Protein ID | Hirsu2|3764 |
Gene name | |
Location | Contig_200:13066..15497 |
Strand | + |
Gene length (bp) | 2431 |
Transcript length (bp) | 2019 |
Coding sequence length (bp) | 2019 |
Protein length (aa) | 673 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10360 | DUF2433 | Protein of unknown function (DUF2433) | 2.0E-49 | 278 | 407 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O42947|YBPC_SCHPO | Uncharacterized protein C16H5.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16H5.12c PE=1 SV=3 | 42 | 407 | 1.0E-121 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | Nuclear localization signal | 0.6474 | 0.4861 | 0.389 | 0.103 | 0.1431 | 0.0076 | 0.1132 | 0.0082 | 0.0903 | 0.0021 |
Orthofinder run ID | 4 |
Orthogroup | 2545 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3764 MAAPRPYNNPGYLQNGATGLPQPGAAPLLPNQGRVIQTGPIRVLCIADVRGNLRSLNDLAKQARADHIIHTGDFG FYDDTSLDRIVEKTLKHVAQYSPLISEPVKKAIQQGGNGPVKSRFAPQELPLSELPLLLSGELKLDVPVYTVWGA CEDVRVLEKFRSSEYKVPNLHIIDEARSMLLEIGGVKLRLLGLGGAVVMHKLFDNGEGRTTIAGGQGTMWTTLLQ MGELVDTAHRVYDPTETRIFITHASPAREGILNQLSVTLKADFSISAGLHFRYGSSYNEFSVNPTLDHYRGKLAA SKASFNDVWETVKGEVEPAIQQNEAQQNLLKNALQIVEKMPTTAAGGNPFGGPAAGQAALGQVDESAFKNMWNFN LADAAFGYLVLEIQDGRIGTEMRAQGFNFSHRGAKQQPGASTGPPPASAGGQPSPATTSAQLAPPPQTSRQPSQP PKASAATPTSGGTKPGTPKPGPGTDSAGTASKDPEKTPAAANGSANGPELTASPAPKSLASDIIGLFIMNVSGEE QCRDLFDEEDKGKIVRVEKWGMQNKVVHFKTPEERDAAMARLPDDVKTRTQEDRSKPLVKIFQHREGKAFTNRGG AGNWGGNARGGSSASGYRSAGGTSDSESNRRGGRGGRGGRGGDRSRGGRGRGGIKGDTGTSSPAAPATPAAE* |
Coding | >Hirsu2|3764 ATGGCTGCTCCGCGACCGTACAACAATCCAGGTTATCTCCAAAACGGCGCCACGGGGCTTCCCCAGCCTGGGGCA GCGCCTCTCCTGCCGAACCAAGGCCGCGTGATCCAGACCGGCCCCATCAGAGTGCTCTGCATTGCAGATGTTCGC GGAAACCTGAGATCGCTCAACGACCTGGCTAAGCAGGCTCGCGCCGACCACATCATCCACACCGGCGACTTTGGC TTCTACGACGATACCTCGCTGGACCGAATCGTGGAGAAAACACTCAAGCATGTGGCCCAATACTCGCCTCTCATC TCCGAACCCGTCAAGAAGGCAATCCAACAAGGGGGCAACGGCCCCGTCAAGAGTCGGTTTGCTCCCCAGGAGCTG CCCCTGTCGGAGCTGCCGCTCCTGCTCAGCGGAGAGCTCAAGCTAGACGTGCCCGTCTACACCGTCTGGGGCGCG TGCGAGGACGTCCGTGTGTTGGAGAAATTCAGGTCCTCCGAGTACAAGGTGCCCAATCTGCACATCATCGACGAG GCTCGCTCCATGCTCCTCGAAATCGGTGGCGTCAAGCTCAGGCTGCTTGGCCTCGGCGGTGCCGTCGTCATGCAC AAGCTTTTTGACAATGGCGAGGGCCGTACCACCATTGCCGGTGGCCAGGGCACCATGTGGACTACTCTGCTGCAG ATGGGAGAGCTTGTCGACACAGCCCATCGCGTTTACGACCCCACCGAGACCCGAATCTTCATCACACACGCATCG CCCGCGCGCGAGGGCATCCTGAACCAGCTTTCCGTCACGCTCAAGGCCGACTTCTCCATTTCGGCCGGTCTCCAC TTCCGGTACGGCAGCTCCTACAACGAATTCAGCGTCAACCCAACGCTGGACCACTACCGCGGGAAGCTCGCCGCC TCCAAGGCCTCGTTCAACGACGTCTGGGAGACGGTCAAGGGAGAGGTTGAGCCCGCCATTCAGCAGAACGAGGCC CAGCAGAATCTCCTCAAGAACGCGCTCCAGATTGTAGAGAAGATGCCCACCACGGCGGCCGGCGGTAACCCGTTT GGTGGACCCGCTGCCGGTCAAGCTGCGCTCGGCCAGGTGGATGAGAGCGCATTCAAGAACATGTGGAACTTCAAC CTCGCCGACGCAGCCTTTGGCTATCTCGTTTTGGAGATTCAAGACGGTCGCATCGGCACCGAGATGCGCGCACAG GGCTTCAACTTCTCCCATCGCGGCGCAAAGCAACAGCCCGGCGCGTCGACTGGCCCTCCGCCGGCATCCGCGGGC GGCCAACCTTCGCCCGCGACCACCTCTGCGCAGCTGGCACCCCCCCCGCAAACTAGCCGGCAGCCGTCCCAGCCG CCCAAAGCATCGGCTGCGACGCCGACGTCTGGCGGCACAAAACCGGGAACCCCCAAGCCGGGCCCGGGCACAGAT AGCGCCGGCACCGCCAGCAAAGACCCCGAGAAGACGCCCGCGGCGGCAAACGGATCCGCCAACGGCCCCGAGCTT ACCGCATCGCCTGCCCCCAAGTCTCTTGCCTCGGACATCATCGGCCTGTTCATCATGAACGTCAGCGGTGAGGAA CAGTGCCGGGACTTGTTTGATGAGGAAGACAAGGGCAAGATTGTCAGGGTGGAGAAGTGGGGGATGCAGAACAAG GTGGTGCACTTCAAGACGCCTGAGGAACGAGACGCCGCCATGGCCCGACTGCCCGACGACGTCAAGACGCGAACC CAAGAAGACCGGTCGAAGCCGCTGGTGAAGATCTTCCAGCACCGCGAGGGCAAGGCCTTCACCAACCGCGGTGGC GCCGGCAACTGGGGAGGCAACGCTCGCGGAGGCAGCTCCGCGAGTGGTTATCGAAGCGCAGGGGGCACCAGCGAC TCGGAAAGCAACCGCCGGGGCGGTCGCGGGGGTCGCGGGGGCCGCGGCGGCGACAGGAGCCGCGGAGGGCGAGGC CGCGGAGGGATCAAGGGCGACACTGGCACTTCTTCTCCGGCAGCGCCGGCCACGCCGGCCGCCGAATGA |
Transcript | >Hirsu2|3764 ATGGCTGCTCCGCGACCGTACAACAATCCAGGTTATCTCCAAAACGGCGCCACGGGGCTTCCCCAGCCTGGGGCA GCGCCTCTCCTGCCGAACCAAGGCCGCGTGATCCAGACCGGCCCCATCAGAGTGCTCTGCATTGCAGATGTTCGC GGAAACCTGAGATCGCTCAACGACCTGGCTAAGCAGGCTCGCGCCGACCACATCATCCACACCGGCGACTTTGGC TTCTACGACGATACCTCGCTGGACCGAATCGTGGAGAAAACACTCAAGCATGTGGCCCAATACTCGCCTCTCATC TCCGAACCCGTCAAGAAGGCAATCCAACAAGGGGGCAACGGCCCCGTCAAGAGTCGGTTTGCTCCCCAGGAGCTG CCCCTGTCGGAGCTGCCGCTCCTGCTCAGCGGAGAGCTCAAGCTAGACGTGCCCGTCTACACCGTCTGGGGCGCG TGCGAGGACGTCCGTGTGTTGGAGAAATTCAGGTCCTCCGAGTACAAGGTGCCCAATCTGCACATCATCGACGAG GCTCGCTCCATGCTCCTCGAAATCGGTGGCGTCAAGCTCAGGCTGCTTGGCCTCGGCGGTGCCGTCGTCATGCAC AAGCTTTTTGACAATGGCGAGGGCCGTACCACCATTGCCGGTGGCCAGGGCACCATGTGGACTACTCTGCTGCAG ATGGGAGAGCTTGTCGACACAGCCCATCGCGTTTACGACCCCACCGAGACCCGAATCTTCATCACACACGCATCG CCCGCGCGCGAGGGCATCCTGAACCAGCTTTCCGTCACGCTCAAGGCCGACTTCTCCATTTCGGCCGGTCTCCAC TTCCGGTACGGCAGCTCCTACAACGAATTCAGCGTCAACCCAACGCTGGACCACTACCGCGGGAAGCTCGCCGCC TCCAAGGCCTCGTTCAACGACGTCTGGGAGACGGTCAAGGGAGAGGTTGAGCCCGCCATTCAGCAGAACGAGGCC CAGCAGAATCTCCTCAAGAACGCGCTCCAGATTGTAGAGAAGATGCCCACCACGGCGGCCGGCGGTAACCCGTTT GGTGGACCCGCTGCCGGTCAAGCTGCGCTCGGCCAGGTGGATGAGAGCGCATTCAAGAACATGTGGAACTTCAAC CTCGCCGACGCAGCCTTTGGCTATCTCGTTTTGGAGATTCAAGACGGTCGCATCGGCACCGAGATGCGCGCACAG GGCTTCAACTTCTCCCATCGCGGCGCAAAGCAACAGCCCGGCGCGTCGACTGGCCCTCCGCCGGCATCCGCGGGC GGCCAACCTTCGCCCGCGACCACCTCTGCGCAGCTGGCACCCCCCCCGCAAACTAGCCGGCAGCCGTCCCAGCCG CCCAAAGCATCGGCTGCGACGCCGACGTCTGGCGGCACAAAACCGGGAACCCCCAAGCCGGGCCCGGGCACAGAT AGCGCCGGCACCGCCAGCAAAGACCCCGAGAAGACGCCCGCGGCGGCAAACGGATCCGCCAACGGCCCCGAGCTT ACCGCATCGCCTGCCCCCAAGTCTCTTGCCTCGGACATCATCGGCCTGTTCATCATGAACGTCAGCGGTGAGGAA CAGTGCCGGGACTTGTTTGATGAGGAAGACAAGGGCAAGATTGTCAGGGTGGAGAAGTGGGGGATGCAGAACAAG GTGGTGCACTTCAAGACGCCTGAGGAACGAGACGCCGCCATGGCCCGACTGCCCGACGACGTCAAGACGCGAACC CAAGAAGACCGGTCGAAGCCGCTGGTGAAGATCTTCCAGCACCGCGAGGGCAAGGCCTTCACCAACCGCGGTGGC GCCGGCAACTGGGGAGGCAACGCTCGCGGAGGCAGCTCCGCGAGTGGTTATCGAAGCGCAGGGGGCACCAGCGAC TCGGAAAGCAACCGCCGGGGCGGTCGCGGGGGTCGCGGGGGCCGCGGCGGCGACAGGAGCCGCGGAGGGCGAGGC CGCGGAGGGATCAAGGGCGACACTGGCACTTCTTCTCCGGCAGCGCCGGCCACGCCGGCCGCCGAATGA |
Gene | >Hirsu2|3764 ATGGCTGCTGTGAGTTGCTCCCCCTTGGCCTCTTCTCTGCTGTCGCCCCCAAGCCCGTGCCTCGGGCAGCTGCAA GGCATCGTCGCCTGCGTCTGCCTGCGGACCGTCAGCTTCGTCTTCCCCTGGCACGGCGACTCGGCCCTCCGTCTT CCCTCAGCACCTCCTGCACGCCACTCCAGCCCCAGCATCGTCAACTCCATCGCTCTTCCTCGCCTGCGTGGCATG CTTTTTGCATCCAAACCGCCCACAGATCCCCGCCCCTCCCGCCGTCATGGCATCGTCGCCTGCCCTCGACCGTCG CCGTCCGCCCTGGAGCAAGTCGCAGGGCCCCCGCAGCGTCGCTGACTCTTCGCAGCCGCGACCGTACAACAATCC AGGTTATCTCCAAAACGGCGCCACGGGGCTTCCCCAGCCTGGGGCAGCGCCTCTCCTGCCGAACCAAGGCCGCGT GATCCAGACCGGCCCCATCAGAGTGCTCTGCATTGCAGATGTTCGCGGTTCGCAGTCCCCCCGCTCCTCTCTCCG CCCGAGCTGACCCGAGAGTCGCTGACGCTGGGAGCCAGGAAACCTGAGATCGCTCAACGACCTGGCTAAGCAGGC TCGCGCCGACCACATCATCCACACCGGCGACTTTGGCTTCTACGACGATACCTCGCTGGACCGAATCGTGGAGAA AACACTCAAGCATGTGGCCCAATACTCGCCTCTCATCTCCGAACCCGTCAAGAAGGCAATCCAACAAGGGGGCAA CGGCCCCGTCAAGAGTCGGTTTGCTCCCCAGGAGCTGCCCCTGTCGGAGCTGCCGCTCCTGCTCAGCGGAGAGCT CAAGCTAGACGTGCCCGTCTACACCGTCTGGGGCGCGTGCGAGGACGTCCGTGTGTTGGAGAAATTCAGGTCCTC CGAGTACAAGGTGCCCAATCTGCACATCATCGACGAGGCTCGCTCCATGCTCCTCGAAATCGGTGGCGTCAAGCT CAGGCTGCTTGGCCTCGGCGGTGCCGTCGTCATGCACAAGCTTTTTGACAATGGCGAGGGCCGTACCACCATTGC CGGTGGCCAGGGCACCATGTGGACTACTCTGCTGCAGATGGGAGAGCTTGTCGACACAGCCCATCGCGTTTACGA CCCCACCGAGACCCGAATCTTCATCACACACGCATCGCCCGCGCGCGAGGGCATCCTGAACCAGCTTTCCGTCAC GCTCAAGGCCGACTTCTCCATTTCGGCCGGTCTCCACTTCCGGTACGGCAGCTCCTACAACGAATTCAGCGTCAA CCCAACGCTGGACCACTACCGCGGGAAGCTCGCCGCCTCCAAGGCCTCGTTCAACGACGTCTGGGAGACGGTCAA GGGAGAGGTTGAGCCCGCCATTCAGCAGAACGAGGCCCAGCAGAATCTCCTCAAGAACGCGCTCCAGATTGTAGA GAAGATGCCCACCACGGCGGCCGGCGGTAACCCGTTTGGTGGACCCGCTGCCGGTCAAGCTGCGCTCGGCCAGGT GGATGAGAGCGCATTCAAGAACATGTGGAACTTCAACCTCGCCGACGCAGCCTTTGGCTATCTCGTTTTGGAGAT TCAAGACGGTCGCATCGGCACCGAGATGCGCGCACAGGGCTTCAACTTCTCCCATCGCGGCGCAAAGCAACAGCC CGGCGCGTCGACTGGCCCTCCGCCGGCATCCGCGGGCGGCCAACCTTCGCCCGCGACCACCTCTGCGCAGCTGGC ACCCCCCCCGCAAACTAGCCGGCAGCCGTCCCAGCCGCCCAAAGCATCGGCTGCGACGCCGACGTCTGGCGGCAC AAAACCGGGAACCCCCAAGCCGGGCCCGGGCACAGATAGCGCCGGCACCGCCAGCAAAGACCCCGAGAAGACGCC CGCGGCGGCAAACGGATCCGCCAACGGCCCCGAGCTTACCGCATCGCCTGCCCCCAAGTCTCTTGCCTCGGACAT CATCGGCCTGTTCATCATGAACGTCAGCGGTGAGGAACAGTGCCGGGACTTGTTTGATGAGGAAGACAAGGGCAA GATTGTCAGGGTGGAGAAGTGGGGGATGCAGAACAAGGTGGTGCACTTCAAGACGCCTGAGGAACGAGACGCCGC CATGGCCCGACTGCCCGACGACGTCAAGACGCGAACCCAAGAAGACCGGTCGAAGCCGCTGGTGAAGATCTTCCA GCACCGCGAGGGCAAGGCCTTCACCAACCGCGGTGGCGCCGGCAACTGGGGAGGCAACGCTCGCGGAGGCAGCTC CGCGAGTGGTTATCGAAGCGCAGGGGGCACCAGCGACTCGGAAAGCAACCGCCGGGGCGGTCGCGGGGGTCGCGG GGGCCGCGGCGGCGACAGGAGCCGCGGAGGGCGAGGCCGCGGAGGGATCAAGGGCGACACTGGCACTTCTTCTCC GGCAGCGCCGGCCACGCCGGCCGCCGAATGA |