Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3754
Gene name
LocationContig_20:51091..52420
Strand-
Gene length (bp)1329
Transcript length (bp)996
Coding sequence length (bp)996
Protein length (aa) 332

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 41 60 19
2 80 102 22
3 136 158 22
4 210 232 22
5 239 261 22
6 284 306 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3754
MSSTPLLSAAGGLPGPNVMQDHPAFLRVSHSPWGFIPQNVLVALRGIVLAYLTATAFMIGHHKLTEESEVGQIRH
LFDFGLISYGMVTLYHLMTFCWTFTHLYYPDADAIRGGVESLLVRAMSLPSNMGSLRKQFYFTLFYAVTTVFSFM
NTAIYWSVTRPHEGGGAGEALLMAAAASDVPTGLGEVASSSTMTTIEGPFSDLFGEGWFTVFVLCNLYGVTSGFM
VFETLFLNSTKRPIAIGSHFFGVMFHAGLYLAWAAAGKALTDAFPFFWLDEAEVGSKEAVTAYCMGFVLLSPIMY
TLMLGFVGIREGLTRPGSEQAVGEAREDVDN*
Coding >Hirsu2|3754
ATGTCGTCGACGCCTCTTCTCTCCGCTGCCGGCGGCCTTCCTGGGCCCAATGTGATGCAGGACCATCCTGCCTTT
CTCCGAGTCAGCCATTCGCCATGGGGATTCATCCCCCAGAATGTCCTCGTCGCTCTGCGAGGCATCGTCTTGGCC
TACCTGACGGCCACGGCTTTCATGATTGGCCACCACAAGCTCACCGAGGAGTCGGAGGTGGGCCAGATCCGGCAC
CTTTTTGACTTCGGCCTGATCAGCTACGGCATGGTGACGCTGTATCACCTCATGACCTTTTGTTGGACCTTTACG
CACCTGTACTACCCCGATGCCGACGCCATCCGAGGCGGTGTTGAGTCGCTGCTGGTCCGCGCCATGTCTCTTCCC
AGCAACATGGGCAGCCTACGCAAGCAGTTCTACTTCACCTTGTTCTACGCAGTCACCACTGTCTTCTCCTTCATG
AACACGGCCATCTACTGGTCGGTAACCCGCCCGCATGAGGGAGGCGGCGCCGGTGAGGCACTCTTGATGGCGGCT
GCGGCAAGCGACGTGCCGACTGGGCTGGGCGAGGTTGCGAGCAGCTCGACCATGACTACGATTGAGGGGCCTTTC
AGCGATCTCTTCGGCGAGGGATGGTTCACCGTCTTCGTCCTTTGCAACCTGTACGGAGTCACGTCGGGCTTCATG
GTCTTCGAGACGCTGTTCCTCAATAGCACCAAGCGGCCCATTGCCATCGGATCGCACTTCTTTGGCGTCATGTTC
CATGCGGGCCTCTACCTCGCTTGGGCCGCGGCAGGAAAGGCCCTGACGGACGCGTTTCCCTTCTTCTGGCTTGAC
GAGGCCGAGGTTGGCTCCAAGGAGGCCGTGACCGCCTACTGCATGGGCTTCGTGCTCCTGTCGCCGATCATGTAC
ACGCTGATGCTCGGCTTCGTGGGCATCCGCGAGGGCTTGACGCGCCCCGGGTCGGAGCAAGCCGTCGGCGAGGCA
CGTGAAGACGTGGACAATTGA
Transcript >Hirsu2|3754
ATGTCGTCGACGCCTCTTCTCTCCGCTGCCGGCGGCCTTCCTGGGCCCAATGTGATGCAGGACCATCCTGCCTTT
CTCCGAGTCAGCCATTCGCCATGGGGATTCATCCCCCAGAATGTCCTCGTCGCTCTGCGAGGCATCGTCTTGGCC
TACCTGACGGCCACGGCTTTCATGATTGGCCACCACAAGCTCACCGAGGAGTCGGAGGTGGGCCAGATCCGGCAC
CTTTTTGACTTCGGCCTGATCAGCTACGGCATGGTGACGCTGTATCACCTCATGACCTTTTGTTGGACCTTTACG
CACCTGTACTACCCCGATGCCGACGCCATCCGAGGCGGTGTTGAGTCGCTGCTGGTCCGCGCCATGTCTCTTCCC
AGCAACATGGGCAGCCTACGCAAGCAGTTCTACTTCACCTTGTTCTACGCAGTCACCACTGTCTTCTCCTTCATG
AACACGGCCATCTACTGGTCGGTAACCCGCCCGCATGAGGGAGGCGGCGCCGGTGAGGCACTCTTGATGGCGGCT
GCGGCAAGCGACGTGCCGACTGGGCTGGGCGAGGTTGCGAGCAGCTCGACCATGACTACGATTGAGGGGCCTTTC
AGCGATCTCTTCGGCGAGGGATGGTTCACCGTCTTCGTCCTTTGCAACCTGTACGGAGTCACGTCGGGCTTCATG
GTCTTCGAGACGCTGTTCCTCAATAGCACCAAGCGGCCCATTGCCATCGGATCGCACTTCTTTGGCGTCATGTTC
CATGCGGGCCTCTACCTCGCTTGGGCCGCGGCAGGAAAGGCCCTGACGGACGCGTTTCCCTTCTTCTGGCTTGAC
GAGGCCGAGGTTGGCTCCAAGGAGGCCGTGACCGCCTACTGCATGGGCTTCGTGCTCCTGTCGCCGATCATGTAC
ACGCTGATGCTCGGCTTCGTGGGCATCCGCGAGGGCTTGACGCGCCCCGGGTCGGAGCAAGCCGTCGGCGAGGCA
CGTGAAGACGTGGACAATTGA
Gene >Hirsu2|3754
ATGTCGTCGACGCCTCTTCTCTCCGCTGCCGGCGGCCTTCCTGGGCCCAATGTGATGCAGGACCATGTGAGTGGC
CCTGTGACTCGCCTCTCTCTGCCACTGCTGACTTGTGACGCTCTTGATAGCCTGCCTTTCTCCGAGTCAGCCATT
CGCCATGGGGATTCATCCCCCAGAATGTCCTCGTCGCTCTGCGAGGCATCGTCTTGGCCTACCTGACGGCCACGG
CTTTCATGATTGGCCACCACAAGCTCACCGAGGAGTCGGAGGTGGGCCAGATCCGGCACCTTTTTGACTTCGGCC
TGATCAGCTACGGCATGGTGACGCTGTATCACCTCATGACCTTTGTAAGTCACCCCGGCCCCCCCTCGACCCGGT
GCCCTGGCGACGATGGGACGCTGACGAGAAGCAGTGTTGGACCTTTACGCACCTGTACTACCCCGATGCCGACGC
CATCCGAGGCGGTGTTGAGTCGCTGCTGGTCCGCGCCATGTCTCTTCCCAGCAACATGGGCAGCCTACGCAAGCA
GTTCTACTTCACCTTGTTCTACGCAGTCACCACTGTCTTCTCCTTCATGAACACGGCCATCTACTGGTCGGTAAC
CCGCCCGCATGAGGGAGGCGGCGCCGGTGAGGCACTCTTGATGGCGGCTGCGGCAAGCGACGTGCCGACTGGGCT
GGGCGAGGTTGCGAGCAGCTCGACCATGACTACGATTGAGGGGCCTTGTAAGTCTGCTACTACTCTTGCCCCTTG
TCTGCTGTCACATGGTTTACGGCGCTGACGGGGACATGTAGTCAGCGATCTCTTCGGCGAGGGATGGTTCACCGT
CTTCGTCCTTTGCAACCTGTACGGAGTCACGTCGGGCTTCATGGTCTTCGAGACGCTGTTCCTCAATAGCACCAA
GCGGCCCATTGTGAGATTCCCCGCGGCGCCTGTCCCGCTCTTCCGGCCAGGGCGTGGCGCAGTGACTGACGGTTG
AACCCCTAGGCCATCGGATCGCACTTCTTTGGCGTCATGTTCCATGCGGGCCTCTACCTCGCTTGGGCCGCGGCA
GGAAAGGCCCTGACGGACGCGTTTCCCTTCTTCTGGCTTGACGAGGCCGAGGTTGGCTCCAAGGAGGCCGTGACC
GCCTACTGCATGGGCTTCGTGCTCCTGTCGCCGATCAGTGAGTTTGACTTGGACGAGGCGTGAGAACGTGATGGT
GACGCAGCTAACGCTTGACGGCGCGCAGTGTACACGCTGATGCTCGGCTTCGTGGGCATCCGCGAGGGCTTGACG
CGCCCCGGGTCGGAGCAAGCCGTCGGCGAGGCACGTGAAGACGTGGACAATTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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