACCTGTCGCCGCACCTGCCGCCGCCCGAGGACGGCGACGGCCTCGGCCCCGACTTC GCCCTGGCCCGCCGCCTGCTCGACGCCGGCGTCTTCCTCCACCCGGGCGAGGAGCACTCGCTGCGGCCCGGCTGG TTCCGCATGGTGTACACGCAGCCGCCCGACGTCGTCAGCGAGGGCATCCGGCGGATCCAACAGGTCATTTCTTCT GCCTCTTCTTCCTCGGCGGCGGCGGCGGGTTAG |
| Transcript | >Hirsu2|3775 CTGGCGGCCGCCTACCGCCACGCCACGGCCGCGCTCGACGGCATCGGCGTCGCCTACCTGCGCGGCGGCAACGCC GGCTTCTTCCTCTGGATCGACCTGTCGCCGCACCTGCCGCCGCCCGAGGACGGCGACGGCCTCGGCCCCGACTTC GCCCTGGCCCGCCGCCTGCTCGACGCCGGCGTCTTCCTCCACCCGGGCGAGGAGCACTCGCTGCGGCCCGGCTGG TTCCGCATGGTGTACACGCAGCCGCCCGACGTCGTCAGCGAGGGCATCCGGCGGATCCAACAGGTCATTTCTTCT GCCTCTTCTTCCTCGGCGGCGGCGGCGGGTTAG |
| Gene | >Hirsu2|3775 CTGGCGGCCGCCTACCGCCACGCCACGGCCGCGCTCGACGGCATCGGCGTCGCCTACCTGCGCGGCGGCAACGCC GGCTTCTTCCTCTGGATCGACCTGTCGCCGCACCTGCCGCCGCCCGAGGACGGCGACGGCCTCGGCCCCGACTTC GCCCTGGCCCGCCGCCTGCTCGACGCCGGCGTCTTCCTCCACCCGGGCGAGGAGCACTCGCTGCGGCCCGGCTGG TTCCGCATGGTGTACACGCAGCCGCCCGACGTCGTCAGCGAGGGCATCCGGCGGTACGTGAGAGCTTGTCTGGAG GGGGTTGCCGGGCTGACGCGTCGCTGTTTGCAGGATCCAACAGGTCATTTCTTCTGCCTCTTCTTCCTCGGCGGC GGCGGCGGGTTAG |