Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3755
Gene name
LocationContig_20:53298..53734
Strand-
Gene length (bp)436
Transcript length (bp)273
Coding sequence length (bp)273
Protein length (aa) 91

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.4968 0.2591 0.1834 0.3356 0.5422 0.1204 0.4196 0.1323 0.153 0.0467

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2540
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|892
Ophiocordyceps australis map64 (Brazil) OphauB2|3482
Ophiocordyceps camponoti-floridani Ophcf2|04550
Ophiocordyceps camponoti-rufipedis Ophun1|6920
Ophiocordyceps kimflemingae Ophio5|7152
Ophiocordyceps subramaniannii Hirsu2|3755 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3755
MADKSSQQPGLVASHAQYAKGVVESAIGDVTGSQPWKDSGEKGKAAAGEAMKKAGEARDSAAQGYGKAEEVAGKL
AGCEGMQKEGSVSKD*
Coding >Hirsu2|3755
ATGGCCGACAAGAGCTCGCAGCAGCCCGGCCTCGTGGCCAGCCACGCCCAGTATGCCAAGGGCGTTGTCGAGTCT
GCAATCGGCGACGTCACCGGCTCTCAGCCGTGGAAGGACTCGGGCGAGAAGGGCAAGGCCGCTGCGGGCGAGGCC
ATGAAGAAGGCAGGCGAGGCGCGGGACTCGGCGGCGCAGGGCTACGGCAAGGCCGAGGAGGTCGCGGGCAAGCTT
GCGGGGTGCGAGGGCATGCAGAAGGAGGGCTCCGTCAGCAAGGACTGA
Transcript >Hirsu2|3755
ATGGCCGACAAGAGCTCGCAGCAGCCCGGCCTCGTGGCCAGCCACGCCCAGTATGCCAAGGGCGTTGTCGAGTCT
GCAATCGGCGACGTCACCGGCTCTCAGCCGTGGAAGGACTCGGGCGAGAAGGGCAAGGCCGCTGCGGGCGAGGCC
ATGAAGAAGGCAGGCGAGGCGCGGGACTCGGCGGCGCAGGGCTACGGCAAGGCCGAGGAGGTCGCGGGCAAGCTT
GCGGGGTGCGAGGGCATGCAGAAGGAGGGCTCCGTCAGCAAGGACTGA
Gene >Hirsu2|3755
ATGGCCGACAAGAGCTCGCAGCAGCCCGGCCTCGTGGCCAGCCACGCCCAGTATGCCAAGGGCGTTGTCGAGGTG
AGTCTGCTGCCGTCTGCGCCCGAGAATCAGCTGTCATTCTCTTTTCTCTCTTTCTCTCTCTCTCTCTTTTGCGGA
GACTTCCTGCCTGCTATGTCTTCTCCCCGCCCCCCAGCGTTTTGAACATGGCGCATTCTGACCACTTTCGCCCTC
CGGCCCCCAGTCTGCAATCGGCGACGTCACCGGCTCTCAGCCGTGGAAGGACTCGGGCGAGAAGGGCAAGGCCGC
TGCGGGCGAGGCCATGAAGAAGGCAGGCGAGGCGCGGGACTCGGCGGCGCAGGGCTACGGCAAGGCCGAGGAGGT
CGCGGGCAAGCTTGCGGGGTGCGAGGGCATGCAGAAGGAGGGCTCCGTCAGCAAGGACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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