© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3766 |
| Gene name | |
| Location | Contig_200:17489..17909 |
| Strand | - |
| Gene length (bp) | 420 |
| Transcript length (bp) | 420 |
| Coding sequence length (bp) | 420 |
| Protein length (aa) | 140 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.2659 | 0.2229 | 0.4604 | 0.3076 | 0.3559 | 0.1445 | 0.4592 | 0.2699 | 0.2257 | 0.0098 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 76 | 98 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 7013 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-rufipedis | Ophun1|2605 |
| Ophiocordyceps kimflemingae | Ophio5|5489 |
| Ophiocordyceps subramaniannii | Hirsu2|3766 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3766 MRHVEALVARGASACANDAVKFPGSSCAASFFFSPPQKNLFVRANIAHHPPEARKAAAAETPSLNPSFQAPSMVS QAVGIVLVVLFLSIGLGFVAFLAKRQVRRFANVLLDDRVQRRRERGQPEPEAAESEAAAPATST* |
| Coding | >Hirsu2|3766 ATGCGTCACGTAGAGGCGTTGGTTGCTCGGGGAGCGAGCGCATGTGCAAACGACGCCGTGAAATTTCCAGGCTCT TCCTGCGCCGCTTCGTTCTTCTTCTCTCCTCCTCAAAAAAACCTTTTCGTACGAGCCAACATCGCCCATCATCCT CCCGAGGCAAGGAAAGCCGCTGCTGCAGAAACCCCCTCCCTCAACCCCAGCTTTCAAGCCCCCAGCATGGTGTCG CAAGCAGTGGGCATCGTCCTCGTCGTCCTCTTCCTCTCCATCGGACTCGGTTTTGTCGCATTCCTGGCCAAGAGG CAGGTCCGCCGGTTCGCCAACGTGTTACTCGACGACCGGGTCCAGCGCCGGCGGGAGCGAGGCCAGCCCGAGCCC GAGGCTGCGGAGTCGGAAGCTGCCGCGCCCGCGACCAGCACTTGA |
| Transcript | >Hirsu2|3766 ATGCGTCACGTAGAGGCGTTGGTTGCTCGGGGAGCGAGCGCATGTGCAAACGACGCCGTGAAATTTCCAGGCTCT TCCTGCGCCGCTTCGTTCTTCTTCTCTCCTCCTCAAAAAAACCTTTTCGTACGAGCCAACATCGCCCATCATCCT CCCGAGGCAAGGAAAGCCGCTGCTGCAGAAACCCCCTCCCTCAACCCCAGCTTTCAAGCCCCCAGCATGGTGTCG CAAGCAGTGGGCATCGTCCTCGTCGTCCTCTTCCTCTCCATCGGACTCGGTTTTGTCGCATTCCTGGCCAAGAGG CAGGTCCGCCGGTTCGCCAACGTGTTACTCGACGACCGGGTCCAGCGCCGGCGGGAGCGAGGCCAGCCCGAGCCC GAGGCTGCGGAGTCGGAAGCTGCCGCGCCCGCGACCAGCACTTGA |
| Gene | >Hirsu2|3766 ATGCGTCACGTAGAGGCGTTGGTTGCTCGGGGAGCGAGCGCATGTGCAAACGACGCCGTGAAATTTCCAGGCTCT TCCTGCGCCGCTTCGTTCTTCTTCTCTCCTCCTCAAAAAAACCTTTTCGTACGAGCCAACATCGCCCATCATCCT CCCGAGGCAAGGAAAGCCGCTGCTGCAGAAACCCCCTCCCTCAACCCCAGCTTTCAAGCCCCCAGCATGGTGTCG CAAGCAGTGGGCATCGTCCTCGTCGTCCTCTTCCTCTCCATCGGACTCGGTTTTGTCGCATTCCTGGCCAAGAGG CAGGTCCGCCGGTTCGCCAACGTGTTACTCGACGACCGGGTCCAGCGCCGGCGGGAGCGAGGCCAGCCCGAGCCC GAGGCTGCGGAGTCGGAAGCTGCCGCGCCCGCGACCAGCACTTGA |