© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3770 |
| Gene name | |
| Location | Contig_2000:83..1199 |
| Strand | + |
| Gene length (bp) | 1116 |
| Transcript length (bp) | 1116 |
| Coding sequence length (bp) | 1116 |
| Protein length (aa) | 372 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.572 | 0.5794 | 0.1334 | 0.0726 | 0.473 | 0.0223 | 0.1224 | 0.1059 | 0.0814 | 0.016 |
| Orthofinder run ID | 4 |
| Orthogroup | 7014 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|2522 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|5451 |
| Ophiocordyceps subramaniannii | Hirsu2|3770 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3770 MASAILPSEILLLVLNECDVQTANSMCAIPVLGSLVQRYARSIIKTIVSPHLDGAVMEGKHMMWYDVDPTKHDFQ QPQIVPTISWEALTVLKRREAWVARLLAPGGRFLEGRTDNVWRGLSGEAERQALLAMAREGLWFCDQMSDLEAGV IAGCDSANNFATAGVAGRSVEHTVAEQQWLRRPPTLARGAERSRRQMLKMRENCLRWEVRRERGHYIRQLETRQL LCIMLVLRLTQNHQQFPAFDPAMERGMREAVLRHGSWLLIMLLMKPAEPRRGHPCHLKQLISSGGKRESFTWQGE TEEETGVTLEQELGRRLKRDGERINDNVQLEAMLRVDEMIRGEQRARPVTFLFAHEERAPIISDASVEWLG* |
| Coding | >Hirsu2|3770 ATGGCGTCGGCAATCCTGCCCAGCGAGATCCTCTTGCTCGTCTTGAACGAGTGCGACGTCCAGACGGCCAACTCC ATGTGCGCGATACCCGTCCTCGGCTCGCTCGTGCAGCGGTACGCGAGGAGCATCATCAAGACCATCGTCAGCCCA CACCTGGACGGGGCCGTCATGGAGGGCAAGCACATGATGTGGTACGACGTCGACCCGACGAAGCACGACTTCCAG CAGCCGCAGATCGTGCCGACCATCAGCTGGGAGGCGCTCACCGTGTTGAAGAGGCGTGAAGCGTGGGTGGCGCGC TTGCTGGCGCCGGGCGGCCGCTTCCTCGAGGGGCGGACGGACAATGTGTGGCGCGGGCTGAGCGGCGAGGCCGAG CGCCAGGCGCTGCTGGCAATGGCGCGCGAGGGGCTCTGGTTCTGCGACCAGATGAGCGACCTGGAGGCCGGCGTC ATCGCCGGGTGCGACTCGGCCAACAACTTCGCCACGGCCGGGGTAGCGGGGCGGAGCGTGGAGCACACGGTGGCG GAACAACAGTGGCTACGGAGGCCGCCAACGCTGGCGCGGGGCGCCGAACGGAGCCGGCGGCAGATGCTCAAGATG CGGGAGAATTGCTTGCGGTGGGAGGTGCGACGGGAGCGAGGGCATTATATCCGGCAGCTCGAGACGCGGCAGCTG TTGTGCATCATGCTGGTGCTGCGGCTGACGCAAAACCACCAACAATTCCCGGCATTCGACCCGGCGATGGAACGG GGCATGCGGGAGGCGGTGCTGCGGCACGGGAGCTGGCTCCTGATCATGCTGCTGATGAAGCCGGCCGAGCCCCGG AGGGGGCACCCTTGCCACTTGAAGCAGCTCATCAGCAGCGGGGGGAAGCGTGAGAGCTTCACGTGGCAGGGAGAG ACGGAGGAGGAGACGGGGGTGACGCTGGAGCAGGAGCTGGGGCGGAGGCTGAAGCGGGACGGGGAGCGGATCAAC GACAACGTGCAGCTGGAGGCGATGCTCAGGGTGGACGAGATGATCCGGGGGGAGCAGAGGGCGCGACCGGTGACG TTTCTGTTTGCGCACGAGGAGAGGGCCCCGATCATCAGTGACGCCAGCGTCGAATGGCTGGGCTGA |
| Transcript | >Hirsu2|3770 ATGGCGTCGGCAATCCTGCCCAGCGAGATCCTCTTGCTCGTCTTGAACGAGTGCGACGTCCAGACGGCCAACTCC ATGTGCGCGATACCCGTCCTCGGCTCGCTCGTGCAGCGGTACGCGAGGAGCATCATCAAGACCATCGTCAGCCCA CACCTGGACGGGGCCGTCATGGAGGGCAAGCACATGATGTGGTACGACGTCGACCCGACGAAGCACGACTTCCAG CAGCCGCAGATCGTGCCGACCATCAGCTGGGAGGCGCTCACCGTGTTGAAGAGGCGTGAAGCGTGGGTGGCGCGC TTGCTGGCGCCGGGCGGCCGCTTCCTCGAGGGGCGGACGGACAATGTGTGGCGCGGGCTGAGCGGCGAGGCCGAG CGCCAGGCGCTGCTGGCAATGGCGCGCGAGGGGCTCTGGTTCTGCGACCAGATGAGCGACCTGGAGGCCGGCGTC ATCGCCGGGTGCGACTCGGCCAACAACTTCGCCACGGCCGGGGTAGCGGGGCGGAGCGTGGAGCACACGGTGGCG GAACAACAGTGGCTACGGAGGCCGCCAACGCTGGCGCGGGGCGCCGAACGGAGCCGGCGGCAGATGCTCAAGATG CGGGAGAATTGCTTGCGGTGGGAGGTGCGACGGGAGCGAGGGCATTATATCCGGCAGCTCGAGACGCGGCAGCTG TTGTGCATCATGCTGGTGCTGCGGCTGACGCAAAACCACCAACAATTCCCGGCATTCGACCCGGCGATGGAACGG GGCATGCGGGAGGCGGTGCTGCGGCACGGGAGCTGGCTCCTGATCATGCTGCTGATGAAGCCGGCCGAGCCCCGG AGGGGGCACCCTTGCCACTTGAAGCAGCTCATCAGCAGCGGGGGGAAGCGTGAGAGCTTCACGTGGCAGGGAGAG ACGGAGGAGGAGACGGGGGTGACGCTGGAGCAGGAGCTGGGGCGGAGGCTGAAGCGGGACGGGGAGCGGATCAAC GACAACGTGCAGCTGGAGGCGATGCTCAGGGTGGACGAGATGATCCGGGGGGAGCAGAGGGCGCGACCGGTGACG TTTCTGTTTGCGCACGAGGAGAGGGCCCCGATCATCAGTGACGCCAGCGTCGAATGGCTGGGCTGA |
| Gene | >Hirsu2|3770 ATGGCGTCGGCAATCCTGCCCAGCGAGATCCTCTTGCTCGTCTTGAACGAGTGCGACGTCCAGACGGCCAACTCC ATGTGCGCGATACCCGTCCTCGGCTCGCTCGTGCAGCGGTACGCGAGGAGCATCATCAAGACCATCGTCAGCCCA CACCTGGACGGGGCCGTCATGGAGGGCAAGCACATGATGTGGTACGACGTCGACCCGACGAAGCACGACTTCCAG CAGCCGCAGATCGTGCCGACCATCAGCTGGGAGGCGCTCACCGTGTTGAAGAGGCGTGAAGCGTGGGTGGCGCGC TTGCTGGCGCCGGGCGGCCGCTTCCTCGAGGGGCGGACGGACAATGTGTGGCGCGGGCTGAGCGGCGAGGCCGAG CGCCAGGCGCTGCTGGCAATGGCGCGCGAGGGGCTCTGGTTCTGCGACCAGATGAGCGACCTGGAGGCCGGCGTC ATCGCCGGGTGCGACTCGGCCAACAACTTCGCCACGGCCGGGGTAGCGGGGCGGAGCGTGGAGCACACGGTGGCG GAACAACAGTGGCTACGGAGGCCGCCAACGCTGGCGCGGGGCGCCGAACGGAGCCGGCGGCAGATGCTCAAGATG CGGGAGAATTGCTTGCGGTGGGAGGTGCGACGGGAGCGAGGGCATTATATCCGGCAGCTCGAGACGCGGCAGCTG TTGTGCATCATGCTGGTGCTGCGGCTGACGCAAAACCACCAACAATTCCCGGCATTCGACCCGGCGATGGAACGG GGCATGCGGGAGGCGGTGCTGCGGCACGGGAGCTGGCTCCTGATCATGCTGCTGATGAAGCCGGCCGAGCCCCGG AGGGGGCACCCTTGCCACTTGAAGCAGCTCATCAGCAGCGGGGGGAAGCGTGAGAGCTTCACGTGGCAGGGAGAG ACGGAGGAGGAGACGGGGGTGACGCTGGAGCAGGAGCTGGGGCGGAGGCTGAAGCGGGACGGGGAGCGGATCAAC GACAACGTGCAGCTGGAGGCGATGCTCAGGGTGGACGAGATGATCCGGGGGGAGCAGAGGGCGCGACCGGTGACG TTTCTGTTTGCGCACGAGGAGAGGGCCCCGATCATCAGTGACGCCAGCGTCGAATGGCTGGGCTGA |