Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3763
Gene name
LocationContig_200:9125..10136
Strand-
Gene length (bp)1011
Transcript length (bp)750
Coding sequence length (bp)750
Protein length (aa) 250

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O14100|ZDS1_SCHPO Protein zds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zds1 PE=1 SV=2 167 239 7.0E-06

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.7014 0.255 0.1762 0.0738 0.2514 0.0061 0.0932 0.1422 0.2226 0.3127

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9426
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|3763 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3763
MMTSSRPRDEIAGRFSSRRGHASQLSISDPSHHVTEAIGTLYGDEDDSGSEGGRPLSFIGGSPHNEQIQRTKLPD
LDERPESQHHADEPSRRPSVPDQQSDPSPFPADHGSLRKARTALVTSSSQRSTSPYDHGSKSPASPTLSLRDVQA
DPTGSQFPLTNIDNPSDIAQELSNLQALRRLSMDVGNNIDPDMPPMGLSAMPVVAPSGDDDENDPSRLLWVPARV
HPELAPTEFKSFLEKRAVPAQSRL*
Coding >Hirsu2|3763
ATGATGACCTCATCCCGACCGCGCGACGAGATTGCTGGCCGCTTCAGCAGTCGACGCGGCCACGCGAGCCAGCTT
TCCATCTCGGACCCAAGCCATCACGTTACGGAAGCCATCGGAACTCTCTACGGCGACGAGGATGATTCCGGCTCC
GAGGGAGGACGGCCCCTGAGCTTCATCGGCGGATCCCCACACAACGAGCAGATACAACGGACCAAGCTCCCGGAC
CTGGACGAACGACCCGAGTCCCAGCACCACGCCGACGAGCCGTCGAGAAGGCCCTCAGTCCCGGACCAGCAGTCC
GACCCCTCCCCCTTCCCAGCCGACCATGGCAGCCTCAGGAAGGCTCGCACCGCCCTCGTGACCAGCTCCTCGCAG
CGAAGCACCAGCCCGTACGACCATGGCTCCAAGTCTCCCGCCTCTCCAACACTATCGCTCAGGGATGTGCAGGCA
GACCCCACAGGCTCTCAGTTTCCCTTGACAAACATCGACAATCCAAGCGACATCGCCCAGGAGCTGAGTAATCTG
CAAGCCTTGAGGCGGCTCTCGATGGACGTCGGCAACAACATTGATCCTGATATGCCGCCTATGGGTCTGTCGGCC
ATGCCCGTGGTGGCTCCCAGTGGAGATGACGACGAAAATGACCCCTCCCGGCTGCTCTGGGTCCCGGCGAGGGTC
CACCCGGAGCTGGCGCCGACAGAATTCAAGTCGTTCCTGGAGAAGCGCGCTGTGCCGGCCCAGAGCCGTCTCTGA
Transcript >Hirsu2|3763
ATGATGACCTCATCCCGACCGCGCGACGAGATTGCTGGCCGCTTCAGCAGTCGACGCGGCCACGCGAGCCAGCTT
TCCATCTCGGACCCAAGCCATCACGTTACGGAAGCCATCGGAACTCTCTACGGCGACGAGGATGATTCCGGCTCC
GAGGGAGGACGGCCCCTGAGCTTCATCGGCGGATCCCCACACAACGAGCAGATACAACGGACCAAGCTCCCGGAC
CTGGACGAACGACCCGAGTCCCAGCACCACGCCGACGAGCCGTCGAGAAGGCCCTCAGTCCCGGACCAGCAGTCC
GACCCCTCCCCCTTCCCAGCCGACCATGGCAGCCTCAGGAAGGCTCGCACCGCCCTCGTGACCAGCTCCTCGCAG
CGAAGCACCAGCCCGTACGACCATGGCTCCAAGTCTCCCGCCTCTCCAACACTATCGCTCAGGGATGTGCAGGCA
GACCCCACAGGCTCTCAGTTTCCCTTGACAAACATCGACAATCCAAGCGACATCGCCCAGGAGCTGAGTAATCTG
CAAGCCTTGAGGCGGCTCTCGATGGACGTCGGCAACAACATTGATCCTGATATGCCGCCTATGGGTCTGTCGGCC
ATGCCCGTGGTGGCTCCCAGTGGAGATGACGACGAAAATGACCCCTCCCGGCTGCTCTGGGTCCCGGCGAGGGTC
CACCCGGAGCTGGCGCCGACAGAATTCAAGTCGTTCCTGGAGAAGCGCGCTGTGCCGGCCCAGAGCCGTCTCTGA
Gene >Hirsu2|3763
ATGATGGTGCGTCCCTCTCCCAGCTTTATGCGCTCTTGTCCGCCTGTCGGAGACGGGCCTGCCACCCCAGGCCCG
GCATGTGAAGCATTTTTGTGCGACGGGCTCCCACGCCGGATAAATCCCCCGCCGCGTCCTGAGCCCGACGGACCT
CTGTCCCGGTGCCGGCCTCGTACCCAAGCTGACGGCTTTCCTGCCACTGCCTTTTTTAGACCTCATCCCGACCGC
GCGACGAGATTGCTGGCCGCTTCAGCAGTCGACGCGGCCACGCGAGCCAGCTTTCCATCTCGGACCCAAGCCATC
ACGTTACGGAAGCCATCGGAACTCTCTACGGCGACGAGGATGATTCCGGCTCCGAGGGAGGACGGCCCCTGAGCT
TCATCGGCGGATCCCCACACAACGAGCAGATACAACGGACCAAGCTCCCGGACCTGGACGAACGACCCGAGTCCC
AGCACCACGCCGACGAGCCGTCGAGAAGGCCCTCAGTCCCGGACCAGCAGTCCGACCCCTCCCCCTTCCCAGCCG
ACCATGGCAGCCTCAGGAAGGCTCGCACCGCCCTCGTGACCAGCTCCTCGCAGCGAAGCACCAGCCCGTACGACC
ATGGCTCCAAGTCTCCCGCCTCTCCAACACTATCGCTCAGGGATGTGCAGGCAGACCCCACAGGCTCTCAGTTTC
CCTTGACAAACATCGACAATCCAAGCGACATCGCCCAGGAGCTGAGTAATCTGCAAGCCTTGAGGCGGCTCTCGA
TGGACGTCGGCAACAACATTGATCCTGATATGCCGCCTATGGGTCTGTCGGCCATGCCCGTGGTGGCTCCCAGTG
GAGATGACGACGAAAATGACCCCTCCCGGCTGCTCTGGGTCCCGGCGAGGGTCCACCCGGAGCTGGCGCCGACAG
AATTCAAGTCGTTCCTGGAGAAGCGCGTTCAATCGATCAGGCGCAGGTCCGGAGACCCCTTTCTCGCTGTTGATG
GCGACCCAGGCTGTGCCGGCCCAGAGCCGTCTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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